RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 SP2Q02086 613 aa17.69■□□□□ 0.42
LYSMD2-204ENST00000560491 ARHGAP1Q07960 439 aa17.69■□□□□ 0.42
LYSMD2-204ENST00000560491 NR5A1Q13285 461 aa17.69■□□□□ 0.42
LYSMD2-204ENST00000560491 IFFO2Q5TF58 517 aa17.69■□□□□ 0.42
LYSMD2-204ENST00000560491 TBCKQ8TEA7 893 aa17.69■□□□□ 0.42
LYSMD2-204ENST00000560491 SNX21Q969T3 373 aa17.69■□□□□ 0.42
LYSMD2-204ENST00000560491 MXRA8Q9BRK3 442 aa17.69■□□□□ 0.42
LYSMD2-204ENST00000560491 SPC25Q9HBM1 224 aa17.69■□□□□ 0.42
LYSMD2-204ENST00000560491 JADE2Q9NQC1 790 aa17.69■□□□□ 0.42
LYSMD2-204ENST00000560491 Q9Y3F1 56 aa17.69■□□□□ 0.42
LYSMD2-204ENST00000560491 ALPK3Q96L96 1907 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 FAM205CA6NFA0 338 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 SPATA31C2B4DYI2 1134 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 FAM86B1E9PN63 330 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 EDIL3O43854 480 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 FAM86B2P0C5J1 330 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 CAPN2P17655 700 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 ZNF76P36508 570 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 MTMR1Q13613 665 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 FSCN1Q16658 493 aaKnown RBP17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 CEP55Q53EZ4 464 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 EARS2Q5JPH6 523 aaKnown RBP17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 GNASQ5JWF2 1037 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 KCNV1Q6PIU1 500 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 KRT25Q7Z3Z0 450 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 NLRX1Q86UT6 975 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 DIS3L2Q8IYB7 885 aaKnown RBP17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 GPRASP2Q96D09 838 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 C11orf49Q9H6J7 331 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 BCAS3Q9H6U6 928 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 BRMS1Q9HCU9 246 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 PKD2L1Q9P0L9 805 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 SMC3Q9UQE7 1217 aa17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.68■□□□□ 0.42
LYSMD2-204ENST00000560491 CCDC194A0A1B0GVG4 234 aa17.67■□□□□ 0.42
LYSMD2-204ENST00000560491 BTBD18B2RXH4 712 aa17.67■□□□□ 0.42
LYSMD2-204ENST00000560491 GGPS1O95749 300 aa17.67■□□□□ 0.42
LYSMD2-204ENST00000560491 GH1P01241 217 aa17.67■□□□□ 0.42
LYSMD2-204ENST00000560491 CYP3A4P08684 503 aa17.67■□□□□ 0.42
LYSMD2-204ENST00000560491 COL6A1P12109 1028 aa17.67■□□□□ 0.42
LYSMD2-204ENST00000560491 CST5P28325 142 aaPredicted RBP17.67■□□□□ 0.42
LYSMD2-204ENST00000560491 NKX3-2P78367 333 aa17.67■□□□□ 0.42
LYSMD2-204ENST00000560491 NONOQ15233 471 aaKnown RBP eCLIP17.67■□□□□ 0.42
LYSMD2-204ENST00000560491 KCNA10Q16322 511 aa17.67■□□□□ 0.42
LYSMD2-204ENST00000560491 CCSAPQ6IQ19 270 aaPredicted RBP17.67■□□□□ 0.42
LYSMD2-204ENST00000560491 PIK3AP1Q6ZUJ8 805 aa17.67■□□□□ 0.42
LYSMD2-204ENST00000560491 NECAB2Q7Z6G3 386 aa17.67■□□□□ 0.42
LYSMD2-204ENST00000560491 HSCBQ8IWL3 235 aa17.67■□□□□ 0.42
LYSMD2-204ENST00000560491 FBXO18Q8NFZ0 1043 aa17.67■□□□□ 0.42
LYSMD2-204ENST00000560491 TNFRSF25Q93038 417 aa17.67■□□□□ 0.42
LYSMD2-204ENST00000560491 FERMT2Q96AC1 680 aa17.67■□□□□ 0.42
LYSMD2-204ENST00000560491 FOXD4L1Q9NU39 408 aa17.67■□□□□ 0.42
LYSMD2-204ENST00000560491 IGLV3-22A0A075B6J6 115 aa17.66■□□□□ 0.42
LYSMD2-204ENST00000560491 ATP9AO75110 1047 aa17.66■□□□□ 0.42
LYSMD2-204ENST00000560491 ASGR1P07306 291 aa17.66■□□□□ 0.42
LYSMD2-204ENST00000560491 ARP10275 920 aa17.66■□□□□ 0.42
LYSMD2-204ENST00000560491 TGFB3P10600 412 aa17.66■□□□□ 0.42
LYSMD2-204ENST00000560491 RGS19P49795 217 aa17.66■□□□□ 0.42
LYSMD2-204ENST00000560491 INF2Q27J81 1249 aa17.66■□□□□ 0.42
LYSMD2-204ENST00000560491 CELF3Q5SZQ8 465 aaKnown RBP17.66■□□□□ 0.42
LYSMD2-204ENST00000560491 DHX37Q8IY37 1157 aaKnown RBP17.66■□□□□ 0.42
LYSMD2-204ENST00000560491 AFG1LQ8WV93 481 aa17.66■□□□□ 0.42
LYSMD2-204ENST00000560491 UIMC1Q96RL1 719 aa17.66■□□□□ 0.42
LYSMD2-204ENST00000560491 SENP6Q9GZR1 1112 aaPredicted RBP17.66■□□□□ 0.42
LYSMD2-204ENST00000560491 KCNH7Q9NS40 1196 aa17.66■□□□□ 0.42
LYSMD2-204ENST00000560491 PHF24Q9UPV7 400 aa17.66■□□□□ 0.42
LYSMD2-204ENST00000560491 A0A1W2PQ45 241 aaPredicted RBP17.65■□□□□ 0.42
LYSMD2-204ENST00000560491 A0A1W2PQY0 241 aa17.65■□□□□ 0.42
LYSMD2-204ENST00000560491 MEIS1O00470 390 aa17.65■□□□□ 0.42
LYSMD2-204ENST00000560491 KCNA2P16389 499 aa17.65■□□□□ 0.42
LYSMD2-204ENST00000560491 CPT1AP50416 773 aa17.65■□□□□ 0.42
LYSMD2-204ENST00000560491 ACLYP53396 1101 aa17.65■□□□□ 0.42
LYSMD2-204ENST00000560491 MYSM1Q5VVJ2 828 aa17.65■□□□□ 0.42
LYSMD2-204ENST00000560491 CYFIP1Q7L576 1253 aa17.65■□□□□ 0.42
LYSMD2-204ENST00000560491 PLA2G4DQ86XP0 818 aa17.65■□□□□ 0.42
LYSMD2-204ENST00000560491 PCSK9Q8NBP7 692 aaKnown RBP17.65■□□□□ 0.42
LYSMD2-204ENST00000560491 CDHR1Q96JP9 859 aa17.65■□□□□ 0.42
LYSMD2-204ENST00000560491 TSEN34Q9BSV6 310 aaKnown RBP17.65■□□□□ 0.42
LYSMD2-204ENST00000560491 KIF3AQ9Y496 699 aa17.65■□□□□ 0.42
LYSMD2-204ENST00000560491 TELO2Q9Y4R8 837 aa17.65■□□□□ 0.42
LYSMD2-204ENST00000560491 TDP2O95551 362 aa17.64■□□□□ 0.41
LYSMD2-204ENST00000560491 MMP3P08254 477 aa17.64■□□□□ 0.41
LYSMD2-204ENST00000560491 MYL3P08590 195 aa17.64■□□□□ 0.41
LYSMD2-204ENST00000560491 CIITAP33076 1130 aa17.64■□□□□ 0.41
LYSMD2-204ENST00000560491 USP11P51784 963 aa17.64■□□□□ 0.41
LYSMD2-204ENST00000560491 SP4Q02446 784 aa17.64■□□□□ 0.41
LYSMD2-204ENST00000560491 LAMC2Q13753 1193 aa17.64■□□□□ 0.41
LYSMD2-204ENST00000560491 NEDD9Q14511 834 aa17.64■□□□□ 0.41
LYSMD2-204ENST00000560491 SAFBQ15424 915 aaKnown RBP eCLIP17.64■□□□□ 0.41
LYSMD2-204ENST00000560491 PRR16Q569H4 304 aa17.64■□□□□ 0.41
LYSMD2-204ENST00000560491 CXCL17Q6UXB2 119 aa17.64■□□□□ 0.41
LYSMD2-204ENST00000560491 EMID1Q96A84 441 aaPredicted RBP17.64■□□□□ 0.41
LYSMD2-204ENST00000560491 LENG9Q96B70 501 aa17.64■□□□□ 0.41
LYSMD2-204ENST00000560491 SPATA33Q96N06 139 aa17.64■□□□□ 0.41
LYSMD2-204ENST00000560491 MLXIPQ9HAP2 919 aa17.64■□□□□ 0.41
LYSMD2-204ENST00000560491 AGO4Q9HCK5 861 aaKnown RBP17.64■□□□□ 0.41
LYSMD2-204ENST00000560491 DNAH12Q6ZR08 3092 aa17.64■□□□□ 0.41
LYSMD2-204ENST00000560491 MOXD2PA6NHM9 499 aa17.63■□□□□ 0.41
LYSMD2-204ENST00000560491 A6NJR5 290 aa17.63■□□□□ 0.41
LYSMD2-204ENST00000560491 KIF28PB7ZC32 967 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms