RNA–Protein interactions for RNA: ENST00000560253.1

MEIS3-208, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,060 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-208ENST00000560253 SPATA33Q96N06 139 aa17.13■□□□□ 0.33
MEIS3-208ENST00000560253 ALDH8A1Q9H2A2 487 aaPredicted RBP17.13■□□□□ 0.33
MEIS3-208ENST00000560253 HIPK3Q9H422 1215 aa17.13■□□□□ 0.33
MEIS3-208ENST00000560253 ZSWIM6Q9HCJ5 1215 aa17.13■□□□□ 0.33
MEIS3-208ENST00000560253 TBX21Q9UL17 535 aa17.13■□□□□ 0.33
MEIS3-208ENST00000560253 SPTBN5Q9NRC6 3674 aaKnown RBP17.12■□□□□ 0.33
MEIS3-208ENST00000560253 NOP56O00567 594 aaKnown RBP17.12■□□□□ 0.33
MEIS3-208ENST00000560253 GGPS1O95749 300 aa17.12■□□□□ 0.33
MEIS3-208ENST00000560253 ADD1P35611 737 aaKnown RBP17.12■□□□□ 0.33
MEIS3-208ENST00000560253 ADCY7P51828 1080 aa17.12■□□□□ 0.33
MEIS3-208ENST00000560253 GPKOWQ92917 476 aaPredicted RBP eCLIP17.12■□□□□ 0.33
MEIS3-208ENST00000560253 INPP4AQ96PE3 977 aaPredicted RBP17.12■□□□□ 0.33
MEIS3-208ENST00000560253 AGXT2Q9BYV1 514 aa17.12■□□□□ 0.33
MEIS3-208ENST00000560253 PPP1R12CQ9BZL4 782 aa17.12■□□□□ 0.33
MEIS3-208ENST00000560253 RTEL1Q9NZ71 1219 aa17.12■□□□□ 0.33
MEIS3-208ENST00000560253 CNTNAP5Q8WYK1 1306 aa17.12■□□□□ 0.33
MEIS3-208ENST00000560253 SMCO2A6NFE2 343 aa17.11■□□□□ 0.33
MEIS3-208ENST00000560253 CPLX1O14810 134 aa17.11■□□□□ 0.33
MEIS3-208ENST00000560253 MAFGO15525 162 aa17.11■□□□□ 0.33
MEIS3-208ENST00000560253 CDC27P30260 824 aa17.11■□□□□ 0.33
MEIS3-208ENST00000560253 ICAM3P32942 547 aa17.11■□□□□ 0.33
MEIS3-208ENST00000560253 MYSM1Q5VVJ2 828 aa17.11■□□□□ 0.33
MEIS3-208ENST00000560253 RPUSD2Q8IZ73 545 aaKnown RBP17.11■□□□□ 0.33
MEIS3-208ENST00000560253 CCDC155Q8N6L0 562 aa17.11■□□□□ 0.33
MEIS3-208ENST00000560253 RETREG2Q8NC44 543 aa17.11■□□□□ 0.33
MEIS3-208ENST00000560253 IL31RAQ8NI17 732 aa17.11■□□□□ 0.33
MEIS3-208ENST00000560253 TRPV6Q9H1D0 765 aa17.11■□□□□ 0.33
MEIS3-208ENST00000560253 MTIF3Q9H2K0 278 aaKnown RBP17.11■□□□□ 0.33
MEIS3-208ENST00000560253 RIC8AQ9NPQ8 531 aa17.11■□□□□ 0.33
MEIS3-208ENST00000560253 BARHL2Q9NY43 387 aa17.11■□□□□ 0.33
MEIS3-208ENST00000560253 PCDHA6Q9UN73 950 aa17.11■□□□□ 0.33
MEIS3-208ENST00000560253 PCDHA8Q9Y5H6 950 aa17.11■□□□□ 0.33
MEIS3-208ENST00000560253 FRMPD4Q14CM0 1322 aa17.11■□□□□ 0.33
MEIS3-208ENST00000560253 KIAA1217Q5T5P2 1943 aa17.11■□□□□ 0.33
MEIS3-208ENST00000560253 SPATA31C2B4DYI2 1134 aa17.1■□□□□ 0.33
MEIS3-208ENST00000560253 PRPF3O43395 683 aaKnown RBP17.1■□□□□ 0.33
MEIS3-208ENST00000560253 B4GALT4O60513 344 aa17.1■□□□□ 0.33
MEIS3-208ENST00000560253 RGS20O76081 388 aa17.1■□□□□ 0.33
MEIS3-208ENST00000560253 SCG2P13521 617 aa17.1■□□□□ 0.33
MEIS3-208ENST00000560253 ANAPC15P60006 121 aa17.1■□□□□ 0.33
MEIS3-208ENST00000560253 SHHQ15465 462 aa17.1■□□□□ 0.33
MEIS3-208ENST00000560253 WWC2Q6AWC2 1192 aa17.1■□□□□ 0.33
MEIS3-208ENST00000560253 TRIM22Q8IYM9 498 aa17.1■□□□□ 0.33
MEIS3-208ENST00000560253 C7orf31Q8N865 590 aa17.1■□□□□ 0.33
MEIS3-208ENST00000560253 GPRASP2Q96D09 838 aa17.1■□□□□ 0.33
MEIS3-208ENST00000560253 ZNF274Q96GC6 653 aaPredicted RBP17.1■□□□□ 0.33
MEIS3-208ENST00000560253 SENP7Q9BQF6 1050 aa17.1■□□□□ 0.33
MEIS3-208ENST00000560253 C6orf50Q9HD87 102 aa17.1■□□□□ 0.33
MEIS3-208ENST00000560253 PDRG1Q9NUG6 133 aa17.1■□□□□ 0.33
MEIS3-208ENST00000560253 GRIN2DO15399 1336 aa17.1■□□□□ 0.33
MEIS3-208ENST00000560253 UBA1P22314 1058 aaKnown RBP17.09■□□□□ 0.33
MEIS3-208ENST00000560253 ITGB8P26012 769 aa17.09■□□□□ 0.33
MEIS3-208ENST00000560253 GNA11P29992 359 aa17.09■□□□□ 0.33
MEIS3-208ENST00000560253 MRPS9P82933 396 aaKnown RBP17.09■□□□□ 0.33
MEIS3-208ENST00000560253 FUT2Q10981 343 aa17.09■□□□□ 0.33
MEIS3-208ENST00000560253 AP3B2Q13367 1082 aa17.09■□□□□ 0.33
MEIS3-208ENST00000560253 BFSP2Q13515 415 aa17.09■□□□□ 0.33
MEIS3-208ENST00000560253 UBE2SQ16763 222 aa17.09■□□□□ 0.33
MEIS3-208ENST00000560253 PFKFB3Q16875 520 aaPredicted RBP17.09■□□□□ 0.33
MEIS3-208ENST00000560253 PSRC1Q6PGN9 363 aaPredicted RBP17.09■□□□□ 0.33
MEIS3-208ENST00000560253 BICD2Q8TD16 824 aa17.09■□□□□ 0.33
MEIS3-208ENST00000560253 ZFP91Q96JP5 570 aaPredicted RBP17.09■□□□□ 0.33
MEIS3-208ENST00000560253 RNPC3Q96LT9 517 aaKnown RBP17.09■□□□□ 0.33
MEIS3-208ENST00000560253 RNF26Q9BY78 433 aaPredicted RBP17.09■□□□□ 0.33
MEIS3-208ENST00000560253 FAM217BQ9NTX9 383 aaPredicted RBP17.09■□□□□ 0.33
MEIS3-208ENST00000560253 PDIA3P30101 505 aaKnown RBP17.08■□□□□ 0.32
MEIS3-208ENST00000560253 CYP2C18P33260 490 aa17.08■□□□□ 0.32
MEIS3-208ENST00000560253 ZNF76P36508 570 aa17.08■□□□□ 0.32
MEIS3-208ENST00000560253 PSEN2P49810 448 aa17.08■□□□□ 0.32
MEIS3-208ENST00000560253 EVCP57679 992 aa17.08■□□□□ 0.32
MEIS3-208ENST00000560253 CCT2P78371 535 aaKnown RBP17.08■□□□□ 0.32
MEIS3-208ENST00000560253 ANKRD1Q15327 319 aa17.08■□□□□ 0.32
MEIS3-208ENST00000560253 METTL7BQ6UX53 244 aa17.08■□□□□ 0.32
MEIS3-208ENST00000560253 CYFIP1Q7L576 1253 aa17.08■□□□□ 0.32
MEIS3-208ENST00000560253 CCDC148Q8NFR7 591 aa17.08■□□□□ 0.32
MEIS3-208ENST00000560253 ALG1Q9BT22 464 aa17.08■□□□□ 0.32
MEIS3-208ENST00000560253 STXBP3O00186 592 aa17.07■□□□□ 0.32
MEIS3-208ENST00000560253 SORBS3O60504 671 aa17.07■□□□□ 0.32
MEIS3-208ENST00000560253 CSF2RAP15509 400 aa17.07■□□□□ 0.32
MEIS3-208ENST00000560253 IFNAR1P17181 557 aa17.07■□□□□ 0.32
MEIS3-208ENST00000560253 SP2Q02086 613 aa17.07■□□□□ 0.32
MEIS3-208ENST00000560253 SSRP1Q08945 709 aaKnown RBP17.07■□□□□ 0.32
MEIS3-208ENST00000560253 MTMR1Q13613 665 aa17.07■□□□□ 0.32
MEIS3-208ENST00000560253 MFSD10Q14728 455 aa17.07■□□□□ 0.32
MEIS3-208ENST00000560253 PTGISQ16647 500 aa17.07■□□□□ 0.32
MEIS3-208ENST00000560253 KIAA0753Q2KHM9 967 aa17.07■□□□□ 0.32
MEIS3-208ENST00000560253 HSDL1Q3SXM5 330 aa17.07■□□□□ 0.32
MEIS3-208ENST00000560253 SESTD1Q86VW0 696 aa17.07■□□□□ 0.32
MEIS3-208ENST00000560253 NOC4LQ9BVI4 516 aaKnown RBP17.07■□□□□ 0.32
MEIS3-208ENST00000560253 UPF3BQ9BZI7 483 aaKnown RBP17.07■□□□□ 0.32
MEIS3-208ENST00000560253 IL23AQ9NPF7 189 aa17.07■□□□□ 0.32
MEIS3-208ENST00000560253 TRMT13Q9NUP7 481 aaKnown RBP17.07■□□□□ 0.32
MEIS3-208ENST00000560253 ZNF215Q9UL58 517 aaPredicted RBP17.07■□□□□ 0.32
MEIS3-208ENST00000560253 NID2Q14112 1375 aa17.06■□□□□ 0.32
MEIS3-208ENST00000560253 ESYT2A0FGR8 921 aa17.06■□□□□ 0.32
MEIS3-208ENST00000560253 FGBP02675 491 aa17.06■□□□□ 0.32
MEIS3-208ENST00000560253 PFKMP08237 780 aa17.06■□□□□ 0.32
MEIS3-208ENST00000560253 CCL23P55773 120 aa17.06■□□□□ 0.32
MEIS3-208ENST00000560253 C9orf50Q5SZB4 431 aa17.06■□□□□ 0.32
MEIS3-208ENST00000560253 SLC26A6Q9BXS9 759 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms