RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CCSER1Q9C0I3 900 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 PUF60Q9UHX1 559 aaKnown RBP8.32□□□□□ -1.08
TCF4-216ENST00000562680 WDR64B1ANS9 1081 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 KCNJ18B7U540 433 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 CCNE1P24864 410 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 STAT3P40763 770 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 KCNJ12Q14500 433 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 SNRNP48Q6IEG0 339 aaKnown RBP8.32□□□□□ -1.08
TCF4-216ENST00000562680 LDHDQ86WU2 507 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 RETREG2Q8NC44 543 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 SELENOOQ9BVL4 669 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 MXD3Q9BW11 206 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 HPS5Q9UPZ3 1129 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 TRPC6Q9Y210 931 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 ZDHHC9Q9Y397 364 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 PKD1L3Q7Z443 1732 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 GOLGA6L10A0A0M3HER8 536 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 POLGP54098 1239 aaPredicted RBP8.32□□□□□ -1.08
TCF4-216ENST00000562680 FKBP3Q00688 224 aaKnown RBP8.32□□□□□ -1.08
TCF4-216ENST00000562680 LRRC63Q05C16 580 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 ANKRD13AQ8IZ07 590 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 STAG2Q8N3U4 1231 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 P2RX5Q93086 422 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 TAB2Q9NYJ8 693 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 MAPK8IP1Q9UQF2 711 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 LTBP4Q8N2S1 1624 aa8.32□□□□□ -1.08
TCF4-216ENST00000562680 K7ENM7 598 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 KIF3CO14782 793 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 PLCG1P19174 1290 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 PRELPP51888 382 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 NEDD9Q14511 834 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 GMCL1P1Q8NEA9 526 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 PRMT6Q96LA8 375 aaPredicted RBP8.31□□□□□ -1.08
TCF4-216ENST00000562680 PPP1R9BQ96SB3 815 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 RWDD2AQ9UIY3 292 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 PLA2G4BP0C869 781 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 CAP2P40123 477 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 TRPC3Q13507 836 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 FAM102BQ5T8I3 360 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 POTEAQ6S8J7 498 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 MCPH1Q8NEM0 835 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 FERMT1Q9BQL6 677 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 AP5M1Q9H0R1 490 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 SEL1LQ9UBV2 794 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 IVLP07476 585 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 KRT9P35527 623 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 CYP4A11Q02928 519 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 ASIC2Q16515 512 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 ODR4Q5SWX8 454 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 MOXD1Q6UVY6 613 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 UNC13DQ70J99 1090 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 NELFCDQ8IXH7 590 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 PAGE5Q96GU1 130 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 ADPGKQ9BRR6 497 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 TMX1Q9H3N1 280 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 RPAP3Q9H6T3 665 aaPredicted RBP8.31□□□□□ -1.08
TCF4-216ENST00000562680 ZNF215Q9UL58 517 aaPredicted RBP8.31□□□□□ -1.08
TCF4-216ENST00000562680 SLC25A27O95847 323 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 EIF2AK2P19525 551 aaKnown RBP8.31□□□□□ -1.08
TCF4-216ENST00000562680 RAPGEF1Q13905 1077 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 RPUSD2Q8IZ73 545 aaKnown RBP8.31□□□□□ -1.08
TCF4-216ENST00000562680 FMR1NBQ8N0W7 255 aaPredicted RBP8.31□□□□□ -1.08
TCF4-216ENST00000562680 CALR3Q96L12 384 aaKnown RBP8.31□□□□□ -1.08
TCF4-216ENST00000562680 FTOQ9C0B1 505 aaKnown RBP eCLIP8.31□□□□□ -1.08
TCF4-216ENST00000562680 PRR12Q9ULL5 1215 aa8.31□□□□□ -1.08
TCF4-216ENST00000562680 FSD2A1L4K1 749 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 VIL1P09327 827 aaKnown RBP8.3□□□□□ -1.08
TCF4-216ENST00000562680 P4HA1P13674 534 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 LIG4P49917 911 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 ELOA2Q8IYF1 753 aaPredicted RBP8.3□□□□□ -1.08
TCF4-216ENST00000562680 GPC2Q8N158 579 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 MIPOL1Q8TD10 442 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 ACCSQ96QU6 501 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 XPO4Q9C0E2 1151 aaKnown RBP8.3□□□□□ -1.08
TCF4-216ENST00000562680 SYNCQ9H7C4 482 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 PARVGQ9HBI0 331 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 MAN1B1Q9UKM7 699 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 ASB14A6NK59 587 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 STXBP3O00186 592 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 ZEB2O60315 1214 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 NEBLO76041 1014 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 MTMR1Q13613 665 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 RBBP5Q15291 538 aaKnown RBP8.3□□□□□ -1.08
TCF4-216ENST00000562680 ICE2Q659A1 982 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 SEPT14Q6ZU15 432 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 CEP112Q8N8E3 955 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 OR8K1Q8NGG5 319 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 OXER1Q8TDS5 423 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 DDX12PQ92771 950 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 NOX5Q96PH1 765 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 CAMKK2Q96RR4 588 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 BPIFA3Q9BQP9 254 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 TIPINQ9BVW5 301 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 RAVER2Q9HCJ3 691 aaKnown RBP8.3□□□□□ -1.08
TCF4-216ENST00000562680 AFDNP55196 1824 aaKnown RBP8.3□□□□□ -1.08
TCF4-216ENST00000562680 CTAGE9A4FU28 777 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 MAFGO15525 162 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 CHRM1P11229 460 aaPredicted RBP8.3□□□□□ -1.08
TCF4-216ENST00000562680 SNAPC2Q13487 334 aa8.3□□□□□ -1.08
TCF4-216ENST00000562680 GBP6Q6ZN66 633 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms