RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 ZNF326Q5BKZ1 582 aaKnown RBP5.96□□□□□ -1.46
USP8-216ENST00000561206 MRGPRGQ86SM5 289 aa5.96□□□□□ -1.46
USP8-216ENST00000561206 TMEM209Q96SK2 561 aa5.96□□□□□ -1.46
USP8-216ENST00000561206 TM9SF2Q99805 663 aa5.96□□□□□ -1.46
USP8-216ENST00000561206 SPON2Q9BUD6 331 aa5.96□□□□□ -1.46
USP8-216ENST00000561206 GZF1Q9H116 711 aaPredicted RBP5.96□□□□□ -1.46
USP8-216ENST00000561206 DMRT1Q9Y5R6 373 aa5.96□□□□□ -1.46
USP8-216ENST00000561206 FAM86C2PA6NEL3 165 aa5.95□□□□□ -1.46
USP8-216ENST00000561206 IMPDH2P12268 514 aa5.95□□□□□ -1.46
USP8-216ENST00000561206 GRB10Q13322 594 aa5.95□□□□□ -1.46
USP8-216ENST00000561206 FNDC7Q5VTL7 733 aa5.95□□□□□ -1.46
USP8-216ENST00000561206 Q6ZSN1 163 aa5.95□□□□□ -1.46
USP8-216ENST00000561206 MILR1Q7Z6M3 343 aa5.95□□□□□ -1.46
USP8-216ENST00000561206 Q8N1Y9 231 aa5.95□□□□□ -1.46
USP8-216ENST00000561206 LARP4BQ92615 738 aaKnown RBP5.95□□□□□ -1.46
USP8-216ENST00000561206 LMF1Q96S06 567 aa5.95□□□□□ -1.46
USP8-216ENST00000561206 MMP19Q99542 508 aa5.95□□□□□ -1.46
USP8-216ENST00000561206 ZNF214Q9UL59 606 aaPredicted RBP5.95□□□□□ -1.46
USP8-216ENST00000561206 KLHL18O94889 574 aa5.94□□□□□ -1.46
USP8-216ENST00000561206 TP53P04637 393 aaPredicted RBP5.94□□□□□ -1.46
USP8-216ENST00000561206 PPP2R5DQ14738 602 aa5.94□□□□□ -1.46
USP8-216ENST00000561206 LDLRAD1Q5T700 205 aa5.94□□□□□ -1.46
USP8-216ENST00000561206 MBLAC2Q68D91 279 aa5.94□□□□□ -1.46
USP8-216ENST00000561206 ZSWIM3Q96MP5 696 aa5.94□□□□□ -1.46
USP8-216ENST00000561206 BCL11AQ9H165 835 aa5.94□□□□□ -1.46
USP8-216ENST00000561206 HSPBP1Q9NZL4 362 aa5.94□□□□□ -1.46
USP8-216ENST00000561206 MARCH2Q9P0N8 246 aa5.94□□□□□ -1.46
USP8-216ENST00000561206 ZDHHC9Q9Y397 364 aa5.94□□□□□ -1.46
USP8-216ENST00000561206 THBDP07204 575 aa5.93□□□□□ -1.46
USP8-216ENST00000561206 ADH4P08319 380 aa5.93□□□□□ -1.46
USP8-216ENST00000561206 C1SP09871 688 aa5.93□□□□□ -1.46
USP8-216ENST00000561206 MROH9Q5TGP6 573 aa5.93□□□□□ -1.46
USP8-216ENST00000561206 RALYLQ86SE5 291 aaKnown RBP5.93□□□□□ -1.46
USP8-216ENST00000561206 RNF34Q969K3 372 aa5.93□□□□□ -1.46
USP8-216ENST00000561206 PRRX2Q99811 253 aa5.93□□□□□ -1.46
USP8-216ENST00000561206 DTLQ9NZJ0 730 aa5.93□□□□□ -1.46
USP8-216ENST00000561206 ZNF652Q9Y2D9 606 aa5.93□□□□□ -1.46
USP8-216ENST00000561206 COL10A1Q03692 680 aa5.92□□□□□ -1.46
USP8-216ENST00000561206 CCDC142Q17RM4 750 aa5.92□□□□□ -1.46
USP8-216ENST00000561206 IL17DQ8TAD2 202 aa5.92□□□□□ -1.46
USP8-216ENST00000561206 TOE1Q96GM8 510 aaKnown RBP5.92□□□□□ -1.46
USP8-216ENST00000561206 AJUBAQ96IF1 538 aa5.92□□□□□ -1.46
USP8-216ENST00000561206 KLHL25Q9H0H3 589 aa5.92□□□□□ -1.46
USP8-216ENST00000561206 CROTQ9UKG9 612 aa5.92□□□□□ -1.46
USP8-216ENST00000561206 WASF3Q9UPY6 502 aa5.92□□□□□ -1.46
USP8-216ENST00000561206 VAMP4O75379 141 aa5.91□□□□□ -1.46
USP8-216ENST00000561206 CHGBP05060 677 aa5.91□□□□□ -1.46
USP8-216ENST00000561206 AMPD2Q01433 879 aa5.91□□□□□ -1.46
USP8-216ENST00000561206 ZYXQ15942 572 aaKnown RBP5.91□□□□□ -1.46
USP8-216ENST00000561206 DPY19L1Q2PZI1 675 aa5.91□□□□□ -1.46
USP8-216ENST00000561206 TRMT10BQ6PF06 316 aaKnown RBP5.91□□□□□ -1.46
USP8-216ENST00000561206 TEPPQ6URK8 271 aa5.91□□□□□ -1.46
USP8-216ENST00000561206 UNC5AQ6ZN44 842 aa5.91□□□□□ -1.46
USP8-216ENST00000561206 Q6ZUG5 572 aa5.91□□□□□ -1.46
USP8-216ENST00000561206 C1orf210Q8IVY1 113 aa5.91□□□□□ -1.46
USP8-216ENST00000561206 FUKQ8N0W3 1084 aa5.91□□□□□ -1.46
USP8-216ENST00000561206 ARHGEF39Q8N4T4 335 aa5.91□□□□□ -1.46
USP8-216ENST00000561206 GIMAP8Q8ND71 665 aaPredicted RBP5.91□□□□□ -1.46
USP8-216ENST00000561206 NUDT10Q8NFP7 164 aa5.91□□□□□ -1.46
USP8-216ENST00000561206 NUDT11Q96G61 164 aa5.91□□□□□ -1.46
USP8-216ENST00000561206 HAUS7Q99871 368 aa5.91□□□□□ -1.46
USP8-216ENST00000561206 X6R8D5 127 aa5.91□□□□□ -1.46
USP8-216ENST00000561206 C22orf46C9J442 243 aa5.9□□□□□ -1.46
USP8-216ENST00000561206 RAD17O75943 681 aa5.9□□□□□ -1.46
USP8-216ENST00000561206 ZNF76P36508 570 aa5.9□□□□□ -1.46
USP8-216ENST00000561206 TUBA3CQ13748 450 aa5.9□□□□□ -1.46
USP8-216ENST00000561206 TUBA3EQ6PEY2 450 aa5.9□□□□□ -1.46
USP8-216ENST00000561206 MAMDC4Q6UXC1 1216 aa5.9□□□□□ -1.46
USP8-216ENST00000561206 TEX2Q8IWB9 1127 aa5.9□□□□□ -1.46
USP8-216ENST00000561206 TMEM87AQ8NBN3 555 aa5.9□□□□□ -1.46
USP8-216ENST00000561206 RBBP8NLQ8NC74 664 aaPredicted RBP5.9□□□□□ -1.46
USP8-216ENST00000561206 COPS5Q92905 334 aa5.9□□□□□ -1.46
USP8-216ENST00000561206 RCC1LQ96I51 464 aaKnown RBP5.9□□□□□ -1.46
USP8-216ENST00000561206 FERD3LQ96RJ6 166 aa5.9□□□□□ -1.46
USP8-216ENST00000561206 YIPF4Q9BSR8 244 aa5.9□□□□□ -1.46
USP8-216ENST00000561206 ZNF703Q9H7S9 590 aaPredicted RBP5.9□□□□□ -1.46
USP8-216ENST00000561206 CGGBP1Q9UFW8 167 aaPredicted RBP5.9□□□□□ -1.46
USP8-216ENST00000561206 SLC30A1Q9Y6M5 507 aa5.9□□□□□ -1.46
USP8-216ENST00000561206 MAKP20794 623 aa5.89□□□□□ -1.47
USP8-216ENST00000561206 ACO1P21399 889 aaKnown RBP5.89□□□□□ -1.47
USP8-216ENST00000561206 GUCY2CP25092 1073 aa5.89□□□□□ -1.47
USP8-216ENST00000561206 CSF2RBP32927 897 aa5.89□□□□□ -1.47
USP8-216ENST00000561206 ZNF627Q7L945 461 aa5.89□□□□□ -1.47
USP8-216ENST00000561206 TAX1BP1Q86VP1 789 aa5.89□□□□□ -1.47
USP8-216ENST00000561206 ULK2Q8IYT8 1036 aa5.89□□□□□ -1.47
USP8-216ENST00000561206 ADCY4Q8NFM4 1077 aa5.89□□□□□ -1.47
USP8-216ENST00000561206 PLEKHG4BQ96PX9 1271 aa5.89□□□□□ -1.47
USP8-216ENST00000561206 LRRC37BQ96QE4 947 aa5.89□□□□□ -1.47
USP8-216ENST00000561206 MMRN2Q9H8L6 949 aa5.89□□□□□ -1.47
USP8-216ENST00000561206 TMEFF2Q9UIK5 374 aaPredicted RBP5.89□□□□□ -1.47
USP8-216ENST00000561206 PPT2Q9UMR5 302 aa5.89□□□□□ -1.47
USP8-216ENST00000561206 LRG1P02750 347 aa5.88□□□□□ -1.47
USP8-216ENST00000561206 ZNF16P17020 682 aaPredicted RBP5.88□□□□□ -1.47
USP8-216ENST00000561206 KRT4P19013 534 aa5.88□□□□□ -1.47
USP8-216ENST00000561206 ACRV1P26436 265 aa5.88□□□□□ -1.47
USP8-216ENST00000561206 FANCCQ00597 558 aa5.88□□□□□ -1.47
USP8-216ENST00000561206 ZNF394Q53GI3 561 aa5.88□□□□□ -1.47
USP8-216ENST00000561206 Q6ZPA2 131 aa5.88□□□□□ -1.47
USP8-216ENST00000561206 ZNF483Q8TF39 744 aaPredicted RBP5.88□□□□□ -1.47
USP8-216ENST00000561206 NEIL1Q96FI4 390 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms