RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 AIFM3Q96NN9 605 aa11.58□□□□□ -0.56
HERC1-212ENST00000561348 ALG1Q9BT22 464 aa11.58□□□□□ -0.56
HERC1-212ENST00000561348 ANO3Q9BYT9 981 aa11.58□□□□□ -0.56
HERC1-212ENST00000561348 COLQQ9Y215 455 aaPredicted RBP11.58□□□□□ -0.56
HERC1-212ENST00000561348 Q9Y3F1 56 aa11.58□□□□□ -0.56
HERC1-212ENST00000561348 KIAA1217Q5T5P2 1943 aa11.58□□□□□ -0.56
HERC1-212ENST00000561348 TLR3O15455 904 aaKnown RBP11.57□□□□□ -0.56
HERC1-212ENST00000561348 PFKFB2O60825 505 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 RGS20O76081 388 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 DEXIO95424 95 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 LARGE1O95461 756 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 CLTBP09497 229 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 ZNF286BP0CG31 522 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 RAG1P15918 1043 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 GNA11P29992 359 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 EVCP57679 992 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 SP2Q02086 613 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 ARHGAP1Q07960 439 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 LAMC2Q13753 1193 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 ME3Q16798 604 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 UTP14CQ5TAP6 766 aaKnown RBP11.57□□□□□ -0.56
HERC1-212ENST00000561348 PCNX4Q63HM2 1172 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 CCDC62Q6P9F0 684 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 KCNV1Q6PIU1 500 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 REXO1Q8N1G1 1221 aaKnown RBP11.57□□□□□ -0.56
HERC1-212ENST00000561348 MTG1Q9BT17 334 aaPredicted RBP11.57□□□□□ -0.56
HERC1-212ENST00000561348 PPP1R12CQ9BZL4 782 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 GLT8D2Q9H1C3 349 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 BCAS3Q9H6U6 928 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 KCNJ14Q9UNX9 436 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 NOD1Q9Y239 953 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 ELP1O95163 1332 aa11.57□□□□□ -0.56
HERC1-212ENST00000561348 DDX39AO00148 427 aaKnown RBP11.56□□□□□ -0.56
HERC1-212ENST00000561348 ARVCFO00192 962 aa11.56□□□□□ -0.56
HERC1-212ENST00000561348 ADAMTS3O15072 1205 aa11.56□□□□□ -0.56
HERC1-212ENST00000561348 FIBPO43427 364 aa11.56□□□□□ -0.56
HERC1-212ENST00000561348 CABYRO75952 493 aa11.56□□□□□ -0.56
HERC1-212ENST00000561348 FOSP01100 380 aaPredicted RBP11.56□□□□□ -0.56
HERC1-212ENST00000561348 MMP3P08254 477 aa11.56□□□□□ -0.56
HERC1-212ENST00000561348 UBA1P22314 1058 aaKnown RBP11.56□□□□□ -0.56
HERC1-212ENST00000561348 MAGEA10P43363 369 aaPredicted RBP11.56□□□□□ -0.56
HERC1-212ENST00000561348 PURAQ00577 322 aaKnown RBP11.56□□□□□ -0.56
HERC1-212ENST00000561348 MTMR1Q13613 665 aa11.56□□□□□ -0.56
HERC1-212ENST00000561348 DGKDQ16760 1214 aa11.56□□□□□ -0.56
HERC1-212ENST00000561348 CELF3Q5SZQ8 465 aaKnown RBP11.56□□□□□ -0.56
HERC1-212ENST00000561348 CCDC83Q8IWF9 413 aa11.56□□□□□ -0.56
HERC1-212ENST00000561348 BICD2Q8TD16 824 aa11.56□□□□□ -0.56
HERC1-212ENST00000561348 UBE2OQ9C0C9 1292 aaKnown RBP11.56□□□□□ -0.56
HERC1-212ENST00000561348 TRPV6Q9H1D0 765 aa11.56□□□□□ -0.56
HERC1-212ENST00000561348 ORC3Q9UBD5 711 aaPredicted RBP11.56□□□□□ -0.56
HERC1-212ENST00000561348 NID2Q14112 1375 aa11.55□□□□□ -0.56
HERC1-212ENST00000561348 A6NJR5 290 aa11.55□□□□□ -0.56
HERC1-212ENST00000561348 SPATA31C2B4DYI2 1134 aa11.55□□□□□ -0.56
HERC1-212ENST00000561348 STAM2O75886 525 aa11.55□□□□□ -0.56
HERC1-212ENST00000561348 XBP1P17861 261 aa11.55□□□□□ -0.56
HERC1-212ENST00000561348 NEDD9Q14511 834 aa11.55□□□□□ -0.56
HERC1-212ENST00000561348 NBPF20Q3BBV1 942 aa11.55□□□□□ -0.56
HERC1-212ENST00000561348 HSDL1Q3SXM5 330 aa11.55□□□□□ -0.56
HERC1-212ENST00000561348 MYSM1Q5VVJ2 828 aa11.55□□□□□ -0.56
HERC1-212ENST00000561348 CYP2W1Q8TAV3 490 aa11.55□□□□□ -0.56
HERC1-212ENST00000561348 BADQ92934 168 aa11.55□□□□□ -0.56
HERC1-212ENST00000561348 PDLIM7Q9NR12 457 aa11.55□□□□□ -0.56
HERC1-212ENST00000561348 GJB4Q9NTQ9 266 aa11.55□□□□□ -0.56
HERC1-212ENST00000561348 LIMCH1Q9UPQ0 1083 aa11.55□□□□□ -0.56
HERC1-212ENST00000561348 MROH7Q68CQ1 1323 aa11.55□□□□□ -0.56
HERC1-212ENST00000561348 DOCK5Q9H7D0 1870 aa11.55□□□□□ -0.56
HERC1-212ENST00000561348 TRIM43BA6NCK2 446 aa11.54□□□□□ -0.56
HERC1-212ENST00000561348 JAK2O60674 1132 aa11.54□□□□□ -0.56
HERC1-212ENST00000561348 KPNA6O60684 536 aa11.54□□□□□ -0.56
HERC1-212ENST00000561348 ATP9AO75110 1047 aa11.54□□□□□ -0.56
HERC1-212ENST00000561348 TGFB3P10600 412 aa11.54□□□□□ -0.56
HERC1-212ENST00000561348 ITGB5P18084 799 aa11.54□□□□□ -0.56
HERC1-212ENST00000561348 ARHGAP4P98171 946 aa11.54□□□□□ -0.56
HERC1-212ENST00000561348 FAAP100Q0VG06 881 aa11.54□□□□□ -0.56
HERC1-212ENST00000561348 AP3B2Q13367 1082 aa11.54□□□□□ -0.56
HERC1-212ENST00000561348 SNX17Q15036 470 aa11.54□□□□□ -0.56
HERC1-212ENST00000561348 XRRA1Q6P2D8 792 aa11.54□□□□□ -0.56
HERC1-212ENST00000561348 PLA2G4DQ86XP0 818 aa11.54□□□□□ -0.56
HERC1-212ENST00000561348 C7orf31Q8N865 590 aa11.54□□□□□ -0.56
HERC1-212ENST00000561348 GTF3C6Q969F1 213 aa11.54□□□□□ -0.56
HERC1-212ENST00000561348 TRIM43Q96BQ3 446 aaPredicted RBP11.54□□□□□ -0.56
HERC1-212ENST00000561348 INPP4AQ96PE3 977 aaPredicted RBP11.54□□□□□ -0.56
HERC1-212ENST00000561348 MXRA8Q9BRK3 442 aa11.54□□□□□ -0.56
HERC1-212ENST00000561348 ZMYND12Q9H0C1 365 aa11.54□□□□□ -0.56
HERC1-212ENST00000561348 ALDH8A1Q9H2A2 487 aaPredicted RBP11.54□□□□□ -0.56
HERC1-212ENST00000561348 TRMT13Q9NUP7 481 aaKnown RBP11.54□□□□□ -0.56
HERC1-212ENST00000561348 TCEAL9Q9UHQ7 104 aa11.54□□□□□ -0.56
HERC1-212ENST00000561348 FRMPD4Q14CM0 1322 aa11.54□□□□□ -0.56
HERC1-212ENST00000561348 ST18O60284 1047 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 B4GALT4O60513 344 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 ARP10275 920 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 CYP2C9P11712 490 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 CYP2C18P33260 490 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 PSEN2P49810 448 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 GUCY1B3Q02153 619 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 SEMA3FQ13275 785 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 TRIM29Q14134 588 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 MFSD10Q14728 455 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 KIAA0753Q2KHM9 967 aa11.53□□□□□ -0.56
HERC1-212ENST00000561348 PRR16Q569H4 304 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms