RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 MRPL12P52815 198 aaKnown RBP23.78■■□□□ 1.4
PSEN1-225ENST00000560005 CSPP1Q1MSJ5 1256 aa23.78■■□□□ 1.4
PSEN1-225ENST00000560005 CHST3Q7LGC8 479 aa23.78■■□□□ 1.4
PSEN1-225ENST00000560005 C17orf80Q9BSJ5 609 aa23.78■■□□□ 1.4
PSEN1-225ENST00000560005 ANAPC4Q9UJX5 808 aa23.78■■□□□ 1.4
PSEN1-225ENST00000560005 PNMA2Q9UL42 364 aa23.78■■□□□ 1.4
PSEN1-225ENST00000560005 GRXCR2A6NFK2 248 aa23.77■■□□□ 1.4
PSEN1-225ENST00000560005 ORC4O43929 436 aa23.77■■□□□ 1.4
PSEN1-225ENST00000560005 EFCAB14O75071 495 aa23.77■■□□□ 1.4
PSEN1-225ENST00000560005 GH1P01241 217 aa23.77■■□□□ 1.4
PSEN1-225ENST00000560005 ARHGAP1Q07960 439 aa23.77■■□□□ 1.4
PSEN1-225ENST00000560005 IKBKEQ14164 716 aa23.77■■□□□ 1.4
PSEN1-225ENST00000560005 LY6KQ17RY6 165 aa23.77■■□□□ 1.4
PSEN1-225ENST00000560005 FBXO22Q8NEZ5 403 aa23.77■■□□□ 1.4
PSEN1-225ENST00000560005 TOMM22Q9NS69 142 aa23.77■■□□□ 1.4
PSEN1-225ENST00000560005 GTF2IRD1Q9UHL9 959 aa23.77■■□□□ 1.4
PSEN1-225ENST00000560005 PDHBP11177 359 aa23.76■■□□□ 1.39
PSEN1-225ENST00000560005 CASTP20810 708 aaKnown RBP23.76■■□□□ 1.39
PSEN1-225ENST00000560005 MRE11P49959 708 aa23.76■■□□□ 1.39
PSEN1-225ENST00000560005 ALX1Q15699 326 aa23.76■■□□□ 1.39
PSEN1-225ENST00000560005 SEPT14Q6ZU15 432 aa23.76■■□□□ 1.39
PSEN1-225ENST00000560005 C7orf31Q8N865 590 aa23.76■■□□□ 1.39
PSEN1-225ENST00000560005 HDAC6Q9UBN7 1215 aa23.76■■□□□ 1.39
PSEN1-225ENST00000560005 WDR19Q8NEZ3 1342 aa23.76■■□□□ 1.39
PSEN1-225ENST00000560005 USH1GQ495M9 461 aa23.75■■□□□ 1.39
PSEN1-225ENST00000560005 RRP12Q5JTH9 1297 aaKnown RBP23.75■■□□□ 1.39
PSEN1-225ENST00000560005 VPS53Q5VIR6 699 aa23.75■■□□□ 1.39
PSEN1-225ENST00000560005 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.75■■□□□ 1.39
PSEN1-225ENST00000560005 CYP46A1Q9Y6A2 500 aa23.75■■□□□ 1.39
PSEN1-225ENST00000560005 H3BQ06 376 aaPredicted RBP23.74■■□□□ 1.39
PSEN1-225ENST00000560005 K7ELQ4 463 aaPredicted RBP23.74■■□□□ 1.39
PSEN1-225ENST00000560005 HMGB1P09429 215 aaKnown RBP23.74■■□□□ 1.39
PSEN1-225ENST00000560005 FGRP09769 529 aa23.74■■□□□ 1.39
PSEN1-225ENST00000560005 ZNF543Q08ER8 600 aa23.74■■□□□ 1.39
PSEN1-225ENST00000560005 MBTPS1Q14703 1052 aa23.74■■□□□ 1.39
PSEN1-225ENST00000560005 IMMTQ16891 758 aaKnown RBP23.74■■□□□ 1.39
PSEN1-225ENST00000560005 TRAF7Q6Q0C0 670 aa23.74■■□□□ 1.39
PSEN1-225ENST00000560005 RASEFQ8IZ41 740 aa23.74■■□□□ 1.39
PSEN1-225ENST00000560005 NEK9Q8TD19 979 aa23.74■■□□□ 1.39
PSEN1-225ENST00000560005 WNT8BQ93098 351 aa23.74■■□□□ 1.39
PSEN1-225ENST00000560005 ALG1Q9BT22 464 aa23.74■■□□□ 1.39
PSEN1-225ENST00000560005 INSL6Q9Y581 213 aa23.74■■□□□ 1.39
PSEN1-225ENST00000560005 ZMYM6O95789 1325 aa23.74■■□□□ 1.39
PSEN1-225ENST00000560005 DCXO43602 365 aa23.73■■□□□ 1.39
PSEN1-225ENST00000560005 PSEN2P49810 448 aa23.73■■□□□ 1.39
PSEN1-225ENST00000560005 PTK7Q13308 1070 aa23.73■■□□□ 1.39
PSEN1-225ENST00000560005 DGKDQ16760 1214 aa23.73■■□□□ 1.39
PSEN1-225ENST00000560005 TRIM71Q2Q1W2 868 aaKnown RBP23.73■■□□□ 1.39
PSEN1-225ENST00000560005 PUS10Q3MIT2 529 aaKnown RBP23.73■■□□□ 1.39
PSEN1-225ENST00000560005 ZNF618Q5T7W0 954 aa23.73■■□□□ 1.39
PSEN1-225ENST00000560005 MRPL38Q96DV4 380 aaKnown RBP23.73■■□□□ 1.39
PSEN1-225ENST00000560005 ZSWIM6Q9HCJ5 1215 aa23.73■■□□□ 1.39
PSEN1-225ENST00000560005 LGR5O75473 907 aa23.72■■□□□ 1.39
PSEN1-225ENST00000560005 NHLH1Q02575 133 aa23.72■■□□□ 1.39
PSEN1-225ENST00000560005 RGS22Q8NE09 1264 aa23.72■■□□□ 1.39
PSEN1-225ENST00000560005 JAKMIP1Q96N16 626 aaKnown RBP23.72■■□□□ 1.39
PSEN1-225ENST00000560005 ZNF286BP0CG31 522 aa23.71■■□□□ 1.39
PSEN1-225ENST00000560005 MFSD10Q14728 455 aa23.71■■□□□ 1.39
PSEN1-225ENST00000560005 PTPROQ16827 1216 aa23.71■■□□□ 1.39
PSEN1-225ENST00000560005 BLOC1S2Q6QNY1 142 aa23.71■■□□□ 1.39
PSEN1-225ENST00000560005 MYOCDQ8IZQ8 938 aa23.71■■□□□ 1.39
PSEN1-225ENST00000560005 TBC1D5Q92609 795 aa23.71■■□□□ 1.39
PSEN1-225ENST00000560005 TAAR1Q96RJ0 339 aa23.71■■□□□ 1.39
PSEN1-225ENST00000560005 KATNAL1Q9BW62 490 aa23.71■■□□□ 1.39
PSEN1-225ENST00000560005 TCP11L1Q9NUJ3 509 aa23.71■■□□□ 1.39
PSEN1-225ENST00000560005 FGAP02671 866 aa23.7■■□□□ 1.38
PSEN1-225ENST00000560005 AMHP03971 560 aa23.7■■□□□ 1.38
PSEN1-225ENST00000560005 CYP21A2P08686 494 aa23.7■■□□□ 1.38
PSEN1-225ENST00000560005 HTRA4P83105 476 aaPredicted RBP23.7■■□□□ 1.38
PSEN1-225ENST00000560005 ZNF200P98182 395 aaPredicted RBP23.7■■□□□ 1.38
PSEN1-225ENST00000560005 ANKRD1Q15327 319 aa23.7■■□□□ 1.38
PSEN1-225ENST00000560005 KIAA0753Q2KHM9 967 aa23.7■■□□□ 1.38
PSEN1-225ENST00000560005 TIGD5Q53EQ6 642 aa23.7■■□□□ 1.38
PSEN1-225ENST00000560005 RUFY3Q7L099 469 aa23.7■■□□□ 1.38
PSEN1-225ENST00000560005 SYTL5Q8TDW5 730 aaPredicted RBP23.7■■□□□ 1.38
PSEN1-225ENST00000560005 NSUN6Q8TEA1 469 aaKnown RBP23.7■■□□□ 1.38
PSEN1-225ENST00000560005 FBXL18Q96ME1 805 aa23.7■■□□□ 1.38
PSEN1-225ENST00000560005 CPVLQ9H3G5 476 aa23.7■■□□□ 1.38
PSEN1-225ENST00000560005 COL20A1Q9P218 1284 aa23.7■■□□□ 1.38
PSEN1-225ENST00000560005 TRIOO75962 3097 aa23.7■■□□□ 1.38
PSEN1-225ENST00000560005 KIAA1217Q5T5P2 1943 aa23.69■■□□□ 1.38
PSEN1-225ENST00000560005 POTEB3A0JP26 581 aa23.69■■□□□ 1.38
PSEN1-225ENST00000560005 ZNF213O14771 459 aa23.69■■□□□ 1.38
PSEN1-225ENST00000560005 F2P00734 622 aa23.69■■□□□ 1.38
PSEN1-225ENST00000560005 GOLGA8HP0CJ92 632 aa23.69■■□□□ 1.38
PSEN1-225ENST00000560005 SNHG28P0DPA3 235 aa23.69■■□□□ 1.38
PSEN1-225ENST00000560005 STXBP2Q15833 593 aa23.69■■□□□ 1.38
PSEN1-225ENST00000560005 EPC2Q52LR7 807 aa23.69■■□□□ 1.38
PSEN1-225ENST00000560005 POTEBQ6S5H4 581 aa23.69■■□□□ 1.38
PSEN1-225ENST00000560005 EP400NLQ6ZTU2 488 aa23.69■■□□□ 1.38
PSEN1-225ENST00000560005 BANK1Q8NDB2 785 aa23.69■■□□□ 1.38
PSEN1-225ENST00000560005 DBF4BQ8NFT6 615 aa23.69■■□□□ 1.38
PSEN1-225ENST00000560005 SP7Q8TDD2 431 aaPredicted RBP23.69■■□□□ 1.38
PSEN1-225ENST00000560005 NEK1Q96PY6 1258 aa23.69■■□□□ 1.38
PSEN1-225ENST00000560005 DDX41Q9UJV9 622 aaKnown RBP23.69■■□□□ 1.38
PSEN1-225ENST00000560005 MICAL3Q7RTP6 2002 aa23.69■■□□□ 1.38
PSEN1-225ENST00000560005 C5orf42Q9H799 3197 aa23.68■■□□□ 1.38
PSEN1-225ENST00000560005 HAS3O00219 553 aa23.68■■□□□ 1.38
PSEN1-225ENST00000560005 HSP90AA1P07900 732 aaKnown RBP23.68■■□□□ 1.38
PSEN1-225ENST00000560005 ZP2Q05996 745 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms