RNA–Protein interactions for RNA: ENST00000562047.1

EDC3-203, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-203ENST00000562047 HIPK3Q9H422 1215 aa12.84□□□□□ -0.35
EDC3-203ENST00000562047 MLXIPQ9HAP2 919 aa12.84□□□□□ -0.35
EDC3-203ENST00000562047 ZSWIM6Q9HCJ5 1215 aa12.84□□□□□ -0.35
EDC3-203ENST00000562047 BARHL2Q9NY43 387 aa12.84□□□□□ -0.35
EDC3-203ENST00000562047 GRIN2DO15399 1336 aa12.84□□□□□ -0.35
EDC3-203ENST00000562047 CNTNAP5Q8WYK1 1306 aa12.84□□□□□ -0.35
EDC3-203ENST00000562047 KIAA1217Q5T5P2 1943 aa12.84□□□□□ -0.35
EDC3-203ENST00000562047 MAFGO15525 162 aa12.83□□□□□ -0.36
EDC3-203ENST00000562047 B4GALT4O60513 344 aa12.83□□□□□ -0.36
EDC3-203ENST00000562047 GGPS1O95749 300 aa12.83□□□□□ -0.36
EDC3-203ENST00000562047 CPA1P15085 419 aa12.83□□□□□ -0.36
EDC3-203ENST00000562047 ICAM3P32942 547 aa12.83□□□□□ -0.36
EDC3-203ENST00000562047 EVCP57679 992 aa12.83□□□□□ -0.36
EDC3-203ENST00000562047 FUT2Q10981 343 aa12.83□□□□□ -0.36
EDC3-203ENST00000562047 FAM47CQ5HY64 1035 aa12.83□□□□□ -0.36
EDC3-203ENST00000562047 MYSM1Q5VVJ2 828 aa12.83□□□□□ -0.36
EDC3-203ENST00000562047 MCTP2Q6DN12 878 aa12.83□□□□□ -0.36
EDC3-203ENST00000562047 IL31RAQ8NI17 732 aa12.83□□□□□ -0.36
EDC3-203ENST00000562047 SPATA33Q96N06 139 aa12.83□□□□□ -0.36
EDC3-203ENST00000562047 SENP7Q9BQF6 1050 aa12.83□□□□□ -0.36
EDC3-203ENST00000562047 TRPV6Q9H1D0 765 aa12.83□□□□□ -0.36
EDC3-203ENST00000562047 RIC8AQ9NPQ8 531 aa12.83□□□□□ -0.36
EDC3-203ENST00000562047 NOD1Q9Y239 953 aa12.83□□□□□ -0.36
EDC3-203ENST00000562047 hCG_1642624A0A1W2PR95 340 aa12.82□□□□□ -0.36
EDC3-203ENST00000562047 SPATA31C2B4DYI2 1134 aa12.82□□□□□ -0.36
EDC3-203ENST00000562047 NOP56O00567 594 aaKnown RBP12.82□□□□□ -0.36
EDC3-203ENST00000562047 HOXD8P13378 290 aaPredicted RBP12.82□□□□□ -0.36
EDC3-203ENST00000562047 UBA1P22314 1058 aaKnown RBP12.82□□□□□ -0.36
EDC3-203ENST00000562047 ITGB8P26012 769 aa12.82□□□□□ -0.36
EDC3-203ENST00000562047 CDC27P30260 824 aa12.82□□□□□ -0.36
EDC3-203ENST00000562047 ADD1P35611 737 aaKnown RBP12.82□□□□□ -0.36
EDC3-203ENST00000562047 ADCY7P51828 1080 aa12.82□□□□□ -0.36
EDC3-203ENST00000562047 ANAPC15P60006 121 aa12.82□□□□□ -0.36
EDC3-203ENST00000562047 MRPS9P82933 396 aaKnown RBP12.82□□□□□ -0.36
EDC3-203ENST00000562047 SHHQ15465 462 aa12.82□□□□□ -0.36
EDC3-203ENST00000562047 WWC2Q6AWC2 1192 aa12.82□□□□□ -0.36
EDC3-203ENST00000562047 METTL7BQ6UX53 244 aa12.82□□□□□ -0.36
EDC3-203ENST00000562047 SESTD1Q86VW0 696 aa12.82□□□□□ -0.36
EDC3-203ENST00000562047 CCDC155Q8N6L0 562 aa12.82□□□□□ -0.36
EDC3-203ENST00000562047 GPKOWQ92917 476 aaPredicted RBP eCLIP12.82□□□□□ -0.36
EDC3-203ENST00000562047 GPRASP2Q96D09 838 aa12.82□□□□□ -0.36
EDC3-203ENST00000562047 MTIF3Q9H2K0 278 aaKnown RBP12.82□□□□□ -0.36
EDC3-203ENST00000562047 FAM217BQ9NTX9 383 aaPredicted RBP12.82□□□□□ -0.36
EDC3-203ENST00000562047 RTEL1Q9NZ71 1219 aa12.82□□□□□ -0.36
EDC3-203ENST00000562047 LTBP2Q14767 1821 aa12.82□□□□□ -0.36
EDC3-203ENST00000562047 NID2Q14112 1375 aa12.81□□□□□ -0.36
EDC3-203ENST00000562047 SMCO2A6NFE2 343 aa12.81□□□□□ -0.36
EDC3-203ENST00000562047 PRPF3O43395 683 aaKnown RBP12.81□□□□□ -0.36
EDC3-203ENST00000562047 ABCB7O75027 752 aa12.81□□□□□ -0.36
EDC3-203ENST00000562047 SCG2P13521 617 aa12.81□□□□□ -0.36
EDC3-203ENST00000562047 SP2Q02086 613 aa12.81□□□□□ -0.36
EDC3-203ENST00000562047 AP3B2Q13367 1082 aa12.81□□□□□ -0.36
EDC3-203ENST00000562047 BFSP2Q13515 415 aa12.81□□□□□ -0.36
EDC3-203ENST00000562047 PFKFB3Q16875 520 aaPredicted RBP12.81□□□□□ -0.36
EDC3-203ENST00000562047 PSRC1Q6PGN9 363 aaPredicted RBP12.81□□□□□ -0.36
EDC3-203ENST00000562047 CPLX2Q6PUV4 134 aaKnown RBP12.81□□□□□ -0.36
EDC3-203ENST00000562047 RPUSD2Q8IZ73 545 aaKnown RBP12.81□□□□□ -0.36
EDC3-203ENST00000562047 C7orf31Q8N865 590 aa12.81□□□□□ -0.36
EDC3-203ENST00000562047 ZNF274Q96GC6 653 aaPredicted RBP12.81□□□□□ -0.36
EDC3-203ENST00000562047 RNPC3Q96LT9 517 aaKnown RBP12.81□□□□□ -0.36
EDC3-203ENST00000562047 NOC4LQ9BVI4 516 aaKnown RBP12.81□□□□□ -0.36
EDC3-203ENST00000562047 PPP1R12CQ9BZL4 782 aa12.81□□□□□ -0.36
EDC3-203ENST00000562047 PCDH10Q9P2E7 1040 aa12.81□□□□□ -0.36
EDC3-203ENST00000562047 PCDHA6Q9UN73 950 aa12.81□□□□□ -0.36
EDC3-203ENST00000562047 PCDHA8Q9Y5H6 950 aa12.81□□□□□ -0.36
EDC3-203ENST00000562047 SCN10AQ9Y5Y9 1956 aa12.81□□□□□ -0.36
EDC3-203ENST00000562047 STXBP3O00186 592 aa12.8□□□□□ -0.36
EDC3-203ENST00000562047 PITPNM1O00562 1244 aa12.8□□□□□ -0.36
EDC3-203ENST00000562047 CPLX1O14810 134 aa12.8□□□□□ -0.36
EDC3-203ENST00000562047 F2P00734 622 aa12.8□□□□□ -0.36
EDC3-203ENST00000562047 PFKMP08237 780 aa12.8□□□□□ -0.36
EDC3-203ENST00000562047 GNA11P29992 359 aa12.8□□□□□ -0.36
EDC3-203ENST00000562047 PDIA3P30101 505 aaKnown RBP12.8□□□□□ -0.36
EDC3-203ENST00000562047 CYP2C18P33260 490 aa12.8□□□□□ -0.36
EDC3-203ENST00000562047 CHMP4BP1P59074 171 aa12.8□□□□□ -0.36
EDC3-203ENST00000562047 MTMR1Q13613 665 aa12.8□□□□□ -0.36
EDC3-203ENST00000562047 UBE2SQ16763 222 aa12.8□□□□□ -0.36
EDC3-203ENST00000562047 IFNLR1Q8IU57 520 aaPredicted RBP12.8□□□□□ -0.36
EDC3-203ENST00000562047 TRIM22Q8IYM9 498 aa12.8□□□□□ -0.36
EDC3-203ENST00000562047 RETREG2Q8NC44 543 aa12.8□□□□□ -0.36
EDC3-203ENST00000562047 BICD2Q8TD16 824 aa12.8□□□□□ -0.36
EDC3-203ENST00000562047 RNF26Q9BY78 433 aaPredicted RBP12.8□□□□□ -0.36
EDC3-203ENST00000562047 C6orf50Q9HD87 102 aa12.8□□□□□ -0.36
EDC3-203ENST00000562047 IL23AQ9NPF7 189 aa12.8□□□□□ -0.36
EDC3-203ENST00000562047 PDRG1Q9NUG6 133 aa12.8□□□□□ -0.36
EDC3-203ENST00000562047 TRMT13Q9NUP7 481 aaKnown RBP12.8□□□□□ -0.36
EDC3-203ENST00000562047 COL6A3P12111 3177 aa12.79□□□□□ -0.36
EDC3-203ENST00000562047 ESYT2A0FGR8 921 aa12.79□□□□□ -0.36
EDC3-203ENST00000562047 SOX1O00570 391 aaPredicted RBP12.79□□□□□ -0.36
EDC3-203ENST00000562047 PARNO95453 639 aaKnown RBP12.79□□□□□ -0.36
EDC3-203ENST00000562047 CSF2RAP15509 400 aa12.79□□□□□ -0.36
EDC3-203ENST00000562047 IFNAR1P17181 557 aa12.79□□□□□ -0.36
EDC3-203ENST00000562047 PSEN2P49810 448 aa12.79□□□□□ -0.36
EDC3-203ENST00000562047 SMAD3P84022 425 aaKnown RBP12.79□□□□□ -0.36
EDC3-203ENST00000562047 MFSD10Q14728 455 aa12.79□□□□□ -0.36
EDC3-203ENST00000562047 ANKRD1Q15327 319 aa12.79□□□□□ -0.36
EDC3-203ENST00000562047 PTGISQ16647 500 aa12.79□□□□□ -0.36
EDC3-203ENST00000562047 KIAA0753Q2KHM9 967 aa12.79□□□□□ -0.36
EDC3-203ENST00000562047 HSDL1Q3SXM5 330 aa12.79□□□□□ -0.36
EDC3-203ENST00000562047 C9orf50Q5SZB4 431 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms