RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 BAHD1Q8TBE0 780 aaPredicted RBP5.82□□□□□ -1.48
CDR2-203ENST00000563573 SSH1Q8WYL5 1049 aa5.82□□□□□ -1.48
CDR2-203ENST00000563573 PIGBQ92521 554 aa5.82□□□□□ -1.48
CDR2-203ENST00000563573 ARHGAP45Q92619 1136 aa5.82□□□□□ -1.48
CDR2-203ENST00000563573 SMARCC1Q92922 1105 aaPredicted RBP5.82□□□□□ -1.48
CDR2-203ENST00000563573 LRRC3Q9BY71 257 aa5.82□□□□□ -1.48
CDR2-203ENST00000563573 CHMP4BQ9H444 224 aaKnown RBP5.82□□□□□ -1.48
CDR2-203ENST00000563573 NOB1Q9ULX3 412 aaKnown RBP5.82□□□□□ -1.48
CDR2-203ENST00000563573 POLR3KQ9Y2Y1 108 aaPredicted RBP5.82□□□□□ -1.48
CDR2-203ENST00000563573 DOT1LQ8TEK3 1739 aa5.82□□□□□ -1.48
CDR2-203ENST00000563573 BRWD3Q6RI45 1802 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 RNF123Q5XPI4 1314 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 KCNQ3O43525 872 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 PLIN1O60240 522 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 GRIN3BO60391 1043 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 LRRN2O75325 713 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 STARD3NLO95772 234 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 KRT1P04264 644 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 FAM160A1Q05DH4 1040 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 KCNA10Q16322 511 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 CIAPIN1Q6FI81 312 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 RNF111Q6ZNA4 994 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 ATG14Q6ZNE5 492 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 KRT27Q7Z3Y8 459 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 NPM2Q86SE8 214 aaKnown RBP5.81□□□□□ -1.48
CDR2-203ENST00000563573 FTSJ3Q8IY81 847 aaKnown RBP5.81□□□□□ -1.48
CDR2-203ENST00000563573 BCL2L13Q9BXK5 485 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 KRTAP4-7Q9BYR0 210 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 API5Q9BZZ5 524 aaKnown RBP5.81□□□□□ -1.48
CDR2-203ENST00000563573 RNF32Q9H0A6 362 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 KCNQ5Q9NR82 932 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 PODXL2Q9NZ53 605 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 DBF4Q9UBU7 674 aaPredicted RBP5.81□□□□□ -1.48
CDR2-203ENST00000563573 YBX2Q9Y2T7 364 aaKnown RBP5.81□□□□□ -1.48
CDR2-203ENST00000563573 THSD7AQ9UPZ6 1657 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 SBF2Q86WG5 1849 aa5.81□□□□□ -1.48
CDR2-203ENST00000563573 PTPRCP08575 1304 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 TOGARAM1Q9Y4F4 1720 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 MRC1P22897 1456 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 NPIPB6E9PJ23 425 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 F6X3S4 739 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 TCERG1O14776 1098 aaKnown RBP5.8□□□□□ -1.48
CDR2-203ENST00000563573 PEX10O60683 326 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 ATE1O95260 518 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 DDX58O95786 925 aaKnown RBP5.8□□□□□ -1.48
CDR2-203ENST00000563573 ZSCAN22P10073 491 aaPredicted RBP5.8□□□□□ -1.48
CDR2-203ENST00000563573 RAG1P15918 1043 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 CCNFP41002 786 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 IRX6P78412 446 aaPredicted RBP5.8□□□□□ -1.48
CDR2-203ENST00000563573 KRT24Q2M2I5 525 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 ATF7IPQ6VMQ6 1270 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 ERMP1Q7Z2K6 904 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 C1QL4Q86Z23 238 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 DAGLBQ8NCG7 672 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 SYTL5Q8TDW5 730 aaPredicted RBP5.8□□□□□ -1.48
CDR2-203ENST00000563573 ZNF496Q96IT1 587 aaPredicted RBP5.8□□□□□ -1.48
CDR2-203ENST00000563573 KIF2CQ99661 725 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 CD320Q9NPF0 282 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 KBTBD4Q9NVX7 518 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 HYPKQ9NX55 129 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 GMIPQ9P107 970 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 ASAP1Q9ULH1 1129 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 BCL9O00512 1426 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 UBR2Q8IWV8 1755 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 SRCAPQ6ZRS2 3230 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 HEG1Q9ULI3 1381 aa5.8□□□□□ -1.48
CDR2-203ENST00000563573 SLC22A31A6NKX4 558 aa5.79□□□□□ -1.48
CDR2-203ENST00000563573 ETV2O00321 342 aaPredicted RBP5.79□□□□□ -1.48
CDR2-203ENST00000563573 KCNQ2O43526 872 aa5.79□□□□□ -1.48
CDR2-203ENST00000563573 SEMA7AO75326 666 aa5.79□□□□□ -1.48
CDR2-203ENST00000563573 GARTP22102 1010 aa5.79□□□□□ -1.48
CDR2-203ENST00000563573 TRHRP34981 398 aaPredicted RBP5.79□□□□□ -1.48
CDR2-203ENST00000563573 EIF4A3P38919 411 aaKnown RBP5.79□□□□□ -1.48
CDR2-203ENST00000563573 TEKQ02763 1124 aa5.79□□□□□ -1.48
CDR2-203ENST00000563573 NMIQ13287 307 aaPredicted RBP5.79□□□□□ -1.48
CDR2-203ENST00000563573 RGS22Q8NE09 1264 aa5.79□□□□□ -1.48
CDR2-203ENST00000563573 VWCEQ96DN2 955 aa5.79□□□□□ -1.48
CDR2-203ENST00000563573 SP110Q9HB58 689 aa5.79□□□□□ -1.48
CDR2-203ENST00000563573 DDX21Q9NR30 783 aaKnown RBP eCLIP5.79□□□□□ -1.48
CDR2-203ENST00000563573 RAPGEFL1Q9UHV5 662 aa5.79□□□□□ -1.48
CDR2-203ENST00000563573 SMG5Q9UPR3 1016 aaKnown RBP5.79□□□□□ -1.48
CDR2-203ENST00000563573 USP16Q9Y5T5 823 aa5.79□□□□□ -1.48
CDR2-203ENST00000563573 PAPPAQ13219 1627 aa5.78□□□□□ -1.48
CDR2-203ENST00000563573 LAMB4A4D0S4 1761 aa5.78□□□□□ -1.48
CDR2-203ENST00000563573 SSU72P8A0A1W2PR75 194 aa5.78□□□□□ -1.48
CDR2-203ENST00000563573 GREM1O60565 184 aa5.78□□□□□ -1.48
CDR2-203ENST00000563573 MYL6BP14649 208 aa5.78□□□□□ -1.48
CDR2-203ENST00000563573 ENDOUP21128 410 aaKnown RBP5.78□□□□□ -1.48
CDR2-203ENST00000563573 PCBP3P57721 371 aaKnown RBP5.78□□□□□ -1.48
CDR2-203ENST00000563573 LRRFIP1Q32MZ4 808 aaKnown RBP5.78□□□□□ -1.48
CDR2-203ENST00000563573 ARSHQ5FYA8 562 aa5.78□□□□□ -1.48
CDR2-203ENST00000563573 CDCP2Q5VXM1 449 aa5.78□□□□□ -1.48
CDR2-203ENST00000563573 HS2ST1Q7LGA3 356 aa5.78□□□□□ -1.48
CDR2-203ENST00000563573 REXO1Q8N1G1 1221 aaKnown RBP5.78□□□□□ -1.48
CDR2-203ENST00000563573 ZNF655Q8N720 491 aaPredicted RBP5.78□□□□□ -1.48
CDR2-203ENST00000563573 LINC01599Q8WXQ3 324 aa5.78□□□□□ -1.48
CDR2-203ENST00000563573 INTS4Q96HW7 963 aaKnown RBP5.78□□□□□ -1.48
CDR2-203ENST00000563573 CHPF2Q9P2E5 772 aa5.78□□□□□ -1.48
CDR2-203ENST00000563573 GPR160Q9UJ42 338 aa5.78□□□□□ -1.48
CDR2-203ENST00000563573 DDX19BQ9UMR2 479 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms