RNA–Protein interactions for RNA: ENST00000561004.1

AP4E1-204, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 3

Gene AP4E1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-204ENST00000561004 PMFBP1Q8TBY8 1022 aa6.18□□□□□ -1.42
AP4E1-204ENST00000561004 DVL3Q92997 716 aaPredicted RBP6.18□□□□□ -1.42
AP4E1-204ENST00000561004 ACSF2Q96CM8 615 aaPredicted RBP6.18□□□□□ -1.42
AP4E1-204ENST00000561004 KIAA1522Q9P206 1035 aaPredicted RBP6.18□□□□□ -1.42
AP4E1-204ENST00000561004 ZNF281Q9Y2X9 895 aa6.18□□□□□ -1.42
AP4E1-204ENST00000561004 TTC21BQ7Z4L5 1316 aa6.18□□□□□ -1.42
AP4E1-204ENST00000561004 COL18A1P39060 1754 aa6.18□□□□□ -1.42
AP4E1-204ENST00000561004 PNPLA6Q8IY17 1366 aa6.18□□□□□ -1.42
AP4E1-204ENST00000561004 SMG6Q86US8 1419 aaKnown RBP6.17□□□□□ -1.42
AP4E1-204ENST00000561004 UNCXA6NJT0 531 aa6.17□□□□□ -1.42
AP4E1-204ENST00000561004 CNR2P34972 360 aa6.17□□□□□ -1.42
AP4E1-204ENST00000561004 YARSP54577 528 aaKnown RBP6.17□□□□□ -1.42
AP4E1-204ENST00000561004 TARBP2Q15633 366 aaKnown RBP6.17□□□□□ -1.42
AP4E1-204ENST00000561004 CLEC16AQ2KHT3 1053 aa6.17□□□□□ -1.42
AP4E1-204ENST00000561004 LIPIQ6XZB0 460 aa6.17□□□□□ -1.42
AP4E1-204ENST00000561004 USP48Q86UV5 1035 aa6.17□□□□□ -1.42
AP4E1-204ENST00000561004 CCDC146Q8IYE0 955 aa6.17□□□□□ -1.42
AP4E1-204ENST00000561004 SLFN12Q8IYM2 578 aa6.17□□□□□ -1.42
AP4E1-204ENST00000561004 REXO1Q8N1G1 1221 aaKnown RBP6.17□□□□□ -1.42
AP4E1-204ENST00000561004 DNAJB8Q8NHS0 232 aa6.17□□□□□ -1.42
AP4E1-204ENST00000561004 C8orf49Q96NF6 230 aa6.17□□□□□ -1.42
AP4E1-204ENST00000561004 RBM15Q96T37 977 aaKnown RBP eCLIP6.17□□□□□ -1.42
AP4E1-204ENST00000561004 G6PC3Q9BUM1 346 aa6.17□□□□□ -1.42
AP4E1-204ENST00000561004 POLKQ9UBT6 870 aa6.17□□□□□ -1.42
AP4E1-204ENST00000561004 POLR3KQ9Y2Y1 108 aaPredicted RBP6.17□□□□□ -1.42
AP4E1-204ENST00000561004 CORINQ9Y5Q5 1042 aa6.17□□□□□ -1.42
AP4E1-204ENST00000561004 ABCA3Q99758 1704 aa6.16□□□□□ -1.42
AP4E1-204ENST00000561004 LRRC7Q96NW7 1537 aa6.16□□□□□ -1.42
AP4E1-204ENST00000561004 HTR3BO95264 441 aa6.16□□□□□ -1.42
AP4E1-204ENST00000561004 RPL10P27635 214 aaKnown RBP6.16□□□□□ -1.42
AP4E1-204ENST00000561004 GJA9P57773 515 aa6.16□□□□□ -1.42
AP4E1-204ENST00000561004 CRIP3Q6Q6R5 217 aa6.16□□□□□ -1.42
AP4E1-204ENST00000561004 KIAA0825Q8IV33 1275 aa6.16□□□□□ -1.42
AP4E1-204ENST00000561004 SLITRK4Q8IW52 837 aa6.16□□□□□ -1.42
AP4E1-204ENST00000561004 FBXO27Q8NI29 283 aa6.16□□□□□ -1.42
AP4E1-204ENST00000561004 SPON2Q9BUD6 331 aa6.16□□□□□ -1.42
AP4E1-204ENST00000561004 ASCC2Q9H1I8 757 aaPredicted RBP6.16□□□□□ -1.42
AP4E1-204ENST00000561004 EHMT1Q9H9B1 1298 aa6.16□□□□□ -1.42
AP4E1-204ENST00000561004 KLHL14Q9P2G3 628 aa6.16□□□□□ -1.42
AP4E1-204ENST00000561004 REV1Q9UBZ9 1251 aa6.16□□□□□ -1.42
AP4E1-204ENST00000561004 DDX41Q9UJV9 622 aaKnown RBP6.16□□□□□ -1.42
AP4E1-204ENST00000561004 ZNF521Q96K83 1311 aa6.16□□□□□ -1.42
AP4E1-204ENST00000561004 APAF1O14727 1248 aa6.15□□□□□ -1.42
AP4E1-204ENST00000561004 USP2O75604 605 aaPredicted RBP6.15□□□□□ -1.42
AP4E1-204ENST00000561004 RAB3GAP1Q15042 981 aa6.15□□□□□ -1.42
AP4E1-204ENST00000561004 WDR43Q15061 677 aaKnown RBP eCLIP6.15□□□□□ -1.42
AP4E1-204ENST00000561004 GALNT18Q6P9A2 607 aa6.15□□□□□ -1.42
AP4E1-204ENST00000561004 METTL16Q86W50 562 aaKnown RBP6.15□□□□□ -1.42
AP4E1-204ENST00000561004 ENOX1Q8TC92 643 aaKnown RBP6.15□□□□□ -1.42
AP4E1-204ENST00000561004 CYB5D2Q8WUJ1 264 aa6.15□□□□□ -1.42
AP4E1-204ENST00000561004 RNF141Q8WVD5 230 aa6.15□□□□□ -1.42
AP4E1-204ENST00000561004 MAP6Q96JE9 813 aa6.15□□□□□ -1.42
AP4E1-204ENST00000561004 SUSD2Q9UGT4 822 aa6.15□□□□□ -1.42
AP4E1-204ENST00000561004 AATKQ6ZMQ8 1374 aa6.15□□□□□ -1.43
AP4E1-204ENST00000561004 MST1RQ04912 1400 aa6.15□□□□□ -1.43
AP4E1-204ENST00000561004 CDK12Q9NYV4 1490 aaPredicted RBP6.15□□□□□ -1.43
AP4E1-204ENST00000561004 NFAT5O94916 1531 aa6.15□□□□□ -1.43
AP4E1-204ENST00000561004 NHSL1Q5SYE7 1610 aa6.14□□□□□ -1.43
AP4E1-204ENST00000561004 TLR3O15455 904 aaKnown RBP6.14□□□□□ -1.43
AP4E1-204ENST00000561004 CRKP46108 304 aa6.14□□□□□ -1.43
AP4E1-204ENST00000561004 ZNF165P49910 485 aa6.14□□□□□ -1.43
AP4E1-204ENST00000561004 APOBRQ0VD83 1088 aa6.14□□□□□ -1.43
AP4E1-204ENST00000561004 RRS1Q15050 365 aaKnown RBP6.14□□□□□ -1.43
AP4E1-204ENST00000561004 TRMT2AQ8IZ69 625 aaKnown RBP6.14□□□□□ -1.43
AP4E1-204ENST00000561004 ZNF654Q8IZM8 581 aa6.14□□□□□ -1.43
AP4E1-204ENST00000561004 FAM13CQ8NE31 585 aa6.14□□□□□ -1.43
AP4E1-204ENST00000561004 KISS1RQ969F8 398 aaPredicted RBP6.14□□□□□ -1.43
AP4E1-204ENST00000561004 NKD1Q969G9 470 aa6.14□□□□□ -1.43
AP4E1-204ENST00000561004 EAF1Q96JC9 268 aaPredicted RBP6.14□□□□□ -1.43
AP4E1-204ENST00000561004 PLEKHF1Q96S99 279 aa6.14□□□□□ -1.43
AP4E1-204ENST00000561004 ORAI2Q96SN7 254 aa6.14□□□□□ -1.43
AP4E1-204ENST00000561004 SPATA25Q9BR10 227 aa6.14□□□□□ -1.43
AP4E1-204ENST00000561004 KRTAP3-1Q9BYR8 98 aa6.14□□□□□ -1.43
AP4E1-204ENST00000561004 BRMS1Q9HCU9 246 aa6.14□□□□□ -1.43
AP4E1-204ENST00000561004 UBP1Q9NZI7 540 aa6.14□□□□□ -1.43
AP4E1-204ENST00000561004 NUDCQ9Y266 331 aa6.14□□□□□ -1.43
AP4E1-204ENST00000561004 C1orf167Q5SNV9 1468 aa6.14□□□□□ -1.43
AP4E1-204ENST00000561004 MED1Q15648 1581 aaPredicted RBP6.14□□□□□ -1.43
AP4E1-204ENST00000561004 SSU72P8A0A1W2PR75 194 aa6.13□□□□□ -1.43
AP4E1-204ENST00000561004 UPK3BL1B0FP48 263 aa6.13□□□□□ -1.43
AP4E1-204ENST00000561004 UPK3BL2E5RIL1 263 aa6.13□□□□□ -1.43
AP4E1-204ENST00000561004 SDHBP21912 280 aa6.13□□□□□ -1.43
AP4E1-204ENST00000561004 IL13P35225 146 aa6.13□□□□□ -1.43
AP4E1-204ENST00000561004 RACK1P63244 317 aaKnown RBP6.13□□□□□ -1.43
AP4E1-204ENST00000561004 PURAQ00577 322 aaKnown RBP6.13□□□□□ -1.43
AP4E1-204ENST00000561004 CBX2Q14781 532 aaPredicted RBP6.13□□□□□ -1.43
AP4E1-204ENST00000561004 LRRFIP1Q32MZ4 808 aaKnown RBP6.13□□□□□ -1.43
AP4E1-204ENST00000561004 SEZ6Q53EL9 994 aa6.13□□□□□ -1.43
AP4E1-204ENST00000561004 ZNF394Q53GI3 561 aa6.13□□□□□ -1.43
AP4E1-204ENST00000561004 NGDNQ8NEJ9 315 aaKnown RBP6.13□□□□□ -1.43
AP4E1-204ENST00000561004 SH3RF3Q8TEJ3 882 aaPredicted RBP6.13□□□□□ -1.43
AP4E1-204ENST00000561004 DDX1Q92499 740 aaKnown RBP6.13□□□□□ -1.43
AP4E1-204ENST00000561004 COG3Q96JB2 828 aa6.13□□□□□ -1.43
AP4E1-204ENST00000561004 SPATA32Q96LK8 384 aa6.13□□□□□ -1.43
AP4E1-204ENST00000561004 LNPKQ9C0E8 428 aa6.13□□□□□ -1.43
AP4E1-204ENST00000561004 PCED1AQ9H1Q7 454 aa6.13□□□□□ -1.43
AP4E1-204ENST00000561004 RNF123Q5XPI4 1314 aa6.13□□□□□ -1.43
AP4E1-204ENST00000561004 TTC21AQ8NDW8 1320 aa6.13□□□□□ -1.43
AP4E1-204ENST00000561004 TMEM94Q12767 1356 aa6.13□□□□□ -1.43
AP4E1-204ENST00000561004 SLIT3O75094 1523 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms