RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 CLTBP09497 229 aa13.25□□□□□ -0.29
FANCA-209ENST00000562424 CDC27P30260 824 aa13.25□□□□□ -0.29
FANCA-209ENST00000562424 CPT1AP50416 773 aa13.25□□□□□ -0.29
FANCA-209ENST00000562424 MDM2Q00987 491 aaPredicted RBP13.25□□□□□ -0.29
FANCA-209ENST00000562424 APOBRQ0VD83 1088 aa13.25□□□□□ -0.29
FANCA-209ENST00000562424 SH3RF1Q7Z6J0 888 aa13.25□□□□□ -0.29
FANCA-209ENST00000562424 SLC43A3Q8NBI5 491 aa13.25□□□□□ -0.29
FANCA-209ENST00000562424 IL31RAQ8NI17 732 aa13.25□□□□□ -0.29
FANCA-209ENST00000562424 COPS5Q92905 334 aa13.25□□□□□ -0.29
FANCA-209ENST00000562424 BRF1Q92994 677 aa13.25□□□□□ -0.29
FANCA-209ENST00000562424 TRIM43Q96BQ3 446 aaPredicted RBP13.25□□□□□ -0.29
FANCA-209ENST00000562424 LBHD1Q9BQE6 289 aaPredicted RBP13.25□□□□□ -0.29
FANCA-209ENST00000562424 PRDM5Q9NQX1 630 aaPredicted RBP13.25□□□□□ -0.29
FANCA-209ENST00000562424 POLR3EQ9NVU0 708 aa13.25□□□□□ -0.29
FANCA-209ENST00000562424 NID2Q14112 1375 aa13.24□□□□□ -0.29
FANCA-209ENST00000562424 CCDC196A0A1B0GTZ2 297 aa13.24□□□□□ -0.29
FANCA-209ENST00000562424 C2orf72A6NCS6 295 aa13.24□□□□□ -0.29
FANCA-209ENST00000562424 KIAA0355O15063 1070 aa13.24□□□□□ -0.29
FANCA-209ENST00000562424 RGS20O76081 388 aa13.24□□□□□ -0.29
FANCA-209ENST00000562424 MYCLP12524 364 aaPredicted RBP13.24□□□□□ -0.29
FANCA-209ENST00000562424 CCND2P30279 289 aa13.24□□□□□ -0.29
FANCA-209ENST00000562424 METAP2P50579 478 aaKnown RBP eCLIP13.24□□□□□ -0.29
FANCA-209ENST00000562424 PURAQ00577 322 aaKnown RBP13.24□□□□□ -0.29
FANCA-209ENST00000562424 FAAP100Q0VG06 881 aa13.24□□□□□ -0.29
FANCA-209ENST00000562424 LY6KQ17RY6 165 aa13.24□□□□□ -0.29
FANCA-209ENST00000562424 BRDTQ58F21 947 aaPredicted RBP13.24□□□□□ -0.29
FANCA-209ENST00000562424 PPP1R15BQ5SWA1 713 aa13.24□□□□□ -0.29
FANCA-209ENST00000562424 USP17L6PQ6QN14 398 aa13.24□□□□□ -0.29
FANCA-209ENST00000562424 RUFY3Q7L099 469 aa13.24□□□□□ -0.29
FANCA-209ENST00000562424 SMARCC2Q8TAQ2 1214 aa13.24□□□□□ -0.29
FANCA-209ENST00000562424 KCNV2Q8TDN2 545 aa13.24□□□□□ -0.29
FANCA-209ENST00000562424 CUL5Q93034 780 aa13.24□□□□□ -0.29
FANCA-209ENST00000562424 SEZ6LQ9BYH1 1024 aa13.24□□□□□ -0.29
FANCA-209ENST00000562424 TM6SF1Q9BZW5 370 aa13.24□□□□□ -0.29
FANCA-209ENST00000562424 PSTPIP2Q9H939 334 aa13.24□□□□□ -0.29
FANCA-209ENST00000562424 ZSWIM6Q9HCJ5 1215 aa13.24□□□□□ -0.29
FANCA-209ENST00000562424 DDX41Q9UJV9 622 aaKnown RBP13.24□□□□□ -0.29
FANCA-209ENST00000562424 NAP1L2Q9ULW6 460 aaPredicted RBP13.24□□□□□ -0.29
FANCA-209ENST00000562424 DOCK5Q9H7D0 1870 aa13.24□□□□□ -0.29
FANCA-209ENST00000562424 GRIN2DO15399 1336 aa13.23□□□□□ -0.29
FANCA-209ENST00000562424 GH1P01241 217 aa13.23□□□□□ -0.29
FANCA-209ENST00000562424 ADD1P35611 737 aaKnown RBP13.23□□□□□ -0.29
FANCA-209ENST00000562424 ARHGAP1Q07960 439 aa13.23□□□□□ -0.29
FANCA-209ENST00000562424 ITGA7Q13683 1181 aa13.23□□□□□ -0.29
FANCA-209ENST00000562424 KCNV1Q6PIU1 500 aa13.23□□□□□ -0.29
FANCA-209ENST00000562424 HEATR3Q7Z4Q2 680 aa13.23□□□□□ -0.29
FANCA-209ENST00000562424 FAM126BQ8IXS8 530 aa13.23□□□□□ -0.29
FANCA-209ENST00000562424 GPKOWQ92917 476 aaPredicted RBP eCLIP13.23□□□□□ -0.29
FANCA-209ENST00000562424 TMEM39AQ9NV64 488 aa13.23□□□□□ -0.29
FANCA-209ENST00000562424 MRVI1Q9Y6F6 885 aa13.23□□□□□ -0.29
FANCA-209ENST00000562424 V9GY48 417 aaPredicted RBP13.23□□□□□ -0.29
FANCA-209ENST00000562424 hCG_1984214I3L0E3 225 aa13.22□□□□□ -0.29
FANCA-209ENST00000562424 TLR3O15455 904 aaKnown RBP13.22□□□□□ -0.29
FANCA-209ENST00000562424 KPNA6O60684 536 aa13.22□□□□□ -0.29
FANCA-209ENST00000562424 STAM2O75886 525 aa13.22□□□□□ -0.29
FANCA-209ENST00000562424 CD4P01730 458 aa13.22□□□□□ -0.29
FANCA-209ENST00000562424 MYL3P08590 195 aa13.22□□□□□ -0.29
FANCA-209ENST00000562424 TGFB3P10600 412 aa13.22□□□□□ -0.29
FANCA-209ENST00000562424 EVCP57679 992 aa13.22□□□□□ -0.29
FANCA-209ENST00000562424 PSMC6P62333 389 aa13.22□□□□□ -0.29
FANCA-209ENST00000562424 MRPS9P82933 396 aaKnown RBP13.22□□□□□ -0.29
FANCA-209ENST00000562424 DSG2Q14126 1118 aa13.22□□□□□ -0.29
FANCA-209ENST00000562424 NBR1Q14596 966 aa13.22□□□□□ -0.29
FANCA-209ENST00000562424 WWC2Q6AWC2 1192 aa13.22□□□□□ -0.29
FANCA-209ENST00000562424 FAM109BQ6ICB4 259 aaPredicted RBP13.22□□□□□ -0.29
FANCA-209ENST00000562424 ZNF713Q8N859 430 aaPredicted RBP13.22□□□□□ -0.29
FANCA-209ENST00000562424 AFG1LQ8WV93 481 aa13.22□□□□□ -0.29
FANCA-209ENST00000562424 BADQ92934 168 aa13.22□□□□□ -0.29
FANCA-209ENST00000562424 EMID1Q96A84 441 aaPredicted RBP13.22□□□□□ -0.29
FANCA-209ENST00000562424 MTG1Q9BT17 334 aaPredicted RBP13.22□□□□□ -0.29
FANCA-209ENST00000562424 TBX21Q9UL17 535 aa13.22□□□□□ -0.29
FANCA-209ENST00000562424 CYP46A1Q9Y6A2 500 aa13.22□□□□□ -0.29
FANCA-209ENST00000562424 MMP3P08254 477 aa13.21□□□□□ -0.29
FANCA-209ENST00000562424 RAG1P15918 1043 aa13.21□□□□□ -0.29
FANCA-209ENST00000562424 ITGB8P26012 769 aa13.21□□□□□ -0.29
FANCA-209ENST00000562424 NAPAP54920 295 aa13.21□□□□□ -0.29
FANCA-209ENST00000562424 FOXK1P85037 733 aa13.21□□□□□ -0.29
FANCA-209ENST00000562424 TOB2Q14106 344 aaPredicted RBP13.21□□□□□ -0.29
FANCA-209ENST00000562424 PCNX4Q63HM2 1172 aa13.21□□□□□ -0.29
FANCA-209ENST00000562424 TYW1BQ6NUM6 668 aa13.21□□□□□ -0.29
FANCA-209ENST00000562424 PPP1R18Q6NYC8 613 aa13.21□□□□□ -0.29
FANCA-209ENST00000562424 XRRA1Q6P2D8 792 aa13.21□□□□□ -0.29
FANCA-209ENST00000562424 TMEM92Q6UXU6 159 aa13.21□□□□□ -0.29
FANCA-209ENST00000562424 TEX2Q8IWB9 1127 aa13.21□□□□□ -0.29
FANCA-209ENST00000562424 INPP4AQ96PE3 977 aaPredicted RBP13.21□□□□□ -0.29
FANCA-209ENST00000562424 UPF3BQ9BZI7 483 aaKnown RBP13.21□□□□□ -0.29
FANCA-209ENST00000562424 BARHL2Q9NY43 387 aa13.21□□□□□ -0.29
FANCA-209ENST00000562424 STXBP3O00186 592 aa13.2□□□□□ -0.3
FANCA-209ENST00000562424 EIF5BO60841 1220 aaKnown RBP13.2□□□□□ -0.3
FANCA-209ENST00000562424 TIMP1P01033 207 aa13.2□□□□□ -0.3
FANCA-209ENST00000562424 UBA1P22314 1058 aaKnown RBP13.2□□□□□ -0.3
FANCA-209ENST00000562424 PDIA3P30101 505 aaKnown RBP13.2□□□□□ -0.3
FANCA-209ENST00000562424 ICAM3P32942 547 aa13.2□□□□□ -0.3
FANCA-209ENST00000562424 SP2Q02086 613 aa13.2□□□□□ -0.3
FANCA-209ENST00000562424 LAMC2Q13753 1193 aa13.2□□□□□ -0.3
FANCA-209ENST00000562424 UBE2SQ16763 222 aa13.2□□□□□ -0.3
FANCA-209ENST00000562424 PFKFB3Q16875 520 aaPredicted RBP13.2□□□□□ -0.3
FANCA-209ENST00000562424 GNPTABQ3T906 1256 aa13.2□□□□□ -0.3
FANCA-209ENST00000562424 CELF3Q5SZQ8 465 aaKnown RBP13.2□□□□□ -0.3
FANCA-209ENST00000562424 DHX37Q8IY37 1157 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms