RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 DGKDQ16760 1214 aa12.45□□□□□ -0.42
TPM1-227ENST00000560970 LY6KQ17RY6 165 aa12.45□□□□□ -0.42
TPM1-227ENST00000560970 ADCK5Q3MIX3 580 aa12.45□□□□□ -0.42
TPM1-227ENST00000560970 IFIT1BQ5T764 474 aaKnown RBP12.45□□□□□ -0.42
TPM1-227ENST00000560970 FBXO11Q86XK2 927 aa12.45□□□□□ -0.42
TPM1-227ENST00000560970 ARNTL2Q8WYA1 636 aa12.45□□□□□ -0.42
TPM1-227ENST00000560970 CTAGE1Q96RT6 745 aa12.45□□□□□ -0.42
TPM1-227ENST00000560970 CERS4Q9HA82 394 aa12.45□□□□□ -0.42
TPM1-227ENST00000560970 PXMP2Q9NR77 195 aa12.45□□□□□ -0.42
TPM1-227ENST00000560970 GTF2IRD1Q9UHL9 959 aa12.45□□□□□ -0.42
TPM1-227ENST00000560970 MRPL11Q9Y3B7 192 aaKnown RBP12.45□□□□□ -0.42
TPM1-227ENST00000560970 LOXHD1Q8IVV2 1947 aa12.45□□□□□ -0.42
TPM1-227ENST00000560970 IFIT3O14879 490 aaKnown RBP12.44□□□□□ -0.42
TPM1-227ENST00000560970 PRC1O43663 620 aa12.44□□□□□ -0.42
TPM1-227ENST00000560970 TLL1O43897 1013 aa12.44□□□□□ -0.42
TPM1-227ENST00000560970 ZNF286BP0CG31 522 aa12.44□□□□□ -0.42
TPM1-227ENST00000560970 EIF2AK2P19525 551 aaKnown RBP12.44□□□□□ -0.42
TPM1-227ENST00000560970 CASTP20810 708 aaKnown RBP12.44□□□□□ -0.42
TPM1-227ENST00000560970 KCNQ1P51787 676 aa12.44□□□□□ -0.42
TPM1-227ENST00000560970 ARHGEF16Q5VV41 709 aa12.44□□□□□ -0.42
TPM1-227ENST00000560970 CNKSR3Q6P9H4 555 aa12.44□□□□□ -0.42
TPM1-227ENST00000560970 PPTC7Q8NI37 304 aa12.44□□□□□ -0.42
TPM1-227ENST00000560970 IGDCC4Q8TDY8 1250 aa12.44□□□□□ -0.42
TPM1-227ENST00000560970 DHX38Q92620 1227 aaKnown RBP12.44□□□□□ -0.42
TPM1-227ENST00000560970 KAT2BQ92831 832 aa12.44□□□□□ -0.42
TPM1-227ENST00000560970 KCNB2Q92953 911 aa12.44□□□□□ -0.42
TPM1-227ENST00000560970 NECAB3Q96P71 396 aaPredicted RBP12.44□□□□□ -0.42
TPM1-227ENST00000560970 TAAR1Q96RJ0 339 aa12.44□□□□□ -0.42
TPM1-227ENST00000560970 LRRC2Q9BYS8 371 aa12.44□□□□□ -0.42
TPM1-227ENST00000560970 LY9Q9HBG7 655 aa12.44□□□□□ -0.42
TPM1-227ENST00000560970 MRVI1Q9Y6F6 885 aa12.44□□□□□ -0.42
TPM1-227ENST00000560970 RFXAPO00287 272 aa12.43□□□□□ -0.42
TPM1-227ENST00000560970 SH2B2O14492 632 aaPredicted RBP12.43□□□□□ -0.42
TPM1-227ENST00000560970 CXCL10P02778 98 aa12.43□□□□□ -0.42
TPM1-227ENST00000560970 HSD17B4P51659 736 aa12.43□□□□□ -0.42
TPM1-227ENST00000560970 GHRHRQ02643 423 aa12.43□□□□□ -0.42
TPM1-227ENST00000560970 WTAPQ15007 396 aa12.43□□□□□ -0.42
TPM1-227ENST00000560970 STAG2Q8N3U4 1231 aa12.43□□□□□ -0.42
TPM1-227ENST00000560970 C7orf31Q8N865 590 aa12.43□□□□□ -0.42
TPM1-227ENST00000560970 JMJD4Q9H9V9 463 aa12.43□□□□□ -0.42
TPM1-227ENST00000560970 COG5Q9UP83 839 aa12.43□□□□□ -0.42
TPM1-227ENST00000560970 LCHNA4D1U4 455 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 OPLAHO14841 1288 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 EFCAB14O75071 495 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 EIF3JO75822 258 aaKnown RBP12.42□□□□□ -0.42
TPM1-227ENST00000560970 REC8O95072 547 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 CFBP00751 764 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 CKBP12277 381 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 HOXD8P13378 290 aaPredicted RBP12.42□□□□□ -0.42
TPM1-227ENST00000560970 BMP1P13497 986 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 HSPA4P34932 840 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 PSEN2P49810 448 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 DEFB103AP81534 67 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 GRB10Q13322 594 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 MFSD10Q14728 455 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 SLC35G1Q2M3R5 365 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 TSGA10IPQ3SY00 556 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 RNF20Q5VTR2 975 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 KRT40Q6A162 431 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 GDPD5Q8WTR4 605 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 TBC1D5Q92609 795 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 TCEANC2Q96MN5 208 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 MYL10Q9BUA6 226 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 AMNQ9BXJ7 453 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 HDAC6Q9UBN7 1215 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 MAD2L2Q9UI95 211 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 DDX41Q9UJV9 622 aaKnown RBP12.42□□□□□ -0.42
TPM1-227ENST00000560970 SNX14Q9Y5W7 946 aa12.42□□□□□ -0.42
TPM1-227ENST00000560970 EMSYQ7Z589 1322 aa12.41□□□□□ -0.42
TPM1-227ENST00000560970 ERICH2A1L162 156 aa12.41□□□□□ -0.42
TPM1-227ENST00000560970 HAS3O00219 553 aa12.41□□□□□ -0.42
TPM1-227ENST00000560970 LPXNO60711 386 aa12.41□□□□□ -0.42
TPM1-227ENST00000560970 NBNO60934 754 aa12.41□□□□□ -0.42
TPM1-227ENST00000560970 NR3C2P08235 984 aa12.41□□□□□ -0.42
TPM1-227ENST00000560970 CPA1P15085 419 aa12.41□□□□□ -0.42
TPM1-227ENST00000560970 MCM5P33992 734 aa12.41□□□□□ -0.42
TPM1-227ENST00000560970 PTK7Q13308 1070 aa12.41□□□□□ -0.42
TPM1-227ENST00000560970 LAMC2Q13753 1193 aa12.41□□□□□ -0.42
TPM1-227ENST00000560970 GPNMBQ14956 572 aa12.41□□□□□ -0.42
TPM1-227ENST00000560970 SART3Q15020 963 aaKnown RBP12.41□□□□□ -0.42
TPM1-227ENST00000560970 KIAA0753Q2KHM9 967 aa12.41□□□□□ -0.42
TPM1-227ENST00000560970 SPRED2Q7Z698 418 aa12.41□□□□□ -0.42
TPM1-227ENST00000560970 NEK1Q96PY6 1258 aa12.41□□□□□ -0.42
TPM1-227ENST00000560970 PDCD2LQ9BRP1 358 aa12.41□□□□□ -0.42
TPM1-227ENST00000560970 ALG1Q9BT22 464 aa12.41□□□□□ -0.42
TPM1-227ENST00000560970 MAP3K20Q9NYL2 800 aaKnown RBP12.41□□□□□ -0.42
TPM1-227ENST00000560970 ABHD14A-ACY1A0A1B0GW23 586 aa12.4□□□□□ -0.42
TPM1-227ENST00000560970 PPP1R11O60927 126 aaPredicted RBP12.4□□□□□ -0.42
TPM1-227ENST00000560970 GJB5O95377 273 aa12.4□□□□□ -0.42
TPM1-227ENST00000560970 UBA1P22314 1058 aaKnown RBP12.4□□□□□ -0.42
TPM1-227ENST00000560970 EXOSC10Q01780 885 aaKnown RBP12.4□□□□□ -0.42
TPM1-227ENST00000560970 TROAPQ12815 778 aa12.4□□□□□ -0.42
TPM1-227ENST00000560970 GRM4Q14833 912 aa12.4□□□□□ -0.42
TPM1-227ENST00000560970 TRIM71Q2Q1W2 868 aaKnown RBP12.4□□□□□ -0.42
TPM1-227ENST00000560970 KCNV1Q6PIU1 500 aa12.4□□□□□ -0.42
TPM1-227ENST00000560970 TMCO2Q7Z6W1 182 aaPredicted RBP12.4□□□□□ -0.42
TPM1-227ENST00000560970 RAB11FIP4Q86YS3 637 aa12.4□□□□□ -0.42
TPM1-227ENST00000560970 DHX37Q8IY37 1157 aaKnown RBP12.4□□□□□ -0.42
TPM1-227ENST00000560970 ZNF654Q8IZM8 581 aa12.4□□□□□ -0.42
TPM1-227ENST00000560970 MTMR8Q96EF0 704 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms