RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 CCSER1Q9C0I3 900 aa18.14■□□□□ 0.49
TPM1-228ENST00000560975 LRRC4CQ9HCJ2 640 aa18.14■□□□□ 0.49
TPM1-228ENST00000560975 PCDHA4Q9UN74 947 aa18.14■□□□□ 0.49
TPM1-228ENST00000560975 NFS1Q9Y697 457 aa18.14■□□□□ 0.49
TPM1-228ENST00000560975 PPP1R7Q15435 360 aa18.14■□□□□ 0.49
TPM1-228ENST00000560975 DYMQ7RTS9 669 aa18.14■□□□□ 0.49
TPM1-228ENST00000560975 CCDC84Q86UT8 332 aaPredicted RBP18.14■□□□□ 0.49
TPM1-228ENST00000560975 TBC1D5Q92609 795 aa18.14■□□□□ 0.49
TPM1-228ENST00000560975 TCP11L1Q9NUJ3 509 aa18.14■□□□□ 0.49
TPM1-228ENST00000560975 A0A1B0GUA9 196 aa18.13■□□□□ 0.49
TPM1-228ENST00000560975 USP17L12C9JPN9 530 aa18.13■□□□□ 0.49
TPM1-228ENST00000560975 USP17L21D6R901 530 aa18.13■□□□□ 0.49
TPM1-228ENST00000560975 ECHS1P30084 290 aa18.13■□□□□ 0.49
TPM1-228ENST00000560975 GKAP1Q5VSY0 366 aaPredicted RBP18.13■□□□□ 0.49
TPM1-228ENST00000560975 DNAAF5Q86Y56 855 aa18.13■□□□□ 0.49
TPM1-228ENST00000560975 C1orf131Q8NDD1 294 aaKnown RBP18.13■□□□□ 0.49
TPM1-228ENST00000560975 TAF4BQ92750 862 aa18.13■□□□□ 0.49
TPM1-228ENST00000560975 ISCUQ9H1K1 167 aa18.13■□□□□ 0.49
TPM1-228ENST00000560975 PCDH11XQ9BZA7 1347 aa18.13■□□□□ 0.49
TPM1-228ENST00000560975 PCDH11YQ9BZA8 1340 aa18.13■□□□□ 0.49
TPM1-228ENST00000560975 CRYMQ14894 314 aa18.13■□□□□ 0.49
TPM1-228ENST00000560975 KIAA0753Q2KHM9 967 aa18.13■□□□□ 0.49
TPM1-228ENST00000560975 SLC9C1Q4G0N8 1177 aa18.13■□□□□ 0.49
TPM1-228ENST00000560975 MEI1Q5TIA1 1274 aa18.13■□□□□ 0.49
TPM1-228ENST00000560975 NAIF1Q69YI7 327 aaPredicted RBP18.13■□□□□ 0.49
TPM1-228ENST00000560975 LRIG3Q6UXM1 1119 aa18.13■□□□□ 0.49
TPM1-228ENST00000560975 SRRM3A6NNA2 597 aaPredicted RBP18.13■□□□□ 0.49
TPM1-228ENST00000560975 CEP104O60308 925 aa18.13■□□□□ 0.49
TPM1-228ENST00000560975 LRRC41Q15345 812 aa18.13■□□□□ 0.49
TPM1-228ENST00000560975 CNNM4Q6P4Q7 775 aa18.13■□□□□ 0.49
TPM1-228ENST00000560975 IQCDQ96DY2 449 aa18.13■□□□□ 0.49
TPM1-228ENST00000560975 KANSL2Q9H9L4 492 aa18.13■□□□□ 0.49
TPM1-228ENST00000560975 GRID2IPA4D2P6 1211 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 TLR2O60603 784 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 SLC8A1P32418 973 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 NAB2Q15742 525 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 KRT71Q3SY84 523 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 RUFY4Q6ZNE9 571 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 TATDN2Q93075 761 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 DDX47Q9H0S4 455 aaKnown RBP18.12■□□□□ 0.49
TPM1-228ENST00000560975 NOD2Q9HC29 1040 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 PCDHA6Q9UN73 950 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 PCDHA8Q9Y5H6 950 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 FLT1P17948 1338 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 TECP42680 631 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 XRCC4Q13426 336 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 SFMBT2Q5VUG0 894 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 CENPPQ6IPU0 288 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 TLDC1Q6P9B6 456 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 STAG2Q8N3U4 1231 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 TCP11Q8WWU5 503 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 LRRC45Q96CN5 670 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 TRIM6Q9C030 488 aaPredicted RBP18.12■□□□□ 0.49
TPM1-228ENST00000560975 ATP6V0A4Q9HBG4 840 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 ASAP1Q9ULH1 1129 aa18.12■□□□□ 0.49
TPM1-228ENST00000560975 BAZ2AQ9UIF9 1905 aaKnown RBP18.11■□□□□ 0.49
TPM1-228ENST00000560975 ATP6V1G2O95670 118 aa18.11■□□□□ 0.49
TPM1-228ENST00000560975 POLR2FP61218 127 aaKnown RBP18.11■□□□□ 0.49
TPM1-228ENST00000560975 ELF3P78545 371 aaPredicted RBP18.11■□□□□ 0.49
TPM1-228ENST00000560975 HEATR3Q7Z4Q2 680 aa18.11■□□□□ 0.49
TPM1-228ENST00000560975 CCT6BQ92526 530 aa18.11■□□□□ 0.49
TPM1-228ENST00000560975 STAMBPL1Q96FJ0 436 aa18.11■□□□□ 0.49
TPM1-228ENST00000560975 THOC1Q96FV9 657 aaKnown RBP18.11■□□□□ 0.49
TPM1-228ENST00000560975 C7orf25Q9BPX7 421 aa18.11■□□□□ 0.49
TPM1-228ENST00000560975 ADAMTS1Q9UHI8 967 aa18.11■□□□□ 0.49
TPM1-228ENST00000560975 BUB1BO60566 1050 aaPredicted RBP18.11■□□□□ 0.49
TPM1-228ENST00000560975 KCNMA1Q12791 1236 aa18.11■□□□□ 0.49
TPM1-228ENST00000560975 LETM2Q2VYF4 491 aa18.11■□□□□ 0.49
TPM1-228ENST00000560975 PNMA8AQ86V59 439 aaPredicted RBP18.11■□□□□ 0.49
TPM1-228ENST00000560975 A0A087X0T9 212 aa18.1■□□□□ 0.49
TPM1-228ENST00000560975 SSU72P8A0A1W2PR75 194 aa18.1■□□□□ 0.49
TPM1-228ENST00000560975 DAPK3O43293 454 aa18.1■□□□□ 0.49
TPM1-228ENST00000560975 CLTAP09496 248 aa18.1■□□□□ 0.49
TPM1-228ENST00000560975 FAM228BP0C875 321 aa18.1■□□□□ 0.49
TPM1-228ENST00000560975 MYO1EQ12965 1108 aa18.1■□□□□ 0.49
TPM1-228ENST00000560975 BIRC3Q13489 604 aa18.1■□□□□ 0.49
TPM1-228ENST00000560975 RAPGEF1Q13905 1077 aa18.1■□□□□ 0.49
TPM1-228ENST00000560975 RPS6KA1Q15418 735 aa18.1■□□□□ 0.49
TPM1-228ENST00000560975 GLIS3Q8NEA6 775 aa18.1■□□□□ 0.49
TPM1-228ENST00000560975 RIOK1Q9BRS2 568 aaKnown RBP18.1■□□□□ 0.49
TPM1-228ENST00000560975 MGRN1O60291 552 aa18.1■□□□□ 0.49
TPM1-228ENST00000560975 CYP2D6P10635 497 aa18.1■□□□□ 0.49
TPM1-228ENST00000560975 LSM14BQ9BX40 385 aaKnown RBP18.1■□□□□ 0.49
TPM1-228ENST00000560975 CCNT1O60563 726 aaKnown RBP18.09■□□□□ 0.49
TPM1-228ENST00000560975 CLSTN1O94985 981 aa18.09■□□□□ 0.49
TPM1-228ENST00000560975 MYBP10242 640 aa18.09■□□□□ 0.49
TPM1-228ENST00000560975 DRD4P21917 467 aa18.09■□□□□ 0.49
TPM1-228ENST00000560975 IFFO1Q0D2I5 559 aa18.09■□□□□ 0.49
TPM1-228ENST00000560975 LACTB2Q53H82 288 aaPredicted RBP18.09■□□□□ 0.49
TPM1-228ENST00000560975 FAM83BQ5T0W9 1011 aa18.09■□□□□ 0.49
TPM1-228ENST00000560975 CARD10Q9BWT7 1032 aa18.09■□□□□ 0.49
TPM1-228ENST00000560975 TRIM31Q9BZY9 425 aa18.09■□□□□ 0.49
TPM1-228ENST00000560975 DPH5Q9H2P9 285 aa18.09■□□□□ 0.49
TPM1-228ENST00000560975 C5orf60A6NFR6 353 aa18.09■□□□□ 0.49
TPM1-228ENST00000560975 WTIPA6NIX2 430 aaPredicted RBP18.09■□□□□ 0.49
TPM1-228ENST00000560975 TSPY2A6NKD2 308 aa18.09■□□□□ 0.49
TPM1-228ENST00000560975 F8W031 263 aaPredicted RBP18.09■□□□□ 0.49
TPM1-228ENST00000560975 SART1O43290 800 aaKnown RBP18.09■□□□□ 0.49
TPM1-228ENST00000560975 FMNL3Q8IVF7 1028 aa18.09■□□□□ 0.49
TPM1-228ENST00000560975 C3orf20Q8ND61 904 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms