RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 NEK8Q86SG6 692 aa13.71□□□□□ -0.21
RABGGTA-215ENST00000560207 TBCKQ8TEA7 893 aa13.71□□□□□ -0.21
RABGGTA-215ENST00000560207 AIFM3Q96NN9 605 aa13.71□□□□□ -0.21
RABGGTA-215ENST00000560207 TBC1D22BQ9NU19 505 aa13.71□□□□□ -0.21
RABGGTA-215ENST00000560207 TCEAL9Q9UHQ7 104 aa13.71□□□□□ -0.21
RABGGTA-215ENST00000560207 NOL7Q9UMY1 257 aaKnown RBP13.71□□□□□ -0.21
RABGGTA-215ENST00000560207 SMPD1P17405 629 aa13.7□□□□□ -0.22
RABGGTA-215ENST00000560207 U2AF2P26368 475 aaKnown RBP eCLIP13.7□□□□□ -0.22
RABGGTA-215ENST00000560207 TLK2Q86UE8 772 aa13.7□□□□□ -0.22
RABGGTA-215ENST00000560207 DHX37Q8IY37 1157 aaKnown RBP13.7□□□□□ -0.22
RABGGTA-215ENST00000560207 POLR3EQ9NVU0 708 aa13.7□□□□□ -0.22
RABGGTA-215ENST00000560207 TMEM260Q9NX78 707 aa13.7□□□□□ -0.22
RABGGTA-215ENST00000560207 HTTP42858 3142 aa13.7□□□□□ -0.22
RABGGTA-215ENST00000560207 NFASCO94856 1347 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 MYH9P35579 1960 aaKnown RBP13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 A6NJR5 290 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 BTBD18B2RXH4 712 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 TBX3O15119 743 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 PPFIA4O75335 1185 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 RGS20O76081 388 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 C6orf222P0C671 652 aaPredicted RBP13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 ITGB5P18084 799 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 Q4G0T1 1027 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 GNASQ5JWF2 1037 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 METTL7BQ6UX53 244 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 NECAB2Q7Z6G3 386 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 NOSTRINQ8IVI9 506 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 KLHDC9Q8NEP7 349 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 IL31RAQ8NI17 732 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 TNPO1Q92973 898 aaKnown RBP13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 SDF4Q9BRK5 362 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 MLXIPQ9HAP2 919 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 PDGFCQ9NRA1 345 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 KCNH7Q9NS40 1196 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 RTEL1Q9NZ71 1219 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 KAT6AQ92794 2004 aa13.69□□□□□ -0.22
RABGGTA-215ENST00000560207 SYNRGQ9UMZ2 1314 aa13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 DYNC1LI2O43237 492 aaPredicted RBP13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 ADAMTS4O75173 837 aa13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 BAG4O95429 457 aaKnown RBP13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 MYCP01106 439 aaPredicted RBP13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 LRRC41Q15345 812 aa13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 FSCN1Q16658 493 aaKnown RBP13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 RILPL1Q5EBL4 403 aa13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 CELF3Q5SZQ8 465 aaKnown RBP13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 MYSM1Q5VVJ2 828 aa13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 PIK3AP1Q6ZUJ8 805 aa13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 BRAPQ7Z569 592 aa13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 PLA2G4DQ86XP0 818 aa13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 OR6J1Q8NGC5 347 aa13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 PPTC7Q8NI37 304 aa13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 TNFRSF25Q93038 417 aa13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 SHISA4Q96DD7 197 aa13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 FAM20AQ96MK3 541 aa13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 MBOAT7Q96N66 472 aa13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 RIT2Q99578 217 aa13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 WDR81Q562E7 1941 aa13.68□□□□□ -0.22
RABGGTA-215ENST00000560207 DOCK5Q9H7D0 1870 aa13.67□□□□□ -0.22
RABGGTA-215ENST00000560207 ELP1O95163 1332 aa13.67□□□□□ -0.22
RABGGTA-215ENST00000560207 IGLV3-22A0A075B6J6 115 aa13.67□□□□□ -0.22
RABGGTA-215ENST00000560207 NOP56O00567 594 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-215ENST00000560207 FARP2O94887 1054 aaPredicted RBP13.67□□□□□ -0.22
RABGGTA-215ENST00000560207 GGPS1O95749 300 aa13.67□□□□□ -0.22
RABGGTA-215ENST00000560207 DGKDQ16760 1214 aa13.67□□□□□ -0.22
RABGGTA-215ENST00000560207 INF2Q27J81 1249 aa13.67□□□□□ -0.22
RABGGTA-215ENST00000560207 SLFN12Q8IYM2 578 aa13.67□□□□□ -0.22
RABGGTA-215ENST00000560207 RASGRP4Q8TDF6 673 aa13.67□□□□□ -0.22
RABGGTA-215ENST00000560207 GLT1D1Q96MS3 346 aa13.67□□□□□ -0.22
RABGGTA-215ENST00000560207 HTATIP2Q9BUP3 242 aa13.67□□□□□ -0.22
RABGGTA-215ENST00000560207 KATNAL1Q9BW62 490 aa13.67□□□□□ -0.22
RABGGTA-215ENST00000560207 ZSCAN16Q9H4T2 348 aaPredicted RBP13.67□□□□□ -0.22
RABGGTA-215ENST00000560207 DAXXQ9UER7 740 aaPredicted RBP13.67□□□□□ -0.22
RABGGTA-215ENST00000560207 PHF24Q9UPV7 400 aa13.67□□□□□ -0.22
RABGGTA-215ENST00000560207 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 FAM86B1E9PN63 330 aa13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 IPO5O00410 1097 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 LAD1O00515 517 aa13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 FAM86B2P0C5J1 330 aa13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 HOXD8P13378 290 aaPredicted RBP13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 UBA1P22314 1058 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 ANP32AP39687 249 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 KRT76Q01546 638 aa13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 ARHGAP1Q07960 439 aa13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 NR5A1Q13285 461 aa13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 LY6KQ17RY6 165 aa13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 LETM2Q2VYF4 491 aa13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 SMAP1Q8IYB5 467 aaPredicted RBP13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 RDM1Q8NG50 284 aa13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 OXER1Q8TDS5 423 aa13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 PGBD1Q96JS3 809 aa13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 SPATA33Q96N06 139 aa13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 ZNF577Q9BSK1 485 aa13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 AGO4Q9HCK5 861 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 GJB4Q9NTQ9 266 aa13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 DDX25Q9UHL0 483 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-215ENST00000560207 MROH7Q68CQ1 1323 aa13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 MARCH6O60337 910 aa13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 CCNT1O60563 726 aaKnown RBP13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 BMP15O95972 392 aa13.65□□□□□ -0.22
RABGGTA-215ENST00000560207 PGK1P00558 417 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms