RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 GPR62Q9BZJ7 368 aa5.23□□□□□ -1.57
HERC1-211ENST00000560983 RAPGEFL1Q9UHV5 662 aa5.23□□□□□ -1.57
HERC1-211ENST00000560983 CEP131Q9UPN4 1083 aa5.23□□□□□ -1.57
HERC1-211ENST00000560983 STXBP5LQ9Y2K9 1186 aa5.23□□□□□ -1.57
HERC1-211ENST00000560983 KIF24Q5T7B8 1368 aa5.23□□□□□ -1.57
HERC1-211ENST00000560983 EYSQ5T1H1 3165 aa5.23□□□□□ -1.57
HERC1-211ENST00000560983 SLX4Q8IY92 1834 aa5.23□□□□□ -1.57
HERC1-211ENST00000560983 WASHC2AQ641Q2 1341 aa5.23□□□□□ -1.57
HERC1-211ENST00000560983 ST20-MTHFSA0A0A6YYL1 179 aa5.22□□□□□ -1.57
HERC1-211ENST00000560983 FAM221AA4D161 298 aa5.22□□□□□ -1.57
HERC1-211ENST00000560983 FKTNO75072 461 aa5.22□□□□□ -1.57
HERC1-211ENST00000560983 CILPO75339 1184 aa5.22□□□□□ -1.57
HERC1-211ENST00000560983 HPXP02790 462 aa5.22□□□□□ -1.57
HERC1-211ENST00000560983 MTHFSP49914 203 aa5.22□□□□□ -1.57
HERC1-211ENST00000560983 ST5P78524 1137 aa5.22□□□□□ -1.57
HERC1-211ENST00000560983 SND1Q7KZF4 910 aaKnown RBP eCLIP5.22□□□□□ -1.57
HERC1-211ENST00000560983 TMC4Q7Z404 712 aa5.22□□□□□ -1.57
HERC1-211ENST00000560983 RASAL3Q86YV0 1011 aa5.22□□□□□ -1.57
HERC1-211ENST00000560983 DPH2Q9BQC3 489 aaPredicted RBP5.22□□□□□ -1.57
HERC1-211ENST00000560983 ZSWIM5Q9P217 1185 aa5.22□□□□□ -1.57
HERC1-211ENST00000560983 PARP2Q9UGN5 583 aa5.22□□□□□ -1.57
HERC1-211ENST00000560983 AFDNP55196 1824 aaKnown RBP5.21□□□□□ -1.58
HERC1-211ENST00000560983 DNAJC25-GNG10A0A024R161 153 aa5.21□□□□□ -1.58
HERC1-211ENST00000560983 A0A087WZG4 1122 aa5.21□□□□□ -1.58
HERC1-211ENST00000560983 WTIPA6NIX2 430 aaPredicted RBP5.21□□□□□ -1.58
HERC1-211ENST00000560983 KRTAP9-7A8MTY7 169 aa5.21□□□□□ -1.58
HERC1-211ENST00000560983 ADM5C9JUS6 153 aa5.21□□□□□ -1.58
HERC1-211ENST00000560983 CFPP27918 469 aa5.21□□□□□ -1.58
HERC1-211ENST00000560983 ALDH1B1P30837 517 aa5.21□□□□□ -1.58
HERC1-211ENST00000560983 SLC39A6Q13433 755 aa5.21□□□□□ -1.58
HERC1-211ENST00000560983 TAF1CQ15572 869 aaPredicted RBP5.21□□□□□ -1.58
HERC1-211ENST00000560983 MAP3K11Q16584 847 aa5.21□□□□□ -1.58
HERC1-211ENST00000560983 RALGPS1Q5JS13 557 aa5.21□□□□□ -1.58
HERC1-211ENST00000560983 OTOP1Q7RTM1 612 aa5.21□□□□□ -1.58
HERC1-211ENST00000560983 FBXO33Q7Z6M2 555 aa5.21□□□□□ -1.58
HERC1-211ENST00000560983 CYB5D2Q8WUJ1 264 aa5.21□□□□□ -1.58
HERC1-211ENST00000560983 RHOVQ96L33 236 aa5.21□□□□□ -1.58
HERC1-211ENST00000560983 TMEM59LQ9UK28 342 aa5.21□□□□□ -1.58
HERC1-211ENST00000560983 TLR6Q9Y2C9 796 aa5.21□□□□□ -1.58
HERC1-211ENST00000560983 PTPN22Q9Y2R2 807 aa5.21□□□□□ -1.58
HERC1-211ENST00000560983 TRIM17Q9Y577 477 aa5.21□□□□□ -1.58
HERC1-211ENST00000560983 RAB3GAP2Q9H2M9 1393 aa5.2□□□□□ -1.58
HERC1-211ENST00000560983 NPC1L1Q9UHC9 1359 aa5.2□□□□□ -1.58
HERC1-211ENST00000560983 WASH4PA8MWX3 477 aa5.2□□□□□ -1.58
HERC1-211ENST00000560983 CAMTA2O94983 1202 aa5.2□□□□□ -1.58
HERC1-211ENST00000560983 MED14OSP0DP75 135 aa5.2□□□□□ -1.58
HERC1-211ENST00000560983 PLA2G5P39877 138 aa5.2□□□□□ -1.58
HERC1-211ENST00000560983 RAP1GAPP47736 663 aa5.2□□□□□ -1.58
HERC1-211ENST00000560983 CAP1Q01518 475 aa5.2□□□□□ -1.58
HERC1-211ENST00000560983 LMNB2Q03252 620 aa5.2□□□□□ -1.58
HERC1-211ENST00000560983 PLEKHO1Q53GL0 409 aaPredicted RBP5.2□□□□□ -1.58
HERC1-211ENST00000560983 Q7L0L9 218 aa5.2□□□□□ -1.58
HERC1-211ENST00000560983 KRT26Q7Z3Y9 468 aa5.2□□□□□ -1.58
HERC1-211ENST00000560983 TTC6Q86TZ1 520 aa5.2□□□□□ -1.58
HERC1-211ENST00000560983 SLFN12Q8IYM2 578 aa5.2□□□□□ -1.58
HERC1-211ENST00000560983 DTWD2Q8NBA8 298 aa5.2□□□□□ -1.58
HERC1-211ENST00000560983 FBXO15Q8NCQ5 510 aaPredicted RBP5.2□□□□□ -1.58
HERC1-211ENST00000560983 MTMR10Q9NXD2 777 aa5.2□□□□□ -1.58
HERC1-211ENST00000560983 SLAMF8Q9P0V8 285 aa5.2□□□□□ -1.58
HERC1-211ENST00000560983 CNOT7Q9UIV1 285 aaKnown RBP5.2□□□□□ -1.58
HERC1-211ENST00000560983 ZNRF3Q9ULT6 936 aa5.2□□□□□ -1.58
HERC1-211ENST00000560983 CORINQ9Y5Q5 1042 aa5.2□□□□□ -1.58
HERC1-211ENST00000560983 COL11A2P13942 1736 aaPredicted RBP5.2□□□□□ -1.58
HERC1-211ENST00000560983 A0A1W2PPC1 479 aa5.19□□□□□ -1.58
HERC1-211ENST00000560983 PPM1GO15355 546 aaPredicted RBP5.19□□□□□ -1.58
HERC1-211ENST00000560983 EIF4A2Q14240 407 aaKnown RBP5.19□□□□□ -1.58
HERC1-211ENST00000560983 ZNF530Q6P9A1 599 aaPredicted RBP5.19□□□□□ -1.58
HERC1-211ENST00000560983 BNC2Q6ZN30 1099 aaPredicted RBP5.19□□□□□ -1.58
HERC1-211ENST00000560983 SYDE1Q6ZW31 735 aaPredicted RBP5.19□□□□□ -1.58
HERC1-211ENST00000560983 TSPYL5Q86VY4 417 aaPredicted RBP5.19□□□□□ -1.58
HERC1-211ENST00000560983 SIAH1Q8IUQ4 282 aa5.19□□□□□ -1.58
HERC1-211ENST00000560983 NIM1KQ8IY84 436 aa5.19□□□□□ -1.58
HERC1-211ENST00000560983 DEFB123Q8N688 67 aa5.19□□□□□ -1.58
HERC1-211ENST00000560983 ABHD4Q8TB40 342 aa5.19□□□□□ -1.58
HERC1-211ENST00000560983 RNF141Q8WVD5 230 aa5.19□□□□□ -1.58
HERC1-211ENST00000560983 GATAD2BQ8WXI9 593 aa5.19□□□□□ -1.58
HERC1-211ENST00000560983 ZNF333Q96JL9 665 aa5.19□□□□□ -1.58
HERC1-211ENST00000560983 TOX2Q96NM4 488 aa5.19□□□□□ -1.58
HERC1-211ENST00000560983 TRIT1Q9H3H1 467 aaKnown RBP5.19□□□□□ -1.58
HERC1-211ENST00000560983 ZNF281Q9Y2X9 895 aa5.19□□□□□ -1.58
HERC1-211ENST00000560983 ANKRD31Q8N7Z5 1873 aa5.19□□□□□ -1.58
HERC1-211ENST00000560983 TRPM7Q96QT4 1865 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 H7C1D1 291 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 NPHP1O15259 732 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 ZGLP1P0C6A0 271 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 C1QTNF9P0C862 333 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 GARTP22102 1010 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 TPP2P29144 1249 aaPredicted RBP5.18□□□□□ -1.58
HERC1-211ENST00000560983 ERVFC1P60507 584 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 CAMK2GQ13555 558 aaPredicted RBP5.18□□□□□ -1.58
HERC1-211ENST00000560983 CRY2Q49AN0 593 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 AMOTQ4VCS5 1084 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 MPZL3Q6UWV2 235 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 LCNL1Q6ZST4 164 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 MOB2Q70IA6 237 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 NBPF5PQ86XG9 351 aaPredicted RBP5.18□□□□□ -1.58
HERC1-211ENST00000560983 DPF3Q92784 378 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 VWCEQ96DN2 955 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 CRELD1Q96HD1 420 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 RSRP1Q9BUV0 290 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms