RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 TBC1D10CQ8IV04 446 aa12.21□□□□□ -0.45
SF3B3-204ENST00000563739 RGS22Q8NE09 1264 aa12.21□□□□□ -0.45
SF3B3-204ENST00000563739 NACAP1Q9BZK3 213 aa12.21□□□□□ -0.45
SF3B3-204ENST00000563739 BCAS3Q9H6U6 928 aa12.21□□□□□ -0.45
SF3B3-204ENST00000563739 TCP11L1Q9NUJ3 509 aa12.21□□□□□ -0.45
SF3B3-204ENST00000563739 PLXNA4Q9HCM2 1894 aa12.21□□□□□ -0.46
SF3B3-204ENST00000563739 TBX10O75333 385 aa12.2□□□□□ -0.46
SF3B3-204ENST00000563739 GOLGA8HP0CJ92 632 aa12.2□□□□□ -0.46
SF3B3-204ENST00000563739 GTF2F1P35269 517 aaKnown RBP eCLIP12.2□□□□□ -0.46
SF3B3-204ENST00000563739 ALX1Q15699 326 aa12.2□□□□□ -0.46
SF3B3-204ENST00000563739 KIAA0753Q2KHM9 967 aa12.2□□□□□ -0.46
SF3B3-204ENST00000563739 USH1GQ495M9 461 aa12.2□□□□□ -0.46
SF3B3-204ENST00000563739 BRDTQ58F21 947 aaPredicted RBP12.2□□□□□ -0.46
SF3B3-204ENST00000563739 IER5LQ5T953 404 aa12.2□□□□□ -0.46
SF3B3-204ENST00000563739 CHST3Q7LGC8 479 aa12.2□□□□□ -0.46
SF3B3-204ENST00000563739 RPAINQ86UA6 219 aa12.2□□□□□ -0.46
SF3B3-204ENST00000563739 ADHFE1Q8IWW8 467 aa12.2□□□□□ -0.46
SF3B3-204ENST00000563739 IL31RAQ8NI17 732 aa12.2□□□□□ -0.46
SF3B3-204ENST00000563739 GPKOWQ92917 476 aaPredicted RBP eCLIP12.2□□□□□ -0.464e-7■□□□□ 8.7
SF3B3-204ENST00000563739 UIMC1Q96RL1 719 aa12.2□□□□□ -0.46
SF3B3-204ENST00000563739 ALG1Q9BT22 464 aa12.2□□□□□ -0.46
SF3B3-204ENST00000563739 KCNH6Q9H252 994 aa12.2□□□□□ -0.46
SF3B3-204ENST00000563739 TELO2Q9Y4R8 837 aa12.2□□□□□ -0.46
SF3B3-204ENST00000563739 VPS13AQ96RL7 3174 aa12.2□□□□□ -0.46
SF3B3-204ENST00000563739 NEDD4P46934 1319 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 TTC41PQ6P2S7 1318 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 A0A0D9SFI3 127 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 PARNO95453 639 aaKnown RBP12.19□□□□□ -0.46
SF3B3-204ENST00000563739 GHRHRQ02643 423 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 HYAL1Q12794 435 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 CAMK1Q14012 370 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 IKBKEQ14164 716 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 SLC35G1Q2M3R5 365 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 HSDL1Q3SXM5 330 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 TIGD5Q53EQ6 642 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 HERC4Q5GLZ8 1057 aaPredicted RBP12.19□□□□□ -0.46
SF3B3-204ENST00000563739 PPP4R3BQ5MIZ7 849 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 SEPT14Q6ZU15 432 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 ZNF589Q86UQ0 364 aaPredicted RBP12.19□□□□□ -0.46
SF3B3-204ENST00000563739 FBXO11Q86XK2 927 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 MYOCDQ8IZQ8 938 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 BANK1Q8NDB2 785 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 PPTC7Q8NI37 304 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 C16orf70Q9BSU1 422 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 FSD1Q9BTV5 496 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 UBA5Q9GZZ9 404 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 MUTYHQ9UIF7 546 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 INSL6Q9Y581 213 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 TTC3P53804 2025 aa12.19□□□□□ -0.46
SF3B3-204ENST00000563739 ZMYM6O95789 1325 aa12.18□□□□□ -0.46
SF3B3-204ENST00000563739 LINC01565O15544 149 aa12.18□□□□□ -0.46
SF3B3-204ENST00000563739 MBTPS2O43462 519 aa12.18□□□□□ -0.46
SF3B3-204ENST00000563739 PPP1R11O60927 126 aaPredicted RBP12.18□□□□□ -0.46
SF3B3-204ENST00000563739 EFCAB14O75071 495 aa12.18□□□□□ -0.46
SF3B3-204ENST00000563739 SLC3A2P08195 630 aaKnown RBP12.18□□□□□ -0.46
SF3B3-204ENST00000563739 SP2Q02086 613 aa12.18□□□□□ -0.46
SF3B3-204ENST00000563739 TCF15Q12870 199 aa12.18□□□□□ -0.46
SF3B3-204ENST00000563739 GPM6BQ13491 265 aa12.18□□□□□ -0.46
SF3B3-204ENST00000563739 SMAD2Q15796 467 aaKnown RBP12.18□□□□□ -0.46
SF3B3-204ENST00000563739 TMEM192Q8IY95 271 aa12.18□□□□□ -0.46
SF3B3-204ENST00000563739 TOP1MTQ969P6 601 aa12.18□□□□□ -0.46
SF3B3-204ENST00000563739 NSUN3Q9H649 340 aaKnown RBP12.18□□□□□ -0.46
SF3B3-204ENST00000563739 PRKAG3Q9UGI9 489 aa12.18□□□□□ -0.46
SF3B3-204ENST00000563739 LOXHD1Q8IVV2 1947 aa12.17□□□□□ -0.46
SF3B3-204ENST00000563739 ZFHX2Q9C0A1 2572 aaPredicted RBP12.17□□□□□ -0.46
SF3B3-204ENST00000563739 C5orf67F2Z3F1 127 aa12.17□□□□□ -0.46
SF3B3-204ENST00000563739 GRM6O15303 877 aa12.17□□□□□ -0.46
SF3B3-204ENST00000563739 SORBS3O60504 671 aa12.17□□□□□ -0.46
SF3B3-204ENST00000563739 FGAP02671 866 aa12.17□□□□□ -0.46
SF3B3-204ENST00000563739 MS4A1P11836 297 aa12.17□□□□□ -0.46
SF3B3-204ENST00000563739 EIF2AK2P19525 551 aaKnown RBP12.17□□□□□ -0.46
SF3B3-204ENST00000563739 CASTP20810 708 aaKnown RBP12.17□□□□□ -0.46
SF3B3-204ENST00000563739 CLUL1Q15846 466 aa12.17□□□□□ -0.46
SF3B3-204ENST00000563739 CDC37Q16543 378 aaPredicted RBP12.17□□□□□ -0.46
SF3B3-204ENST00000563739 DGKDQ16760 1214 aa12.17□□□□□ -0.46
SF3B3-204ENST00000563739 QRICH1Q2TAL8 776 aa12.17□□□□□ -0.46
SF3B3-204ENST00000563739 PUS10Q3MIT2 529 aaKnown RBP12.17□□□□□ -0.46
SF3B3-204ENST00000563739 MYSM1Q5VVJ2 828 aa12.17□□□□□ -0.46
SF3B3-204ENST00000563739 C7orf31Q8N865 590 aa12.17□□□□□ -0.46
SF3B3-204ENST00000563739 FAM227BQ96M60 508 aa12.17□□□□□ -0.46
SF3B3-204ENST00000563739 PXMP2Q9NR77 195 aa12.17□□□□□ -0.46
SF3B3-204ENST00000563739 TREHO43280 583 aa12.16□□□□□ -0.46
SF3B3-204ENST00000563739 UBA1P22314 1058 aaKnown RBP12.16□□□□□ -0.46
SF3B3-204ENST00000563739 HSD17B4P51659 736 aa12.16□□□□□ -0.46
SF3B3-204ENST00000563739 HAND2P61296 217 aa12.16□□□□□ -0.46
SF3B3-204ENST00000563739 ADAM17P78536 824 aa12.16□□□□□ -0.46
SF3B3-204ENST00000563739 RNF135Q8IUD6 432 aa12.16□□□□□ -0.46
SF3B3-204ENST00000563739 LINC01599Q8WXQ3 324 aa12.16□□□□□ -0.46
SF3B3-204ENST00000563739 MSLNLQ96KJ4 702 aa12.16□□□□□ -0.46
SF3B3-204ENST00000563739 SAMD11Q96NU1 681 aa12.16□□□□□ -0.46
SF3B3-204ENST00000563739 RMDN3Q96TC7 470 aa12.16□□□□□ -0.46
SF3B3-204ENST00000563739 CLDND1Q9NY35 253 aa12.16□□□□□ -0.46
SF3B3-204ENST00000563739 SUPT16HQ9Y5B9 1047 aaKnown RBP12.16□□□□□ -0.46
SF3B3-204ENST00000563739 PCDHB15Q9Y5E8 787 aa12.16□□□□□ -0.46
SF3B3-204ENST00000563739 ABCB11O95342 1321 aa12.15□□□□□ -0.46
SF3B3-204ENST00000563739 RSPH10B2B2RC85 870 aa12.15□□□□□ -0.46
SF3B3-204ENST00000563739 AMHP03971 560 aa12.15□□□□□ -0.46
SF3B3-204ENST00000563739 NR3C2P08235 984 aa12.15□□□□□ -0.46
SF3B3-204ENST00000563739 RSPH10BP0C881 870 aa12.15□□□□□ -0.46
SF3B3-204ENST00000563739 DNAJB1P25685 340 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms