RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 TRIM21P19474 475 aaKnown RBP8.99□□□□□ -0.97
SMAD3-212ENST00000559937 MARSP56192 900 aaKnown RBP8.99□□□□□ -0.97
SMAD3-212ENST00000559937 FAM193AP78312 1265 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 ARHGAP4P98171 946 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 GABPB1Q06547 395 aaPredicted RBP8.99□□□□□ -0.97
SMAD3-212ENST00000559937 TCP10Q12799 353 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 COASYQ13057 564 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 AOC3Q16853 763 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 VWA3BQ502W6 1294 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 ZNF569Q5MCW4 686 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 FAM26FQ5R3K3 315 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 MSL1Q68DK7 614 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 WDR59Q6PJI9 974 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 LRRC55Q6ZSA7 311 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 KCNK18Q7Z418 384 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 ZC3H3Q8IXZ2 948 aaKnown RBP8.99□□□□□ -0.97
SMAD3-212ENST00000559937 MYOCDQ8IZQ8 938 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 KRT222Q8N1A0 295 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 SLC35F6Q8N357 371 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 LRRN4CLQ8ND94 238 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 ACRBPQ8NEB7 543 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 PSMD1Q99460 953 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 NDST4Q9H3R1 872 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 ARHGEF10LQ9HCE6 1279 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 LZTFL1Q9NQ48 299 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 KCNQ5Q9NR82 932 aa8.99□□□□□ -0.97
SMAD3-212ENST00000559937 FRMD3A2A2Y4 597 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 SPDYE3A6NKU9 549 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 USP17L15C9J2P7 530 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 USP17L13C9JLJ4 530 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 USP17L11C9JVI0 530 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 USP17L18D6R9N7 530 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 USP17L22D6RA61 530 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 USP17L17D6RBQ6 530 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 USP17L19D6RCP7 530 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 USP17L20D6RJB6 530 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 PSMD14O00487 310 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 PES1O00541 588 aaKnown RBP8.98□□□□□ -0.97
SMAD3-212ENST00000559937 KRT86O43790 486 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 IPO7O95373 1038 aaKnown RBP8.98□□□□□ -0.97
SMAD3-212ENST00000559937 IDEP14735 1019 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 CLCN6P51797 869 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 CACNB3P54284 484 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 FKBP3Q00688 224 aaKnown RBP8.98□□□□□ -0.97
SMAD3-212ENST00000559937 USP17L24Q0WX57 530 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 EDRF1Q3B7T1 1238 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 RSBN1LQ6PCB5 846 aaPredicted RBP8.98□□□□□ -0.97
SMAD3-212ENST00000559937 USP17L6PQ6QN14 398 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 TMCO3Q6UWJ1 677 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 DYMQ7RTS9 669 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 CREBRFQ8IUR6 639 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 RTKN2Q8IZC4 609 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 TXLNBQ8N3L3 684 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 ETNPPLQ8TBG4 499 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 FAM151AQ8WW52 585 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 CHP1Q99653 195 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 NUDT12Q9BQG2 462 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 SLF1Q9BQI6 1058 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 TSGA10Q9BZW7 698 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 NUCKS1Q9H1E3 243 aaKnown RBP8.98□□□□□ -0.97
SMAD3-212ENST00000559937 TDRD3Q9H7E2 651 aaKnown RBP8.98□□□□□ -0.97
SMAD3-212ENST00000559937 EHMT1Q9H9B1 1298 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 PANK4Q9NVE7 773 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 HDAC9Q9UKV0 1011 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 PLAGL2Q9UPG8 496 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 SIK3Q9Y2K2 1263 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 TMX2Q9Y320 296 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 SMCHD1A6NHR9 2005 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 FER1L6Q2WGJ9 1857 aa8.98□□□□□ -0.97
SMAD3-212ENST00000559937 ANO9A1A5B4 782 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 SPDYE2BA6NHP3 402 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 RASSF10A6NK89 507 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 FAM196BA6NMK8 535 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 PPIP5K2O43314 1243 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 TBC1D12O60347 775 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 ZRANB2O95218 330 aaKnown RBP eCLIP8.97□□□□□ -0.97
SMAD3-212ENST00000559937 LCA5LO95447 670 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 GH2P01242 217 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 PLA2G4BP0C869 781 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 SPDYE6P0CI01 402 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 CYP11B2P19099 503 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 MUTP22033 750 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 RPA1P27694 616 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 CHRNA5P30532 468 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 CHMP4BP1P59074 171 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 HERVK_113P62684 666 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 AMPD2Q01433 879 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 SPIRE1Q08AE8 756 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 BRD3Q15059 726 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 KIF4BQ2VIQ3 1234 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 TEX35Q5T0J7 233 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 FAM160B2Q86V87 743 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 GPBP1Q86WP2 473 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 MTMR14Q8NCE2 650 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 MSANTD4Q8NCY6 345 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 RPGRIP1Q96KN7 1286 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 PURBQ96QR8 312 aaKnown RBP8.97□□□□□ -0.97
SMAD3-212ENST00000559937 GMLQ99445 158 aa8.97□□□□□ -0.97
SMAD3-212ENST00000559937 POLR3CQ9BUI4 534 aaPredicted RBP8.97□□□□□ -0.97
SMAD3-212ENST00000559937 SH2D4AQ9H788 454 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms