RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 LRRC8DQ7L1W4 858 aa7.93□□□□□ -1.14
HERC1-208ENST00000560462 ADGRD2Q7Z7M1 963 aa7.93□□□□□ -1.14
HERC1-208ENST00000560462 RBM23Q86U06 439 aaKnown RBP7.93□□□□□ -1.14
HERC1-208ENST00000560462 METTL16Q86W50 562 aaKnown RBP7.93□□□□□ -1.14
HERC1-208ENST00000560462 RIOX2Q8IUF8 465 aa7.93□□□□□ -1.14
HERC1-208ENST00000560462 LINS1Q8NG48 757 aa7.93□□□□□ -1.14
HERC1-208ENST00000560462 PRR7Q8TB68 274 aa7.93□□□□□ -1.14
HERC1-208ENST00000560462 CAGE1Q8TC20 777 aa7.93□□□□□ -1.14
HERC1-208ENST00000560462 ATRIPQ8WXE1 791 aa7.93□□□□□ -1.14
HERC1-208ENST00000560462 EPC1Q9H2F5 836 aa7.93□□□□□ -1.14
HERC1-208ENST00000560462 RWDD3Q9Y3V2 267 aa7.93□□□□□ -1.14
HERC1-208ENST00000560462 MAFBQ9Y5Q3 323 aaPredicted RBP7.93□□□□□ -1.14
HERC1-208ENST00000560462 ZNFX1Q9P2E3 1918 aaKnown RBP7.93□□□□□ -1.14
HERC1-208ENST00000560462 MYO9AB2RTY4 2548 aa7.92□□□□□ -1.14
HERC1-208ENST00000560462 MYH13Q9UKX3 1938 aa7.92□□□□□ -1.14
HERC1-208ENST00000560462 AKAP13Q12802 2813 aa7.92□□□□□ -1.14
HERC1-208ENST00000560462 CFAP99D6REC4 459 aa7.92□□□□□ -1.14
HERC1-208ENST00000560462 COPB2P35606 906 aa7.92□□□□□ -1.14
HERC1-208ENST00000560462 SPECC1Q5M775 1068 aa7.92□□□□□ -1.14
HERC1-208ENST00000560462 ARMCX2Q7L311 632 aa7.92□□□□□ -1.14
HERC1-208ENST00000560462 FIBCD1Q8N539 461 aa7.92□□□□□ -1.14
HERC1-208ENST00000560462 NEK1Q96PY6 1258 aa7.92□□□□□ -1.14
HERC1-208ENST00000560462 CHMP4AQ9BY43 222 aa7.92□□□□□ -1.14
HERC1-208ENST00000560462 GNL3LQ9NVN8 582 aaKnown RBP7.92□□□□□ -1.14
HERC1-208ENST00000560462 ABCF2Q9UG63 623 aa7.92□□□□□ -1.14
HERC1-208ENST00000560462 PCDHGA2Q9Y5H1 932 aa7.92□□□□□ -1.14
HERC1-208ENST00000560462 LAMA5O15230 3695 aa7.91□□□□□ -1.14
HERC1-208ENST00000560462 DNAJC25-GNG10A0A024R161 153 aa7.91□□□□□ -1.14
HERC1-208ENST00000560462 SMAPO00193 183 aa7.91□□□□□ -1.14
HERC1-208ENST00000560462 PLA2G2AP14555 144 aa7.91□□□□□ -1.14
HERC1-208ENST00000560462 FGFR2P21802 821 aa7.91□□□□□ -1.14
HERC1-208ENST00000560462 PTGS1P23219 599 aa7.91□□□□□ -1.14
HERC1-208ENST00000560462 PPP2R1AP30153 589 aa7.91□□□□□ -1.14
HERC1-208ENST00000560462 STAT3P40763 770 aa7.91□□□□□ -1.14
HERC1-208ENST00000560462 SLC4A3P48751 1232 aa7.91□□□□□ -1.14
HERC1-208ENST00000560462 CAMK1Q14012 370 aa7.91□□□□□ -1.14
HERC1-208ENST00000560462 ELOAQ14241 798 aaKnown RBP7.91□□□□□ -1.14
HERC1-208ENST00000560462 ZNF528Q3MIS6 628 aa7.91□□□□□ -1.14
HERC1-208ENST00000560462 LRRC24Q50LG9 513 aa7.91□□□□□ -1.14
HERC1-208ENST00000560462 NFRKBQ6P4R8 1299 aa7.91□□□□□ -1.14
HERC1-208ENST00000560462 C19orf48Q6RUI8 117 aa7.91□□□□□ -1.14
HERC1-208ENST00000560462 TEX11Q8IYF3 940 aa7.91□□□□□ -1.14
HERC1-208ENST00000560462 GATA6Q92908 595 aa7.91□□□□□ -1.14
HERC1-208ENST00000560462 KATNBL1Q9H079 304 aa7.91□□□□□ -1.14
HERC1-208ENST00000560462 DENND2AQ9ULE3 1009 aa7.91□□□□□ -1.14
HERC1-208ENST00000560462 SPTA1P02549 2419 aa7.91□□□□□ -1.14
HERC1-208ENST00000560462 FREM2Q5SZK8 3169 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 NLRC5Q86WI3 1866 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 SIPA1L1O43166 1804 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 ATP9BO43861 1147 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 TBC1D4O60343 1298 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 GDF9O60383 454 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 UPP2O95045 317 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 DCNP07585 359 aaKnown RBP7.9□□□□□ -1.14
HERC1-208ENST00000560462 TMPOP42166 694 aaKnown RBP7.9□□□□□ -1.14
HERC1-208ENST00000560462 RBM10P98175 930 aaKnown RBP7.9□□□□□ -1.14
HERC1-208ENST00000560462 PURAQ00577 322 aaKnown RBP7.9□□□□□ -1.14
HERC1-208ENST00000560462 GUCA2AQ02747 115 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 PTPN11Q06124 597 aaPredicted RBP7.9□□□□□ -1.14
HERC1-208ENST00000560462 SPTY2D1Q68D10 685 aaPredicted RBP7.9□□□□□ -1.14
HERC1-208ENST00000560462 ATF7IPQ6VMQ6 1270 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 CCDC144CPQ8IYA2 1237 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 ATP8B4Q8TF62 1192 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 PPP1R13LQ8WUF5 828 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 TSC1Q92574 1164 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 TOP1MTQ969P6 601 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 MTG1Q9BT17 334 aaPredicted RBP7.9□□□□□ -1.14
HERC1-208ENST00000560462 LSM14BQ9BX40 385 aaKnown RBP7.9□□□□□ -1.14
HERC1-208ENST00000560462 S1PR5Q9H228 398 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 TLE6Q9H808 572 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 GPR108Q9NPR9 543 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 ADAMTS8Q9UP79 889 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 Q9Y3F1 56 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 GPSM3Q9Y4H4 160 aa7.9□□□□□ -1.14
HERC1-208ENST00000560462 FSD2A1L4K1 749 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 LRP3O75074 770 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 LGR5O75473 907 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 NTRK1P04629 796 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 MYL3P08590 195 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 SRGAP2BP0DMP2 458 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 NCLP19338 710 aaKnown RBP7.89□□□□□ -1.15
HERC1-208ENST00000560462 SPINK2P20155 84 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 MECOMQ03112 1051 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 PTGISQ16647 500 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 PRR23CQ6ZRP0 262 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 MAML2Q8IZL2 1156 aaPredicted RBP7.89□□□□□ -1.15
HERC1-208ENST00000560462 ZDHHC14Q8IZN3 488 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 TDRD5Q8NAT2 981 aaKnown RBP7.89□□□□□ -1.15
HERC1-208ENST00000560462 SPATA18Q8TC71 538 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 EPS8L1Q8TE68 723 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 LPIN2Q92539 896 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 IL17RAQ96F46 866 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 APOL5Q9BWW9 433 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 IFIH1Q9BYX4 1025 aaKnown RBP7.89□□□□□ -1.15
HERC1-208ENST00000560462 RXFP3Q9NSD7 469 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 DLGAP2Q9P1A6 1054 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 PALD1Q9ULE6 856 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 PLAGL2Q9UPG8 496 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 RAI2Q9Y5P3 530 aa7.89□□□□□ -1.15
HERC1-208ENST00000560462 ADAMTS20P59510 1910 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms