RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	GYS2	P54840	703 aa		5.52	□□□□□ -1.53
LRRC28-222	ENST00000561431	GABRE	P78334	506 aa		5.52	□□□□□ -1.53
LRRC28-222	ENST00000561431	TKFC	Q3LXA3	575 aa		5.52	□□□□□ -1.53
LRRC28-222	ENST00000561431	RTP2	Q5QGT7	225 aa		5.52	□□□□□ -1.53
LRRC28-222	ENST00000561431	HLA-DQA1	Q5Y7H0	255 aa		5.52	□□□□□ -1.53
LRRC28-222	ENST00000561431	IQCE	Q6IPM2	695 aa		5.52	□□□□□ -1.53
LRRC28-222	ENST00000561431	CYP2R1	Q6VVX0	501 aa		5.52	□□□□□ -1.53
LRRC28-222	ENST00000561431	CPNE8	Q86YQ8	564 aa		5.52	□□□□□ -1.53
LRRC28-222	ENST00000561431	DCAF4	Q8WV16	495 aa		5.52	□□□□□ -1.53
LRRC28-222	ENST00000561431	DIO2	Q92813	273 aa		5.52	□□□□□ -1.53
LRRC28-222	ENST00000561431	NCOA5	Q9HCD5	579 aa	Known RBP	5.52	□□□□□ -1.53
LRRC28-222	ENST00000561431	BTG4	Q9NY30	223 aa		5.52	□□□□□ -1.53
LRRC28-222	ENST00000561431	MAP3K1	Q13233	1512 aa		5.52	□□□□□ -1.53
LRRC28-222	ENST00000561431	MTUS2	Q5JR59	1369 aa		5.52	□□□□□ -1.53
LRRC28-222	ENST00000561431	SBNO2	Q9Y2G9	1366 aa		5.52	□□□□□ -1.53
LRRC28-222	ENST00000561431	NCOA2	Q15596	1464 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	LRRC9	Q6ZRR7	1453 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	C9orf84	Q5VXU9	1444 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431		A0A1W2PQJ5	194 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	PLD2	O14939	933 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	FGF10	O15520	208 aa	Predicted RBP	5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	SCG5	P05408	212 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	LTBR	P36941	435 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	KCNAB2	Q13303	367 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	CBX2	Q14781	532 aa	Predicted RBP	5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	ZNF662	Q6ZS27	426 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	MTDH	Q86UE4	582 aa	Known RBP	5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	FRS2	Q8WU20	508 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	COPS5	Q92905	334 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	PTPRN2	Q92932	1015 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	KISS1R	Q969F8	398 aa	Predicted RBP	5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	RELT	Q969Z4	430 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	CCDC120	Q96HB5	630 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	FCRL2	Q96LA5	508 aa	Predicted RBP	5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	ALPK1	Q96QP1	1244 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	PHF20	Q9BVI0	1012 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	MRPL4	Q9BYD3	311 aa	Known RBP	5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	ADAMTS10	Q9H324	1103 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	PLAA	Q9Y263	795 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	ATP10A	O60312	1499 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	PTPRM	P28827	1452 aa		5.51	□□□□□ -1.53
LRRC28-222	ENST00000561431	ARID4B	Q4LE39	1312 aa	Predicted RBP	5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	RIMS1	Q86UR5	1692 aa	Known RBP	5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	KIAA1107	Q9UPP5	1409 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	TMEM82	A0PJX8	343 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	AQP7	O14520	342 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	IRS4	O14654	1257 aa	Predicted RBP	5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	NPHS1	O60500	1241 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	EFCAB14	O75071	495 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	GDNF	P39905	211 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	GUCY1A3	Q02108	690 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	PABPC4	Q13310	644 aa	Known RBP eCLIP	5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	SLC35F1	Q5T1Q4	408 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	E4F1	Q66K89	784 aa	Predicted RBP	5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	KCNT2	Q6UVM3	1135 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	CEP128	Q6ZU80	1094 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	MAMDC2	Q7Z304	686 aa	Predicted RBP	5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	NIM1K	Q8IY84	436 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	AFAP1	Q8N556	730 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	NPLOC4	Q8TAT6	608 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	USP33	Q8TEY7	942 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	MAGEB10	Q96LZ2	347 aa	Predicted RBP	5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	ERVK13-1	Q9NX77	482 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	TNFRSF10D	Q9UBN6	386 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	SMG5	Q9UPR3	1016 aa	Known RBP	5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	TRAF6	Q9Y4K3	522 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	PCDHA2	Q9Y5H9	948 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	CCNB3	Q8WWL7	1395 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	PLEKHH2	Q8IVE3	1493 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	MBD5	Q9P267	1494 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	PLXNC1	O60486	1568 aa		5.5	□□□□□ -1.53
LRRC28-222	ENST00000561431	AGL	P35573	1532 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	ATP7A	Q04656	1500 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	TCAF2	A6NFQ2	919 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	ETV2	O00321	342 aa	Predicted RBP	5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	NAT1	P18440	290 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	GLDC	P23378	1020 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	RTP1	P59025	263 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	FNDC3B	Q53EP0	1204 aa	Known RBP	5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	RALGPS1	Q5JS13	557 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	ACBD5	Q5T8D3	534 aa	Predicted RBP	5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	CNNM4	Q6P4Q7	775 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	FILIP1	Q7Z7B0	1213 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	SPPL2C	Q8IUH8	684 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	IFNL3	Q8IZI9	196 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	OXR1	Q8N573	874 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	KREMEN2	Q8NCW0	462 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	MAP6	Q96JE9	813 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	ALG1	Q9BT22	464 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	SPC25	Q9HBM1	224 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	DCP1A	Q9NPI6	582 aa	Predicted RBP	5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	TMEM59L	Q9UK28	342 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	TAF6L	Q9Y6J9	622 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	CAMSAP2	Q08AD1	1489 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	FER1L4	A9Z1Z3	1794 aa		5.49	□□□□□ -1.53
LRRC28-222	ENST00000561431	ARHGEF5	Q12774	1597 aa		5.48	□□□□□ -1.53
LRRC28-222	ENST00000561431	NUAK1	O60285	661 aa		5.48	□□□□□ -1.53
LRRC28-222	ENST00000561431	OPA1	O60313	960 aa		5.48	□□□□□ -1.53
LRRC28-222	ENST00000561431	DNAJC6	O75061	913 aa		5.48	□□□□□ -1.53

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