RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 EAF2Q96CJ1 260 aaPredicted RBP6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 C8orf76Q96K31 380 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 BTBD6Q96KE9 485 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 NBPF4Q96M43 638 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 TCEANC2Q96MN5 208 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 GMLQ99445 158 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 CARD10Q9BWT7 1032 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 FTOQ9C0B1 505 aaKnown RBP eCLIP6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 EPC1Q9H2F5 836 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 PHAXQ9H814 394 aaKnown RBP6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 MRPL44Q9H9J2 332 aaKnown RBP6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 GPAMQ9HCL2 828 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 COPRSQ9NQ92 184 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 GNL3LQ9NVN8 582 aaKnown RBP6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 MIS18AQ9NYP9 233 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 DBF4Q9UBU7 674 aaPredicted RBP6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 GGA1Q9UJY5 639 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 HPCAL4Q9UM19 191 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 CLIC4Q9Y696 253 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 FAM169AQ9Y6X4 670 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 HEG1Q9ULI3 1381 aa6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 ARID1BQ8NFD5 2236 aaPredicted RBP6.68□□□□□ -1.34
SNRPA1-209ENST00000560307 NWD2Q9ULI1 1742 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 A0A1W2PNR3 127 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 PI4KAP2A4QPH2 592 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 ANKRD62A6NC57 917 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 PPP1R12AO14974 1030 aaPredicted RBP6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 EIF3HO15372 352 aaKnown RBP eCLIP6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 OPA1O60313 960 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 MFAP3LO75121 409 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 DDX58O95786 925 aaKnown RBP6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 FDPSP14324 419 aaKnown RBP6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 CES1P23141 567 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 GPTP24298 496 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 MSX1P28360 303 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 TDO2P48775 406 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 ST13P50502 369 aaKnown RBP6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 MNAT1P51948 309 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 KIF23Q02241 960 aaPredicted RBP6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 PREPLQ4J6C6 727 aaPredicted RBP6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 FILIP1LQ4L180 1135 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 ZNF569Q5MCW4 686 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 EMC10Q5UCC4 262 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 KSR2Q6VAB6 950 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 SLCO4C1Q6ZQN7 724 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 ZNF572Q7Z3I7 529 aaPredicted RBP6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 PPFIBP1Q86W92 1011 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 PI4KAP1Q8N8J0 262 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 GPATCH11Q8N954 259 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 IGSF22Q8N9C0 903 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 KBTBD3Q8NAB2 608 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 C3orf20Q8ND61 904 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 C1orf131Q8NDD1 294 aaKnown RBP6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 GIMAP7Q8NHV1 300 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 DDX54Q8TDD1 881 aaKnown RBP6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 ARMC5Q96C12 935 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 GPRASP2Q96D09 838 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 HAUS7Q99871 368 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 CRACR2AQ9BSW2 395 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 EHD4Q9H223 541 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 TOMM22Q9NS69 142 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 FANCLQ9NW38 375 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 ABI2Q9NYB9 513 aaPredicted RBP6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 C9orf78Q9NZ63 289 aaPredicted RBP6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 CNTN3Q9P232 1028 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 MYO6Q9UM54 1294 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 SUFUQ9UMX1 484 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 TAF6LQ9Y6J9 622 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 MROH7-TTC4A0A0A0MT08 1334 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 ACEP12821 1306 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 LTN1O94822 1766 aa6.67□□□□□ -1.34
SNRPA1-209ENST00000560307 AFDNP55196 1824 aaKnown RBP6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 MYH7P12883 1935 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 KIF1AQ12756 1690 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 A0A087WWV3 80 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 ANO9A1A5B4 782 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 MINDY4BA8MYZ0 360 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 GRM8O00222 908 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 PSMD14O00487 310 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 BIN1O00499 593 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 N4BP1O75113 896 aaKnown RBP6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 CDKL5O76039 1030 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 KIAA0754O94854 1291 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 BMP4P12644 408 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 TNFRSF8P28908 595 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 GSTT1P30711 240 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 RDXP35241 583 aaKnown RBP6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 PIP4K2AP48426 406 aaPredicted RBP6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 FNTAP49354 379 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 SARSP49591 514 aaKnown RBP6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 PLCD1P51178 756 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 IRAK1P51617 712 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 IRX1P78414 480 aaPredicted RBP6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 SPAG1Q07617 926 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 FZD5Q13467 585 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 COL9A3Q14050 684 aaPredicted RBP6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 MORC3Q14149 939 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 GRM2Q14416 872 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 CRYMQ14894 314 aa6.66□□□□□ -1.34
SNRPA1-209ENST00000560307 SART3Q15020 963 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms