RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 PRKG1Q13976 671 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 WNK4Q96J92 1243 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 MXRA8Q9BRK3 442 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 EXOC1Q9NV70 894 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 ZNF214Q9UL59 606 aaPredicted RBP14.44□□□□□ -0.1
SNX1-211ENST00000560829 KIAA1024Q9UPX6 916 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 CTNND2Q9UQB3 1225 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 CSADQ9Y600 493 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 PHIPQ8WWQ0 1821 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 POTEB3A0JP26 581 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 POTECB2RU33 542 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 SPATA31C1P0DKV0 1188 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 STX17P56962 302 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 GSDMDP57764 484 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 EHHADHQ08426 723 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 PPP2R5CQ13362 524 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 STIM1Q13586 685 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 DHX8Q14562 1220 aaKnown RBP14.44□□□□□ -0.1
SNX1-211ENST00000560829 PCNX4Q63HM2 1172 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 POTEBQ6S5H4 581 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 B3GNT9Q6UX72 402 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 DLK2Q6UY11 383 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 OTOP1Q7RTM1 612 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 APTXQ7Z2E3 356 aaKnown RBP14.44□□□□□ -0.1
SNX1-211ENST00000560829 CATSPER3Q86XQ3 398 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 NELFBQ8WX92 580 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 DHTKD1Q96HY7 919 aaPredicted RBP14.44□□□□□ -0.1
SNX1-211ENST00000560829 NAP1L5Q96NT1 182 aaPredicted RBP14.44□□□□□ -0.1
SNX1-211ENST00000560829 TRERF1Q96PN7 1200 aa14.44□□□□□ -0.1
SNX1-211ENST00000560829 POLR3CQ9BUI4 534 aaPredicted RBP14.44□□□□□ -0.1
SNX1-211ENST00000560829 PSMA7O14818 248 aa14.43□□□□□ -0.1
SNX1-211ENST00000560829 CDK11BP21127 795 aaKnown RBP14.43□□□□□ -0.1
SNX1-211ENST00000560829 RPS6P62753 249 aaKnown RBP14.43□□□□□ -0.1
SNX1-211ENST00000560829 NCAPH2Q6IBW4 605 aa14.43□□□□□ -0.1
SNX1-211ENST00000560829 DDX12PQ92771 950 aa14.43□□□□□ -0.1
SNX1-211ENST00000560829 CDCA5Q96FF9 252 aa14.43□□□□□ -0.1
SNX1-211ENST00000560829 INTS13Q9NVM9 706 aa14.43□□□□□ -0.1
SNX1-211ENST00000560829 HOXC10Q9NYD6 342 aa14.43□□□□□ -0.1
SNX1-211ENST00000560829 SPDYE16A6NNV3 312 aaPredicted RBP14.42□□□□□ -0.1
SNX1-211ENST00000560829 E9PMD0 336 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 GRIN3BO60391 1043 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 PLA2G4BP0C869 781 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 ITGB5P18084 799 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 UBXN2AP68543 259 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 PPATQ06203 517 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 STK4Q13043 487 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 PSMD2Q13200 908 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 TKFCQ3LXA3 575 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 LRCH2Q5VUJ6 765 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 VSTM4Q8IW00 320 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 DNAJC19Q96DA6 116 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 UIMC1Q96RL1 719 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 RIT2Q99578 217 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 WDR11Q9BZH6 1224 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 RNF146Q9NTX7 359 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 RIPK3Q9Y572 518 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 UBIAD1Q9Y5Z9 338 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 A0A1B0GTH6 734 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 IQCA1LA6NCM1 817 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 LRRC10BA6NIK2 292 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 MUTP22033 750 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 NF2P35240 595 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 SPAG1Q07617 926 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 TMEM132BQ14DG7 1078 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 GPR162Q16538 588 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 SNRNP48Q6IEG0 339 aaKnown RBP14.42□□□□□ -0.1
SNX1-211ENST00000560829 RNF207Q6ZRF8 634 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 FILIP1Q7Z7B0 1213 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 LRRC8AQ8IWT6 810 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 ANKRD13AQ8IZ07 590 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 CACTINQ8WUQ7 758 aaKnown RBP14.42□□□□□ -0.1
SNX1-211ENST00000560829 CTAGE1Q96RT6 745 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 HSD17B14Q9BPX1 270 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 TEX13BQ9BXU2 312 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 TAF1DQ9H5J8 278 aaPredicted RBP14.42□□□□□ -0.1
SNX1-211ENST00000560829 TUFT1Q9NNX1 390 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 HOMER2Q9NSB8 354 aa14.42□□□□□ -0.1
SNX1-211ENST00000560829 BMP2KQ9NSY1 1161 aaPredicted RBP14.42□□□□□ -0.1
SNX1-211ENST00000560829 SRCAPQ6ZRS2 3230 aa14.41□□□□□ -0.1
SNX1-211ENST00000560829 POTEFA5A3E0 1075 aa14.41□□□□□ -0.1
SNX1-211ENST00000560829 EML1O00423 815 aa14.41□□□□□ -0.1
SNX1-211ENST00000560829 POTEIP0CG38 1075 aa14.41□□□□□ -0.1
SNX1-211ENST00000560829 ARP10275 920 aa14.41□□□□□ -0.1
SNX1-211ENST00000560829 SLC12A3P55017 1021 aa14.41□□□□□ -0.1
SNX1-211ENST00000560829 TTI2Q6NXR4 508 aa14.41□□□□□ -0.1
SNX1-211ENST00000560829 XRRA1Q6P2D8 792 aa14.41□□□□□ -0.1
SNX1-211ENST00000560829 POTEGQ6S5H5 508 aa14.41□□□□□ -0.1
SNX1-211ENST00000560829 POTEEQ6S8J3 1075 aa14.41□□□□□ -0.1
SNX1-211ENST00000560829 SLC30A10Q6XR72 485 aa14.41□□□□□ -0.1
SNX1-211ENST00000560829 ILDR2Q71H61 639 aa14.41□□□□□ -0.1
SNX1-211ENST00000560829 TMC6Q7Z403 805 aa14.41□□□□□ -0.1
SNX1-211ENST00000560829 ERO1BQ86YB8 467 aa14.41□□□□□ -0.1
SNX1-211ENST00000560829 KIAA0895Q8NCT3 520 aa14.41□□□□□ -0.1
SNX1-211ENST00000560829 KIAA1524Q8TCG1 905 aa14.41□□□□□ -0.1
SNX1-211ENST00000560829 TAAR1Q96RJ0 339 aa14.41□□□□□ -0.1
SNX1-211ENST00000560829 EIF2AK1Q9BQI3 630 aaKnown RBP14.41□□□□□ -0.1
SNX1-211ENST00000560829 ZNF577Q9BSK1 485 aa14.41□□□□□ -0.1
SNX1-211ENST00000560829 LIMA1Q9UHB6 759 aaKnown RBP14.41□□□□□ -0.1
SNX1-211ENST00000560829 DNM3Q9UQ16 869 aa14.41□□□□□ -0.1
SNX1-211ENST00000560829 MAPK8IP1Q9UQF2 711 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms