RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 DHTKD1Q96HY7 919 aaPredicted RBP14.65□□□□□ -0.06
TRAF3-208ENST00000560371 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.65□□□□□ -0.06
TRAF3-208ENST00000560371 IFNAR1P17181 557 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 CD209Q9NNX6 404 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 MCAMP43121 646 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 ELMSAN1Q6PJG2 1045 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 GCNAQ96QF7 691 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 RMDN3Q96TC7 470 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 GSTA1P08263 222 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 GSTA2P09210 222 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 ARPP19P56211 112 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 IQGAP3Q86VI3 1631 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 CLIC2O15247 247 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 UBE2SQ16763 222 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 PPFIBP2Q8ND30 876 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 GIMAP8Q8ND71 665 aaPredicted RBP14.65□□□□□ -0.06
TRAF3-208ENST00000560371 MCUR1Q96AQ8 359 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 RPF1Q9H9Y2 349 aaKnown RBP14.65□□□□□ -0.06
TRAF3-208ENST00000560371 PCDHA5Q9Y5H7 936 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 SH2B2O14492 632 aaPredicted RBP14.65□□□□□ -0.06
TRAF3-208ENST00000560371 RGS16O15492 202 aaPredicted RBP14.65□□□□□ -0.06
TRAF3-208ENST00000560371 ATXN8OSP0DMR3 200 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 ATP11AP98196 1134 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 PPP1R16BQ96T49 567 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 PCIF1Q9H4Z3 704 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 KIF9Q9HAQ2 790 aa14.65□□□□□ -0.06
TRAF3-208ENST00000560371 GOLGA8CPA6NN73 597 aa14.64□□□□□ -0.07
TRAF3-208ENST00000560371 LIFRP42702 1097 aa14.64□□□□□ -0.07
TRAF3-208ENST00000560371 PPARDQ03181 441 aa14.64□□□□□ -0.07
TRAF3-208ENST00000560371 FAM49AQ9H0Q0 323 aaPredicted RBP14.64□□□□□ -0.07
TRAF3-208ENST00000560371 SLC38A10Q9HBR0 1119 aa14.64□□□□□ -0.07
TRAF3-208ENST00000560371 GLI2P10070 1586 aa14.64□□□□□ -0.07
TRAF3-208ENST00000560371 RPAP1Q9BWH6 1393 aaPredicted RBP14.64□□□□□ -0.07
TRAF3-208ENST00000560371 MED7O43513 233 aa14.64□□□□□ -0.07
TRAF3-208ENST00000560371 ANKRD20A3Q5VUR7 823 aa14.64□□□□□ -0.07
TRAF3-208ENST00000560371 VSIG1Q86XK7 387 aa14.64□□□□□ -0.07
TRAF3-208ENST00000560371 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.64□□□□□ -0.07
TRAF3-208ENST00000560371 ARHGEF2Q92974 986 aaKnown RBP14.64□□□□□ -0.07
TRAF3-208ENST00000560371 DESI2Q9BSY9 194 aa14.64□□□□□ -0.07
TRAF3-208ENST00000560371 POLR3EQ9NVU0 708 aa14.64□□□□□ -0.07
TRAF3-208ENST00000560371 EPN1Q9Y6I3 576 aaPredicted RBP14.64□□□□□ -0.07
TRAF3-208ENST00000560371 SAT1P21673 171 aa14.64□□□□□ -0.07
TRAF3-208ENST00000560371 MESDQ14696 234 aa14.64□□□□□ -0.07
TRAF3-208ENST00000560371 ZBTB33Q86T24 672 aa14.64□□□□□ -0.07
TRAF3-208ENST00000560371 CLTCQ00610 1675 aaKnown RBP14.64□□□□□ -0.07
TRAF3-208ENST00000560371 AFPP02771 609 aaKnown RBP14.64□□□□□ -0.07
TRAF3-208ENST00000560371 H7C1W4 665 aa14.64□□□□□ -0.07
TRAF3-208ENST00000560371 COPB1P53618 953 aaKnown RBP14.64□□□□□ -0.07
TRAF3-208ENST00000560371 EN1Q05925 392 aaPredicted RBP14.64□□□□□ -0.07
TRAF3-208ENST00000560371 RNF139Q8WU17 664 aa14.64□□□□□ -0.07
TRAF3-208ENST00000560371 FBXO40Q9UH90 709 aa14.64□□□□□ -0.07
TRAF3-208ENST00000560371 HYOU1Q9Y4L1 999 aa14.64□□□□□ -0.07
TRAF3-208ENST00000560371 MAD1L1Q9Y6D9 718 aa14.64□□□□□ -0.07
TRAF3-208ENST00000560371 MYL1P05976 194 aa14.63□□□□□ -0.07
TRAF3-208ENST00000560371 PPFIA1Q13136 1202 aa14.63□□□□□ -0.07
TRAF3-208ENST00000560371 SURF1Q15526 300 aa14.63□□□□□ -0.07
TRAF3-208ENST00000560371 NSUN7Q8NE18 718 aaKnown RBP14.63□□□□□ -0.07
TRAF3-208ENST00000560371 HOXD10P28358 340 aa14.63□□□□□ -0.07
TRAF3-208ENST00000560371 PRDX5P30044 214 aa14.63□□□□□ -0.07
TRAF3-208ENST00000560371 SCYL1Q96KG9 808 aa14.63□□□□□ -0.07
TRAF3-208ENST00000560371 PRPF3O43395 683 aaKnown RBP14.63□□□□□ -0.07
TRAF3-208ENST00000560371 TRIM11Q96F44 468 aa14.63□□□□□ -0.07
TRAF3-208ENST00000560371 SASH1O94885 1247 aa14.63□□□□□ -0.07
TRAF3-208ENST00000560371 ATP8B3O60423 1300 aa14.63□□□□□ -0.07
TRAF3-208ENST00000560371 SNAP25P60880 206 aa14.63□□□□□ -0.07
TRAF3-208ENST00000560371 MGARPQ8TDB4 240 aa14.63□□□□□ -0.07
TRAF3-208ENST00000560371 A0A1W2PQ27 194 aa14.63□□□□□ -0.07
TRAF3-208ENST00000560371 A0A1W2PQ64 194 aa14.63□□□□□ -0.07
TRAF3-208ENST00000560371 A0A1W2PQD8 194 aa14.63□□□□□ -0.07
TRAF3-208ENST00000560371 PLA2G4BP0C869 781 aa14.63□□□□□ -0.07
TRAF3-208ENST00000560371 TCP1P17987 556 aaKnown RBP14.63□□□□□ -0.07
TRAF3-208ENST00000560371 LRRC41Q15345 812 aa14.63□□□□□ -0.07
TRAF3-208ENST00000560371 ARHGAP24Q8N264 748 aa14.63□□□□□ -0.07
TRAF3-208ENST00000560371 SLITRK6Q9H5Y7 841 aa14.63□□□□□ -0.07
TRAF3-208ENST00000560371 PIH1D3Q9NQM4 214 aaKnown RBP14.63□□□□□ -0.07
TRAF3-208ENST00000560371 PRDM15P57071 1507 aaPredicted RBP14.62□□□□□ -0.07
TRAF3-208ENST00000560371 USP17L5A8MUK1 530 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 U2AF2P26368 475 aaKnown RBP eCLIP14.62□□□□□ -0.07
TRAF3-208ENST00000560371 CACNB1Q02641 598 aaPredicted RBP14.62□□□□□ -0.07
TRAF3-208ENST00000560371 STXBP2Q15833 593 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 TMED8Q6PL24 325 aaPredicted RBP14.62□□□□□ -0.07
TRAF3-208ENST00000560371 GCNT4Q9P109 453 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 PTCH1Q13635 1447 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 TNS3Q68CZ2 1445 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 MTMR1Q13613 665 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 TSTA3Q13630 321 aaPredicted RBP14.62□□□□□ -0.07
TRAF3-208ENST00000560371 ARMCX2Q7L311 632 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 DGKHQ86XP1 1220 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 DCAF4Q8WV16 495 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 P2RX5Q93086 422 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 CDC25AP30304 524 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 GUCY2FP51841 1108 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 SEPT2Q15019 361 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 AXIN2Q9Y2T1 843 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 USP17L10C9JJH3 530 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 MYL3P08590 195 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 EEF1GP26641 437 aaKnown RBP14.62□□□□□ -0.07
TRAF3-208ENST00000560371 DDIT3P35638 169 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 LMNB2Q03252 620 aa14.62□□□□□ -0.07
TRAF3-208ENST00000560371 FAM83BQ5T0W9 1011 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms