RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 LRRN4Q8WUT4 740 aa8.52□□□□□ -1.05
GABPB1-211ENST00000561010 COL25A1Q9BXS0 654 aaPredicted RBP8.52□□□□□ -1.05
GABPB1-211ENST00000561010 TRPV6Q9H1D0 765 aa8.52□□□□□ -1.05
GABPB1-211ENST00000561010 RANBP17Q9H2T7 1088 aaKnown RBP8.52□□□□□ -1.05
GABPB1-211ENST00000561010 SYNPO2Q9UMS6 1093 aa8.52□□□□□ -1.05
GABPB1-211ENST00000561010 GNEQ9Y223 722 aaKnown RBP8.52□□□□□ -1.05
GABPB1-211ENST00000561010 WDR81Q562E7 1941 aa8.52□□□□□ -1.05
GABPB1-211ENST00000561010 TRANK1O15050 2925 aa8.52□□□□□ -1.05
GABPB1-211ENST00000561010 CCDC171Q6TFL3 1326 aa8.52□□□□□ -1.05
GABPB1-211ENST00000561010 VCANP13611 3396 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 PTPDC1A2A3K4 754 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 PLA2G6O60733 806 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 ICAM1P05362 532 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 FGRP09769 529 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 PDHBP11177 359 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 TOP1P11387 765 aaKnown RBP8.51□□□□□ -1.05
GABPB1-211ENST00000561010 CALML3P27482 149 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 NOVP48745 357 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 ALDH5A1P51649 535 aaPredicted RBP8.51□□□□□ -1.05
GABPB1-211ENST00000561010 CCL23P55773 120 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 GRIN2CQ14957 1233 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 FSCN1Q16658 493 aaKnown RBP8.51□□□□□ -1.05
GABPB1-211ENST00000561010 TKFCQ3LXA3 575 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 USH1GQ495M9 461 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 TMEM240Q5SV17 173 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 KIAA1211Q6ZU35 1233 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 ZNF365Q70YC5 407 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 PLEKHM2Q8IWE5 1019 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 PCSK9Q8NBP7 692 aaKnown RBP8.51□□□□□ -1.05
GABPB1-211ENST00000561010 DCAF4Q8WV16 495 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 CLEC4DQ8WXI8 215 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 COPS5Q92905 334 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 TOX2Q96NM4 488 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 SPC25Q9HBM1 224 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 PRDM6Q9NQX0 595 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 MYO7AQ13402 2215 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 ELP1O95163 1332 aa8.51□□□□□ -1.05
GABPB1-211ENST00000561010 SIP14410 1827 aa8.5□□□□□ -1.05
GABPB1-211ENST00000561010 ASB14A6NK59 587 aa8.5□□□□□ -1.05
GABPB1-211ENST00000561010 B4GALT4O60513 344 aa8.5□□□□□ -1.05
GABPB1-211ENST00000561010 CD4P01730 458 aa8.5□□□□□ -1.05
GABPB1-211ENST00000561010 FOSL2P15408 326 aa8.5□□□□□ -1.05
GABPB1-211ENST00000561010 SDSP20132 328 aa8.5□□□□□ -1.05
GABPB1-211ENST00000561010 ZNF543Q08ER8 600 aa8.5□□□□□ -1.05
GABPB1-211ENST00000561010 ITGA7Q13683 1181 aa8.5□□□□□ -1.05
GABPB1-211ENST00000561010 AKNAD1Q5T1N1 836 aa8.5□□□□□ -1.05
GABPB1-211ENST00000561010 LCE2AQ5TA79 106 aaPredicted RBP8.5□□□□□ -1.05
GABPB1-211ENST00000561010 MFSD5Q6N075 450 aa8.5□□□□□ -1.05
GABPB1-211ENST00000561010 CWC27Q6UX04 472 aaKnown RBP8.5□□□□□ -1.05
GABPB1-211ENST00000561010 BTNL9Q6UXG8 535 aa8.5□□□□□ -1.05
GABPB1-211ENST00000561010 TBC1D5Q92609 795 aa8.5□□□□□ -1.05
GABPB1-211ENST00000561010 SCLYQ96I15 445 aa8.5□□□□□ -1.05
GABPB1-211ENST00000561010 UBA5Q9GZZ9 404 aa8.5□□□□□ -1.05
GABPB1-211ENST00000561010 AP5M1Q9H0R1 490 aa8.5□□□□□ -1.05
GABPB1-211ENST00000561010 WNT8AQ9H1J5 351 aa8.5□□□□□ -1.05
GABPB1-211ENST00000561010 IL25Q9H293 177 aa8.5□□□□□ -1.05
GABPB1-211ENST00000561010 CXXC1Q9P0U4 656 aaPredicted RBP8.5□□□□□ -1.05
GABPB1-211ENST00000561010 FCF1Q9Y324 198 aaKnown RBP8.5□□□□□ -1.05
GABPB1-211ENST00000561010 EVPLQ92817 2033 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 B4E1Z4 1266 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 MYL3P08590 195 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 CYP2C9P11712 490 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 CTHP32929 405 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 RABGGTBP53611 331 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 CHMP4BP1P59074 171 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 NKX3-2P78367 333 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 PPIGQ13427 754 aaKnown RBP eCLIP8.49□□□□□ -1.05
GABPB1-211ENST00000561010 MFSD6Q6ZSS7 791 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 OTOP2Q7RTS6 562 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 CHD1LQ86WJ1 897 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 SMC5Q8IY18 1101 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 PPM1EQ8WY54 764 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 TIFAQ96CG3 184 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 VWCEQ96DN2 955 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 PBX4Q9BYU1 374 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 WDR11Q9BZH6 1224 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 HIPK3Q9H422 1215 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 PRM3Q9NNZ6 103 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 TRMT13Q9NUP7 481 aaKnown RBP8.49□□□□□ -1.05
GABPB1-211ENST00000561010 MROH7Q68CQ1 1323 aa8.49□□□□□ -1.05
GABPB1-211ENST00000561010 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.48□□□□□ -1.05
GABPB1-211ENST00000561010 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.48□□□□□ -1.05
GABPB1-211ENST00000561010 TLR3O15455 904 aaKnown RBP8.48□□□□□ -1.05
GABPB1-211ENST00000561010 ARIH2O95376 493 aa8.48□□□□□ -1.05
GABPB1-211ENST00000561010 MYOGP15173 224 aa8.48□□□□□ -1.05
GABPB1-211ENST00000561010 RPS6P62753 249 aaKnown RBP8.48□□□□□ -1.05
GABPB1-211ENST00000561010 RASIP1Q5U651 963 aa8.48□□□□□ -1.05
GABPB1-211ENST00000561010 IQSEC1Q6DN90 963 aa8.48□□□□□ -1.05
GABPB1-211ENST00000561010 RNF207Q6ZRF8 634 aa8.48□□□□□ -1.05
GABPB1-211ENST00000561010 TMEM199Q8N511 208 aa8.48□□□□□ -1.05
GABPB1-211ENST00000561010 SLC43A3Q8NBI5 491 aa8.48□□□□□ -1.05
GABPB1-211ENST00000561010 OR6J1Q8NGC5 347 aa8.48□□□□□ -1.05
GABPB1-211ENST00000561010 MORC4Q8TE76 937 aa8.48□□□□□ -1.05
GABPB1-211ENST00000561010 NOC4LQ9BVI4 516 aaKnown RBP8.48□□□□□ -1.05
GABPB1-211ENST00000561010 NKX2-4Q9H2Z4 354 aa8.48□□□□□ -1.05
GABPB1-211ENST00000561010 PRDM12Q9H4Q4 367 aa8.48□□□□□ -1.05
GABPB1-211ENST00000561010 ZNF576Q9H609 170 aa8.48□□□□□ -1.05
GABPB1-211ENST00000561010 VTA1Q9NP79 307 aa8.48□□□□□ -1.05
GABPB1-211ENST00000561010 IL23AQ9NPF7 189 aa8.48□□□□□ -1.05
GABPB1-211ENST00000561010 TCP11L1Q9NUJ3 509 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms