RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	C8orf58	Q8NAV2	365 aa		9.07	□□□□□ -0.96
MARK3-223	ENST00000561071	PLBD2	Q8NHP8	589 aa		9.07	□□□□□ -0.96
MARK3-223	ENST00000561071	SEC16B	Q96JE7	1060 aa		9.07	□□□□□ -0.96
MARK3-223	ENST00000561071	DBNDD2	Q9BQY9	259 aa		9.07	□□□□□ -0.96
MARK3-223	ENST00000561071	PHAX	Q9H814	394 aa	Known RBP	9.07	□□□□□ -0.96
MARK3-223	ENST00000561071	DBF4	Q9UBU7	674 aa	Predicted RBP	9.07	□□□□□ -0.96
MARK3-223	ENST00000561071	SH3TC1	Q8TE82	1336 aa		9.06	□□□□□ -0.96
MARK3-223	ENST00000561071	PASK	Q96RG2	1323 aa		9.06	□□□□□ -0.96
MARK3-223	ENST00000561071	WDR64	B1ANS9	1081 aa		9.06	□□□□□ -0.96
MARK3-223	ENST00000561071	BBOX1	O75936	387 aa		9.06	□□□□□ -0.96
MARK3-223	ENST00000561071	SLITRK5	O94991	958 aa		9.06	□□□□□ -0.96
MARK3-223	ENST00000561071	PRSS36	Q5K4E3	855 aa		9.06	□□□□□ -0.96
MARK3-223	ENST00000561071	DDX46	Q7L014	1031 aa	Known RBP	9.06	□□□□□ -0.96
MARK3-223	ENST00000561071	VPS37D	Q86XT2	251 aa		9.06	□□□□□ -0.96
MARK3-223	ENST00000561071	SP8	Q8IXZ3	490 aa		9.06	□□□□□ -0.96
MARK3-223	ENST00000561071	NIM1K	Q8IY84	436 aa		9.06	□□□□□ -0.96
MARK3-223	ENST00000561071	SLC43A3	Q8NBI5	491 aa		9.06	□□□□□ -0.96
MARK3-223	ENST00000561071	RIN3	Q8TB24	985 aa		9.06	□□□□□ -0.96
MARK3-223	ENST00000561071	SHKBP1	Q8TBC3	707 aa		9.06	□□□□□ -0.96
MARK3-223	ENST00000561071	MIPEP	Q99797	713 aa		9.06	□□□□□ -0.96
MARK3-223	ENST00000561071	ISCA1	Q9BUE6	129 aa		9.06	□□□□□ -0.96
MARK3-223	ENST00000561071	DUSP23	Q9BVJ7	150 aa		9.06	□□□□□ -0.96
MARK3-223	ENST00000561071	PRDM10	Q9NQV6	1147 aa		9.06	□□□□□ -0.96
MARK3-223	ENST00000561071	HYPK	Q9NX55	129 aa		9.06	□□□□□ -0.96
MARK3-223	ENST00000561071	TAF1	P21675	1872 aa		9.05	□□□□□ -0.96
MARK3-223	ENST00000561071	HOXB7	P09629	217 aa		9.05	□□□□□ -0.96
MARK3-223	ENST00000561071	HSPA1A	P0DMV8	641 aa	Known RBP	9.05	□□□□□ -0.96
MARK3-223	ENST00000561071	HSPA1B	P0DMV9	641 aa	Known RBP	9.05	□□□□□ -0.96
MARK3-223	ENST00000561071	ITGB7	P26010	798 aa		9.05	□□□□□ -0.96
MARK3-223	ENST00000561071	GNAI1	P63096	354 aa		9.05	□□□□□ -0.96
MARK3-223	ENST00000561071	ARID5A	Q03989	594 aa		9.05	□□□□□ -0.96
MARK3-223	ENST00000561071	ARSH	Q5FYA8	562 aa		9.05	□□□□□ -0.96
MARK3-223	ENST00000561071	DPP8	Q6V1X1	898 aa	Predicted RBP	9.05	□□□□□ -0.96
MARK3-223	ENST00000561071	ZNF765	Q7L2R6	523 aa		9.05	□□□□□ -0.96
MARK3-223	ENST00000561071	SLFN12	Q8IYM2	578 aa		9.05	□□□□□ -0.96
MARK3-223	ENST00000561071	CNTROB	Q8N137	903 aa		9.05	□□□□□ -0.96
MARK3-223	ENST00000561071	TSPYL6	Q8N831	410 aa		9.05	□□□□□ -0.96
MARK3-223	ENST00000561071	CELF1	Q92879	486 aa	Known RBP	9.05	□□□□□ -0.96
MARK3-223	ENST00000561071	SRRT	Q9BXP5	876 aa	Known RBP	9.05	□□□□□ -0.96
MARK3-223	ENST00000561071	TMX4	Q9H1E5	349 aa	Predicted RBP	9.05	□□□□□ -0.96
MARK3-223	ENST00000561071	IFT57	Q9NWB7	429 aa		9.05	□□□□□ -0.96
MARK3-223	ENST00000561071	GMIP	Q9P107	970 aa		9.05	□□□□□ -0.96
MARK3-223	ENST00000561071	SCN4A	P35499	1836 aa		9.04	□□□□□ -0.96
MARK3-223	ENST00000561071	RAD17	O75943	681 aa		9.04	□□□□□ -0.96
MARK3-223	ENST00000561071	YARS	P54577	528 aa	Known RBP	9.04	□□□□□ -0.96
MARK3-223	ENST00000561071	CXCL9	Q07325	125 aa		9.04	□□□□□ -0.96
MARK3-223	ENST00000561071	GRAP	Q13588	217 aa		9.04	□□□□□ -0.96
MARK3-223	ENST00000561071	OGFOD3	Q6PK18	319 aa		9.04	□□□□□ -0.96
MARK3-223	ENST00000561071	PNMA8A	Q86V59	439 aa	Predicted RBP	9.04	□□□□□ -0.96
MARK3-223	ENST00000561071	MFSD2A	Q8NA29	543 aa		9.04	□□□□□ -0.96
MARK3-223	ENST00000561071	GRAPL	Q8TC17	118 aa	Predicted RBP	9.04	□□□□□ -0.96
MARK3-223	ENST00000561071	TMEM40	Q8WWA1	233 aa		9.04	□□□□□ -0.96
MARK3-223	ENST00000561071	TSR2	Q969E8	191 aa	Known RBP	9.04	□□□□□ -0.96
MARK3-223	ENST00000561071	ATG4C	Q96DT6	458 aa		9.04	□□□□□ -0.96
MARK3-223	ENST00000561071	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	9.04	□□□□□ -0.96	8e-7	■□□□□ 10.2
MARK3-223	ENST00000561071	RTFDC1	Q9BY42	306 aa	Predicted RBP	9.04	□□□□□ -0.96
MARK3-223	ENST00000561071	LAMB2	P55268	1798 aa		9.04	□□□□□ -0.96
MARK3-223	ENST00000561071	ANKRD36C	Q5JPF3	1778 aa		9.04	□□□□□ -0.96
MARK3-223	ENST00000561071	COL4A1	P02462	1669 aa		9.04	□□□□□ -0.96
MARK3-223	ENST00000561071	LTBP1	Q14766	1721 aa		9.03	□□□□□ -0.96
MARK3-223	ENST00000561071	SHTN1	A0MZ66	631 aa		9.03	□□□□□ -0.96
MARK3-223	ENST00000561071	MEIS3P2	A8K0S8	358 aa		9.03	□□□□□ -0.96
MARK3-223	ENST00000561071	TRAF5	O00463	557 aa		9.03	□□□□□ -0.96
MARK3-223	ENST00000561071	IRS4	O14654	1257 aa	Predicted RBP	9.03	□□□□□ -0.96
MARK3-223	ENST00000561071	GSC2	O15499	205 aa		9.03	□□□□□ -0.96
MARK3-223	ENST00000561071	FGR	P09769	529 aa		9.03	□□□□□ -0.96
MARK3-223	ENST00000561071	GMPS	P49915	693 aa	Predicted RBP	9.03	□□□□□ -0.96
MARK3-223	ENST00000561071	GPSM2	P81274	684 aa		9.03	□□□□□ -0.96
MARK3-223	ENST00000561071	RUFY4	Q6ZNE9	571 aa		9.03	□□□□□ -0.96
MARK3-223	ENST00000561071	MCF2L2	Q86YR7	1114 aa		9.03	□□□□□ -0.96
MARK3-223	ENST00000561071	CPLX3	Q8WVH0	158 aa		9.03	□□□□□ -0.96
MARK3-223	ENST00000561071	GPR101	Q96P66	508 aa	Predicted RBP	9.03	□□□□□ -0.96
MARK3-223	ENST00000561071	MYD88	Q99836	296 aa		9.03	□□□□□ -0.96
MARK3-223	ENST00000561071	YDJC	A8MPS7	323 aa		9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	IMPDH2	P12268	514 aa		9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	POLR2B	P30876	1174 aa	Known RBP	9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	CALD1	Q05682	793 aa	Known RBP	9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	KIAA2012	Q0VF49	1180 aa		9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	SF3B3	Q15393	1217 aa	Known RBP	9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	LETMD1	Q6P1Q0	360 aa		9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	NLRC3	Q7RTR2	1065 aa		9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	LSR	Q86X29	649 aa	Predicted RBP	9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	ZDHHC13	Q8IUH4	622 aa		9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	PHACTR4	Q8IZ21	702 aa		9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	SUPT20H	Q8NEM7	779 aa		9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	GIMAP7	Q8NHV1	300 aa		9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	BAHD1	Q8TBE0	780 aa	Predicted RBP	9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	CYB5D2	Q8WUJ1	264 aa		9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	SHD	Q96IW2	340 aa		9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	GML	Q99445	158 aa		9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	KIF2C	Q99661	725 aa		9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	OSBPL1A	Q9BXW6	950 aa		9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	CNNM2	Q9H8M5	875 aa		9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	GPRC5D	Q9NZD1	345 aa		9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	MRVI1	Q9Y6F6	885 aa		9.02	□□□□□ -0.97
MARK3-223	ENST00000561071	ADAMTSL1	Q8N6G6	1762 aa		9.01	□□□□□ -0.97
MARK3-223	ENST00000561071	CNTNAP1	P78357	1384 aa		9.01	□□□□□ -0.97
MARK3-223	ENST00000561071		K7ELQ4	463 aa	Predicted RBP	9.01	□□□□□ -0.97
MARK3-223	ENST00000561071	EOMES	O95936	686 aa		9.01	□□□□□ -0.97
MARK3-223	ENST00000561071	NME1	P15531	152 aa	Known RBP	9.01	□□□□□ -0.97

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