RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 MDM2Q00987 491 aaPredicted RBP17.63■□□□□ 0.41
CCNDBP1-203ENST00000562553 FAAP100Q0VG06 881 aa17.63■□□□□ 0.41
CCNDBP1-203ENST00000562553 ITGA7Q13683 1181 aa17.63■□□□□ 0.41
CCNDBP1-203ENST00000562553 SLC43A3Q8NBI5 491 aa17.63■□□□□ 0.41
CCNDBP1-203ENST00000562553 PPP1R13LQ8WUF5 828 aa17.63■□□□□ 0.41
CCNDBP1-203ENST00000562553 EMID1Q96A84 441 aaPredicted RBP17.63■□□□□ 0.41
CCNDBP1-203ENST00000562553 VPS54Q9P1Q0 977 aa17.63■□□□□ 0.41
CCNDBP1-203ENST00000562553 ESYT2A0FGR8 921 aa17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 CPLX1O14810 134 aa17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 PFKFB2O60825 505 aa17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 STAM2O75886 525 aa17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 ITGB8P26012 769 aa17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 ICAM3P32942 547 aa17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 NEK4P51957 841 aa17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 GNPTABQ3T906 1256 aa17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 BRDTQ58F21 947 aaPredicted RBP17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 CELF3Q5SZQ8 465 aaKnown RBP17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 MYSM1Q5VVJ2 828 aa17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 XRRA1Q6P2D8 792 aa17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 KCNV1Q6PIU1 500 aa17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 FAM126BQ8IXS8 530 aa17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 DHX37Q8IY37 1157 aaKnown RBP17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 TOX2Q96NM4 488 aa17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 MTG1Q9BT17 334 aaPredicted RBP17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 ANO3Q9BYT9 981 aa17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 UBE2OQ9C0C9 1292 aaKnown RBP17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 ZMYND12Q9H0C1 365 aa17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 SLKQ9H2G2 1235 aaPredicted RBP17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 PRKAG2Q9UGJ0 569 aa17.62■□□□□ 0.41
CCNDBP1-203ENST00000562553 DCDC2CA8MYV0 355 aa17.61■□□□□ 0.41
CCNDBP1-203ENST00000562553 SPATA31C2B4DYI2 1134 aa17.61■□□□□ 0.41
CCNDBP1-203ENST00000562553 FIBPO43427 364 aa17.61■□□□□ 0.41
CCNDBP1-203ENST00000562553 TGFB3P10600 412 aa17.61■□□□□ 0.41
CCNDBP1-203ENST00000562553 ITGB5P18084 799 aa17.61■□□□□ 0.41
CCNDBP1-203ENST00000562553 SSRP1Q08945 709 aaKnown RBP17.61■□□□□ 0.41
CCNDBP1-203ENST00000562553 LAMC2Q13753 1193 aa17.61■□□□□ 0.41
CCNDBP1-203ENST00000562553 ANKRD1Q15327 319 aa17.61■□□□□ 0.41
CCNDBP1-203ENST00000562553 JAKMIP3Q5VZ66 844 aa17.61■□□□□ 0.41
CCNDBP1-203ENST00000562553 TRIM22Q8IYM9 498 aa17.61■□□□□ 0.41
CCNDBP1-203ENST00000562553 PPTC7Q8NI37 304 aa17.61■□□□□ 0.41
CCNDBP1-203ENST00000562553 AIFM3Q96NN9 605 aa17.61■□□□□ 0.41
CCNDBP1-203ENST00000562553 KIF2CQ99661 725 aa17.61■□□□□ 0.41
CCNDBP1-203ENST00000562553 UBIAD1Q9Y5Z9 338 aa17.61■□□□□ 0.41
CCNDBP1-203ENST00000562553 MROH7Q68CQ1 1323 aa17.61■□□□□ 0.41
CCNDBP1-203ENST00000562553 COL6A3P12111 3177 aa17.61■□□□□ 0.41
CCNDBP1-203ENST00000562553 KIAA0355O15063 1070 aa17.6■□□□□ 0.41
CCNDBP1-203ENST00000562553 AP3B2Q13367 1082 aa17.6■□□□□ 0.41
CCNDBP1-203ENST00000562553 ME3Q16798 604 aa17.6■□□□□ 0.41
CCNDBP1-203ENST00000562553 HSDL1Q3SXM5 330 aa17.6■□□□□ 0.41
CCNDBP1-203ENST00000562553 TEX2Q8IWB9 1127 aa17.6■□□□□ 0.41
CCNDBP1-203ENST00000562553 RASGRP4Q8TDF6 673 aa17.6■□□□□ 0.41
CCNDBP1-203ENST00000562553 CCDC12Q8WUD4 166 aaPredicted RBP17.6■□□□□ 0.41
CCNDBP1-203ENST00000562553 KAT2BQ92831 832 aa17.6■□□□□ 0.41
CCNDBP1-203ENST00000562553 SPATA33Q96N06 139 aa17.6■□□□□ 0.41
CCNDBP1-203ENST00000562553 GLT8D2Q9H1C3 349 aa17.6■□□□□ 0.41
CCNDBP1-203ENST00000562553 EHMT1Q9H9B1 1298 aa17.6■□□□□ 0.41
CCNDBP1-203ENST00000562553 TMEM39AQ9NV64 488 aa17.6■□□□□ 0.41
CCNDBP1-203ENST00000562553 TBX21Q9UL17 535 aa17.6■□□□□ 0.41
CCNDBP1-203ENST00000562553 TELO2Q9Y4R8 837 aa17.6■□□□□ 0.41
CCNDBP1-203ENST00000562553 KPNA6O60684 536 aa17.59■□□□□ 0.41
CCNDBP1-203ENST00000562553 DEXIO95424 95 aa17.59■□□□□ 0.41
CCNDBP1-203ENST00000562553 CTDNEP1O95476 244 aa17.59■□□□□ 0.41
CCNDBP1-203ENST00000562553 FOSP01100 380 aaPredicted RBP17.59■□□□□ 0.41
CCNDBP1-203ENST00000562553 CD4P01730 458 aa17.59■□□□□ 0.41
CCNDBP1-203ENST00000562553 ZNF286BP0CG31 522 aa17.59■□□□□ 0.41
CCNDBP1-203ENST00000562553 DGKDQ16760 1214 aa17.59■□□□□ 0.41
CCNDBP1-203ENST00000562553 NBPF20Q3BBV1 942 aa17.59■□□□□ 0.41
CCNDBP1-203ENST00000562553 CPLX2Q6PUV4 134 aaKnown RBP17.59■□□□□ 0.41
CCNDBP1-203ENST00000562553 NLRX1Q86UT6 975 aa17.59■□□□□ 0.41
CCNDBP1-203ENST00000562553 NECAB1Q8N987 351 aa17.59■□□□□ 0.41
CCNDBP1-203ENST00000562553 CCDC148Q8NFR7 591 aa17.59■□□□□ 0.41
CCNDBP1-203ENST00000562553 BADQ92934 168 aa17.59■□□□□ 0.41
CCNDBP1-203ENST00000562553 GPRASP2Q96D09 838 aa17.59■□□□□ 0.41
CCNDBP1-203ENST00000562553 C22orf23Q9BZE7 217 aa17.59■□□□□ 0.41
CCNDBP1-203ENST00000562553 MLXIPQ9HAP2 919 aa17.59■□□□□ 0.41
CCNDBP1-203ENST00000562553 C6orf50Q9HD87 102 aa17.59■□□□□ 0.41
CCNDBP1-203ENST00000562553 LAMA2P24043 3122 aaKnown RBP17.58■□□□□ 0.4
CCNDBP1-203ENST00000562553 B4GALT4O60513 344 aa17.58■□□□□ 0.4
CCNDBP1-203ENST00000562553 ATP9AO75110 1047 aa17.58■□□□□ 0.4
CCNDBP1-203ENST00000562553 HOXD8P13378 290 aaPredicted RBP17.58■□□□□ 0.4
CCNDBP1-203ENST00000562553 SREBF1P36956 1147 aa17.58■□□□□ 0.4
CCNDBP1-203ENST00000562553 CHMP4BP1P59074 171 aa17.58■□□□□ 0.4
CCNDBP1-203ENST00000562553 CYFIP1Q7L576 1253 aa17.58■□□□□ 0.4
CCNDBP1-203ENST00000562553 REXO1Q8N1G1 1221 aaKnown RBP17.58■□□□□ 0.4
CCNDBP1-203ENST00000562553 CYP2W1Q8TAV3 490 aa17.58■□□□□ 0.4
CCNDBP1-203ENST00000562553 LBHD1Q9BQE6 289 aaPredicted RBP17.58■□□□□ 0.4
CCNDBP1-203ENST00000562553 TRPV6Q9H1D0 765 aa17.58■□□□□ 0.4
CCNDBP1-203ENST00000562553 JADE2Q9NQC1 790 aa17.58■□□□□ 0.4
CCNDBP1-203ENST00000562553 PKD2L1Q9P0L9 805 aa17.58■□□□□ 0.4
CCNDBP1-203ENST00000562553 TRIP12Q14669 1992 aaPredicted RBP17.58■□□□□ 0.4
CCNDBP1-203ENST00000562553 TLR3O15455 904 aaKnown RBP17.57■□□□□ 0.4
CCNDBP1-203ENST00000562553 KCNA2P16389 499 aa17.57■□□□□ 0.4
CCNDBP1-203ENST00000562553 GNA11P29992 359 aa17.57■□□□□ 0.4
CCNDBP1-203ENST00000562553 RBM25P49756 843 aaKnown RBP17.57■□□□□ 0.4
CCNDBP1-203ENST00000562553 ARHGAP4P98171 946 aa17.57■□□□□ 0.4
CCNDBP1-203ENST00000562553 ST3GAL1Q11201 340 aa17.57■□□□□ 0.4
CCNDBP1-203ENST00000562553 NEDD9Q14511 834 aa17.57■□□□□ 0.4
CCNDBP1-203ENST00000562553 FAM47CQ5HY64 1035 aa17.57■□□□□ 0.4
CCNDBP1-203ENST00000562553 METTL7BQ6UX53 244 aa17.57■□□□□ 0.4
CCNDBP1-203ENST00000562553 GTF3C6Q969F1 213 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms