RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 TEX33O43247 280 aa10.52□□□□□ -0.73
LINC00838-201ENST00000562956 HSD17B4P51659 736 aa10.52□□□□□ -0.73
LINC00838-201ENST00000562956 TERF1P54274 439 aa10.52□□□□□ -0.73
LINC00838-201ENST00000562956 DMTNQ08495 405 aa10.52□□□□□ -0.73
LINC00838-201ENST00000562956 KIAA0895Q8NCT3 520 aa10.52□□□□□ -0.73
LINC00838-201ENST00000562956 CCDC47Q96A33 483 aaKnown RBP10.52□□□□□ -0.73
LINC00838-201ENST00000562956 SLC39A2Q9NP94 309 aa10.52□□□□□ -0.73
LINC00838-201ENST00000562956 HOMER2Q9NSB8 354 aa10.52□□□□□ -0.73
LINC00838-201ENST00000562956 COL20A1Q9P218 1284 aa10.52□□□□□ -0.73
LINC00838-201ENST00000562956 PPP2R3BQ9Y5P8 575 aa10.52□□□□□ -0.73
LINC00838-201ENST00000562956 POTEFA5A3E0 1075 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 POTEIP0CG38 1075 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 ALAS1P13196 640 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 SFPQP23246 707 aaKnown RBP eCLIP10.51□□□□□ -0.73
LINC00838-201ENST00000562956 HMGCS2P54868 508 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 GOLGA8FQ08AF8 430 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 GOLGA8DPQ0D2H9 430 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 MAPK8IP2Q13387 824 aaPredicted RBP10.51□□□□□ -0.73
LINC00838-201ENST00000562956 STIM1Q13586 685 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 MUM1L1Q5H9M0 696 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 POTEGQ6S5H5 508 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 POTEEQ6S8J3 1075 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 UNC13DQ70J99 1090 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 CATSPER3Q86XQ3 398 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 CCDC150Q8NCX0 1101 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 AS3MTQ9HBK9 375 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 ADD3Q9UEY8 706 aaKnown RBP10.51□□□□□ -0.73
LINC00838-201ENST00000562956 PVALEFA0A1B0GWK0 134 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 PSMA7O14818 248 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 SPATA31C1P0DKV0 1188 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 KRT31Q15323 416 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 TTI2Q6NXR4 508 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 CNNM4Q6P4Q7 775 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 IRF2BP1Q8IU81 584 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 EML1O00423 815 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 VWA5AO00534 786 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 SSBP05455 408 aaKnown RBP eCLIP10.51□□□□□ -0.73
LINC00838-201ENST00000562956 PLA2G4BP0C869 781 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 IDEP14735 1019 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 PSMC6P62333 389 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 TBX2Q13207 712 aaPredicted RBP10.51□□□□□ -0.73
LINC00838-201ENST00000562956 CEP55Q53EZ4 464 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 TCP11X2Q5H9J9 407 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 HAUS3Q68CZ6 603 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 SPECC1LQ69YQ0 1117 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 DNAJC19Q96DA6 116 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 ATG4CQ96DT6 458 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 DHTKD1Q96HY7 919 aaPredicted RBP10.51□□□□□ -0.73
LINC00838-201ENST00000562956 EHMT1Q9H9B1 1298 aa10.51□□□□□ -0.73
LINC00838-201ENST00000562956 ADARB2Q9NS39 739 aaKnown RBP10.51□□□□□ -0.73
LINC00838-201ENST00000562956 LIMA1Q9UHB6 759 aaKnown RBP10.51□□□□□ -0.73
LINC00838-201ENST00000562956 KCNJ18B7U540 433 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 MEIS1O00470 390 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 USP2O75604 605 aaPredicted RBP10.5□□□□□ -0.73
LINC00838-201ENST00000562956 KCNJ12Q14500 433 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 SUPT20HL1Q3ZLR7 823 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 CREBRFQ8IUR6 639 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 ERMNQ8TAM6 284 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 CTAGE1Q96RT6 745 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 DUSP9Q99956 384 aaKnown RBP10.5□□□□□ -0.73
LINC00838-201ENST00000562956 LRRC27Q9C0I9 530 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 NPHP3-ACAD11A0A0J9YXS1 232 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 LRRC10BA6NIK2 292 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 SLC26A4O43511 780 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 PSMD10O75832 226 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 ARP10275 920 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 RPA1P27694 616 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 EHHADHQ08426 723 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 C9orf131Q5VYM1 1079 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 ANKRD40Q6AI12 368 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 OTOP1Q7RTM1 612 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 MCF2L2Q86YR7 1114 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 GLIS3Q8NEA6 775 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.5□□□□□ -0.73
LINC00838-201ENST00000562956 IL31RAQ8NI17 732 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 P2RX5Q93086 422 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 EEF2KMTQ96G04 330 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 TRIM47Q96LD4 638 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 SRRTQ9BXP5 876 aaKnown RBP10.5□□□□□ -0.73
LINC00838-201ENST00000562956 DOCK1Q14185 1865 aa10.5□□□□□ -0.73
LINC00838-201ENST00000562956 PITPNM2Q9BZ72 1349 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 ADM5C9JUS6 153 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 ZBED4O75132 1171 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 CCNE1P24864 410 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 SLC12A3P55017 1021 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 CYP4A11Q02928 519 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 PDE4CQ08493 712 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 COBLL1Q53SF7 1204 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 NOL9Q5SY16 702 aaKnown RBP10.49□□□□□ -0.73
LINC00838-201ENST00000562956 LRCH2Q5VUJ6 765 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 SLC5A5Q92911 643 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 C12orf42Q96LP6 360 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 EIF2AK1Q9BQI3 630 aaKnown RBP10.49□□□□□ -0.73
LINC00838-201ENST00000562956 SEMA6BQ9H3T3 888 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 TAB2Q9NYJ8 693 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 RIPK3Q9Y572 518 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 CTDP1Q9Y5B0 961 aaPredicted RBP10.49□□□□□ -0.73
LINC00838-201ENST00000562956 RPTORQ8N122 1335 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 DICER1Q9UPY3 1922 aaKnown RBP10.49□□□□□ -0.73
LINC00838-201ENST00000562956 CHMP2AO43633 222 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms