RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 USP17L22D6RA61 530 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 USP17L17D6RBQ6 530 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 USP17L19D6RCP7 530 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 USP17L20D6RJB6 530 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 JAK2O60674 1132 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 GOLGA8HP0CJ92 632 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 CETPP11597 493 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 TM4SF4P48230 202 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 HMGCS2P54868 508 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 ATP2B2Q01814 1243 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 GHRHRQ02643 423 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 DHX9Q08211 1270 aaKnown RBP6.33□□□□□ -1.4
ZEB1-220ENST00000560909 USP17L24Q0WX57 530 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 STK3Q13188 491 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 COG2Q14746 738 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 PFKFB3Q16875 520 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-220ENST00000560909 FAM83BQ5T0W9 1011 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 SYDE2Q5VT97 1194 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 KCTD1Q719H9 257 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 ANKRD23Q86SG2 305 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 RAB11FIP4Q86YS3 637 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 ADGRF4Q8IZF3 695 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 NUP133Q8WUM0 1156 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 SHISA4Q96DD7 197 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 NUP88Q99567 741 aaPredicted RBP6.33□□□□□ -1.4
ZEB1-220ENST00000560909 PTPN18Q99952 460 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 MAF1Q9H063 256 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 RANBP17Q9H2T7 1088 aaKnown RBP6.33□□□□□ -1.4
ZEB1-220ENST00000560909 ZNF408Q9H9D4 720 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 SLC38A10Q9HBR0 1119 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 SH3GLB2Q9NR46 395 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 HOXC10Q9NYD6 342 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 PNMA2Q9UL42 364 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 PPP1R9AQ9ULJ8 1098 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 PRR12Q9ULL5 1215 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 PHF24Q9UPV7 400 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 AGTPBP1Q9UPW5 1226 aa6.33□□□□□ -1.4
ZEB1-220ENST00000560909 TRPM7Q96QT4 1865 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 ZNF536O15090 1300 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 OTOFQ9HC10 1997 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 ESYT2A0FGR8 921 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 MANSC4A6NHS7 340 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-220ENST00000560909 BTBD19C9JJ37 291 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 TMEM232C9JQI7 657 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 hCG_1984214I3L0E3 225 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 VWA5AO00534 786 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 CPLX1O14810 134 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 ZBTB5O15062 677 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 PPP1R11O60927 126 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-220ENST00000560909 DEXIO95424 95 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 ADH1AP07327 375 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 BMP4P12644 408 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 PTGIRP43119 386 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 RNF144AP50876 292 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-220ENST00000560909 ZNF157P51786 506 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-220ENST00000560909 STAT2P52630 851 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 OAZ1P54368 228 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 SSRP1Q08945 709 aaKnown RBP6.32□□□□□ -1.4
ZEB1-220ENST00000560909 DGKZQ13574 1117 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 NPY5RQ15761 445 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 PRRT3Q5FWE3 981 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 TREML2Q5T2D2 321 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 NOL8Q76FK4 1167 aaKnown RBP6.32□□□□□ -1.4
ZEB1-220ENST00000560909 CCDC144CPQ8IYA2 1237 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 SPICE1Q8N0Z3 855 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 ZNF713Q8N859 430 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-220ENST00000560909 MB21D1Q8N884 522 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 FBXO18Q8NFZ0 1043 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 WASF1Q92558 559 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 PHKBQ93100 1093 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 FEZ1Q99689 392 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 SLF1Q9BQI6 1058 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 UBA5Q9GZZ9 404 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 RPAP3Q9H6T3 665 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-220ENST00000560909 FBXO28Q9NVF7 368 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 BARHL2Q9NY43 387 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 TMOD4Q9NZQ9 345 aa6.32□□□□□ -1.4
ZEB1-220ENST00000560909 ORC3Q9UBD5 711 aaPredicted RBP6.32□□□□□ -1.4
ZEB1-220ENST00000560909 FRMPD2Q68DX3 1309 aaPredicted RBP6.31□□□□□ -1.4
ZEB1-220ENST00000560909 ADGRA2Q96PE1 1338 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 MYH8P13535 1937 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 M0R2N6 131 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 C2CD2LO14523 706 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 SCG2P13521 617 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 PDCP20941 246 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 SYT1P21579 422 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 GJB2P29033 226 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 SLC16A2P36021 539 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 MAP2K2P36507 400 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 TRAF1Q13077 416 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 NOGQ13253 232 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 PABPC4Q13310 644 aaKnown RBP eCLIP6.31□□□□□ -1.4
ZEB1-220ENST00000560909 CCDC96Q2M329 555 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 QRICH1Q2TAL8 776 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 DEFB115Q30KQ5 88 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 GALNT17Q6IS24 598 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 CMTR1Q8N1G2 835 aaKnown RBP6.31□□□□□ -1.4
ZEB1-220ENST00000560909 SAMD3Q8N6K7 520 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 DAGLBQ8NCG7 672 aa6.31□□□□□ -1.4
ZEB1-220ENST00000560909 GTF3C2Q8WUA4 911 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms