RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 SH3GL2Q99962 352 aa13.99□□□□□ -0.17
CCDC187-201ENST00000563590 UBA5Q9GZZ9 404 aa13.99□□□□□ -0.17
CCDC187-201ENST00000563590 TBC1D7Q9P0N9 293 aa13.99□□□□□ -0.17
CCDC187-201ENST00000563590 ZNF233A6NK53 670 aa13.99□□□□□ -0.17
CCDC187-201ENST00000563590 ARID4AP29374 1257 aaPredicted RBP13.99□□□□□ -0.17
CCDC187-201ENST00000563590 MAGOHP61326 146 aaKnown RBP13.99□□□□□ -0.17
CCDC187-201ENST00000563590 ZBED6P86452 979 aa13.99□□□□□ -0.17
CCDC187-201ENST00000563590 AP1ARQ63HQ0 302 aa13.99□□□□□ -0.17
CCDC187-201ENST00000563590 DTHD1Q6ZMT9 781 aa13.99□□□□□ -0.17
CCDC187-201ENST00000563590 TGFBRAP1Q8WUH2 860 aa13.99□□□□□ -0.17
CCDC187-201ENST00000563590 MAGOHBQ96A72 148 aaKnown RBP13.99□□□□□ -0.17
CCDC187-201ENST00000563590 ZNF512BQ96KM6 892 aaPredicted RBP13.99□□□□□ -0.17
CCDC187-201ENST00000563590 GLI3P10071 1580 aa13.99□□□□□ -0.17
CCDC187-201ENST00000563590 ANO9A1A5B4 782 aa13.99□□□□□ -0.17
CCDC187-201ENST00000563590 FSBPO95073 299 aa13.99□□□□□ -0.17
CCDC187-201ENST00000563590 TNNC1P63316 161 aa13.99□□□□□ -0.17
CCDC187-201ENST00000563590 TFAP4Q01664 338 aa13.99□□□□□ -0.17
CCDC187-201ENST00000563590 NSMCE1Q8WV22 266 aa13.99□□□□□ -0.17
CCDC187-201ENST00000563590 ZBTB10Q96DT7 871 aa13.99□□□□□ -0.17
CCDC187-201ENST00000563590 STAMBPL1Q96FJ0 436 aa13.99□□□□□ -0.17
CCDC187-201ENST00000563590 LUC7LQ9NQ29 371 aaKnown RBP13.99□□□□□ -0.17
CCDC187-201ENST00000563590 SEPT11Q9NVA2 429 aaKnown RBP13.99□□□□□ -0.17
CCDC187-201ENST00000563590 A0A1W2PQC6 194 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 ADAMTS3O15072 1205 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 FAM107AO95990 144 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 TSPY3P0CV98 308 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 TSPY8P0CW00 308 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 VEGFAP15692 232 aaPredicted RBP13.98□□□□□ -0.17
CCDC187-201ENST00000563590 SLC8A1P32418 973 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 MEA1Q16626 185 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 ACCSLQ4AC99 568 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 DNAAF5Q86Y56 855 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 ADSSL1Q8N142 457 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 NLRP3Q96P20 1036 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 SPATS2LQ9NUQ6 558 aaKnown RBP13.98□□□□□ -0.17
CCDC187-201ENST00000563590 LRP6O75581 1613 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 PDS5AQ29RF7 1337 aaKnown RBP13.98□□□□□ -0.17
CCDC187-201ENST00000563590 USP17L3A6NCW0 530 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 USP17L4A6NCW7 530 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 NPY5RQ15761 445 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 PREPLQ4J6C6 727 aaPredicted RBP13.98□□□□□ -0.17
CCDC187-201ENST00000563590 USP17L1Q7RTZ2 530 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 CCDC50Q8IVM0 306 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 SGSM3Q96HU1 749 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 PLA2G12BQ9BX93 195 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 RNF41Q9H4P4 317 aaPredicted RBP13.98□□□□□ -0.17
CCDC187-201ENST00000563590 ZNF263O14978 683 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 PALMO75781 387 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 SLC1A4P43007 532 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 FUT2Q10981 343 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 SPTY2D1Q68D10 685 aaPredicted RBP13.98□□□□□ -0.17
CCDC187-201ENST00000563590 FUKQ8N0W3 1084 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 MMGT1Q8N4V1 131 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 SEC16BQ96JE7 1060 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 MCM8Q9UJA3 840 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 ATP8A1Q9Y2Q0 1164 aa13.98□□□□□ -0.17
CCDC187-201ENST00000563590 RASSF10A6NK89 507 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 SLCO1A2P46721 670 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 SEC23AQ15436 765 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 CLEC10AQ8IUN9 316 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 FAM114A1Q8IWE2 563 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 ENAHQ8N8S7 591 aaPredicted RBP13.97□□□□□ -0.17
CCDC187-201ENST00000563590 TNFRSF25Q93038 417 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 ELAC2Q9BQ52 826 aaKnown RBP13.97□□□□□ -0.17
CCDC187-201ENST00000563590 NUP58Q9BVL2 599 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.97□□□□□ -0.17
CCDC187-201ENST00000563590 SAMD15Q9P1V8 674 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 PPP1R12AO14974 1030 aaPredicted RBP13.97□□□□□ -0.17
CCDC187-201ENST00000563590 PRPF3O43395 683 aaKnown RBP13.97□□□□□ -0.17
CCDC187-201ENST00000563590 KIAA0753Q2KHM9 967 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 TPTE2Q6XPS3 522 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 CCDC25Q86WR0 208 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 GPCPD1Q9NPB8 672 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 NUP188Q5SRE5 1749 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 LRRC53A6NM62 1247 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 APBA3O96018 575 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 SRGNP10124 158 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 EEF1GP26641 437 aaKnown RBP13.97□□□□□ -0.17
CCDC187-201ENST00000563590 QPCTQ16769 361 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 INF2Q27J81 1249 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 LINC00116Q8NCU8 138 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 TCP11L1Q9NUJ3 509 aa13.97□□□□□ -0.17
CCDC187-201ENST00000563590 FNTAP49354 379 aa13.96□□□□□ -0.17
CCDC187-201ENST00000563590 C3orf67Q6ZVT6 689 aa13.96□□□□□ -0.17
CCDC187-201ENST00000563590 ADGRA1Q86SQ6 560 aa13.96□□□□□ -0.17
CCDC187-201ENST00000563590 CCDC155Q8N6L0 562 aa13.96□□□□□ -0.17
CCDC187-201ENST00000563590 PURBQ96QR8 312 aaKnown RBP13.96□□□□□ -0.17
CCDC187-201ENST00000563590 TTYH3Q9C0H2 523 aa13.96□□□□□ -0.17
CCDC187-201ENST00000563590 DDX47Q9H0S4 455 aaKnown RBP13.96□□□□□ -0.17
CCDC187-201ENST00000563590 ACTR5Q9H9F9 607 aaPredicted RBP13.96□□□□□ -0.17
CCDC187-201ENST00000563590 PPP1R1BQ9UD71 204 aaPredicted RBP13.96□□□□□ -0.17
CCDC187-201ENST00000563590 RTL9Q8NET4 1388 aa13.96□□□□□ -0.17
CCDC187-201ENST00000563590 HMGB1P1B2RPK0 211 aaPredicted RBP13.96□□□□□ -0.17
CCDC187-201ENST00000563590 NKRFO15226 690 aaKnown RBP eCLIP13.96□□□□□ -0.17
CCDC187-201ENST00000563590 DIAPH2O60879 1101 aa13.96□□□□□ -0.17
CCDC187-201ENST00000563590 SCTRP47872 440 aa13.96□□□□□ -0.17
CCDC187-201ENST00000563590 ADCY1Q08828 1119 aa13.96□□□□□ -0.17
CCDC187-201ENST00000563590 LRRC41Q15345 812 aa13.96□□□□□ -0.17
CCDC187-201ENST00000563590 KDM7AQ6ZMT4 941 aa13.96□□□□□ -0.17
CCDC187-201ENST00000563590 RUFY4Q6ZNE9 571 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms