RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 NBPF20Q3BBV1 942 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 VSIG10LQ86VR7 867 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 SAMD3Q8N6K7 520 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 AFG1LQ8WV93 481 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 ZSCAN31Q96LW9 406 aaPredicted RBP10.47□□□□□ -0.73
IDH3A-217ENST00000559889 SPZ1Q9BXG8 430 aa10.47□□□□□ -0.73
IDH3A-217ENST00000559889 TTYH1Q9H313 450 aaPredicted RBP10.47□□□□□ -0.73
IDH3A-217ENST00000559889 KPNA6O60684 536 aa10.46□□□□□ -0.73
IDH3A-217ENST00000559889 MMP3P08254 477 aa10.46□□□□□ -0.73
IDH3A-217ENST00000559889 GJB2P29033 226 aa10.46□□□□□ -0.73
IDH3A-217ENST00000559889 LIFRP42702 1097 aa10.46□□□□□ -0.73
IDH3A-217ENST00000559889 PGM5Q15124 567 aa10.46□□□□□ -0.73
IDH3A-217ENST00000559889 BRDTQ58F21 947 aaPredicted RBP10.46□□□□□ -0.73
IDH3A-217ENST00000559889 EMID1Q96A84 441 aaPredicted RBP10.46□□□□□ -0.73
IDH3A-217ENST00000559889 TMEM87BQ96K49 555 aa10.46□□□□□ -0.73
IDH3A-217ENST00000559889 SH2B1Q9NRF2 756 aaPredicted RBP10.46□□□□□ -0.73
IDH3A-217ENST00000559889 SCN10AQ9Y5Y9 1956 aa10.46□□□□□ -0.73
IDH3A-217ENST00000559889 MYH6P13533 1939 aa10.46□□□□□ -0.73
IDH3A-217ENST00000559889 BAZ2BQ9UIF8 2168 aaKnown RBP10.46□□□□□ -0.74
IDH3A-217ENST00000559889 GCOM1H8Y6P7 765 aaPredicted RBP10.46□□□□□ -0.74
IDH3A-217ENST00000559889 PLEKHA8P1O95397 391 aa10.46□□□□□ -0.74
IDH3A-217ENST00000559889 GH1P01241 217 aa10.46□□□□□ -0.74
IDH3A-217ENST00000559889 POLR2MP0CAP2 368 aa10.46□□□□□ -0.74
IDH3A-217ENST00000559889 CYP2C9P11712 490 aa10.46□□□□□ -0.74
IDH3A-217ENST00000559889 SMARCA1P28370 1054 aa10.46□□□□□ -0.74
IDH3A-217ENST00000559889 CCL23P55773 120 aa10.46□□□□□ -0.74
IDH3A-217ENST00000559889 ANKRD1Q15327 319 aa10.46□□□□□ -0.74
IDH3A-217ENST00000559889 TPRNQ4KMQ1 711 aa10.46□□□□□ -0.74
IDH3A-217ENST00000559889 ZNF697Q5TEC3 545 aa10.46□□□□□ -0.74
IDH3A-217ENST00000559889 NFRKBQ6P4R8 1299 aa10.46□□□□□ -0.74
IDH3A-217ENST00000559889 ZNF365Q70YC5 407 aa10.46□□□□□ -0.74
IDH3A-217ENST00000559889 SRBD1Q8N5C6 995 aaKnown RBP10.46□□□□□ -0.74
IDH3A-217ENST00000559889 PIBF1Q8WXW3 757 aa10.46□□□□□ -0.74
IDH3A-217ENST00000559889 KAT2BQ92831 832 aa10.46□□□□□ -0.74
IDH3A-217ENST00000559889 LRRC2Q9BYS8 371 aa10.46□□□□□ -0.74
IDH3A-217ENST00000559889 SEMA6BQ9H3T3 888 aa10.46□□□□□ -0.74
IDH3A-217ENST00000559889 RXRAP19793 462 aa10.45□□□□□ -0.74
IDH3A-217ENST00000559889 TRAF1Q13077 416 aa10.45□□□□□ -0.74
IDH3A-217ENST00000559889 TSGA10IPQ3SY00 556 aa10.45□□□□□ -0.74
IDH3A-217ENST00000559889 CMTR1Q8N1G2 835 aaKnown RBP10.45□□□□□ -0.74
IDH3A-217ENST00000559889 TMTC2Q8N394 836 aa10.45□□□□□ -0.74
IDH3A-217ENST00000559889 CTCFLQ8NI51 663 aaPredicted RBP10.45□□□□□ -0.74
IDH3A-217ENST00000559889 CTAGE1Q96RT6 745 aa10.45□□□□□ -0.74
IDH3A-217ENST00000559889 IL23AQ9NPF7 189 aa10.45□□□□□ -0.74
IDH3A-217ENST00000559889 LMBRD1Q9NUN5 540 aa10.45□□□□□ -0.74
IDH3A-217ENST00000559889 FRMPD4Q14CM0 1322 aa10.45□□□□□ -0.74
IDH3A-217ENST00000559889 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.45□□□□□ -0.74
IDH3A-217ENST00000559889 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.45□□□□□ -0.74
IDH3A-217ENST00000559889 STX6O43752 255 aa10.45□□□□□ -0.74
IDH3A-217ENST00000559889 SUPT20HL2P0C7V6 817 aa10.45□□□□□ -0.74
IDH3A-217ENST00000559889 SYT1P21579 422 aa10.45□□□□□ -0.74
IDH3A-217ENST00000559889 KIF5BP33176 963 aa10.45□□□□□ -0.74
IDH3A-217ENST00000559889 SP2Q02086 613 aa10.45□□□□□ -0.74
IDH3A-217ENST00000559889 KLHL40Q2TBA0 621 aa10.45□□□□□ -0.74
IDH3A-217ENST00000559889 SGMS1Q86VZ5 419 aa10.45□□□□□ -0.74
IDH3A-217ENST00000559889 FCHSD1Q86WN1 690 aa10.45□□□□□ -0.74
IDH3A-217ENST00000559889 GPKOWQ92917 476 aaPredicted RBP eCLIP10.45□□□□□ -0.74
IDH3A-217ENST00000559889 ZFP91Q96JP5 570 aaPredicted RBP10.45□□□□□ -0.74
IDH3A-217ENST00000559889 CXXC1Q9P0U4 656 aaPredicted RBP10.45□□□□□ -0.74
IDH3A-217ENST00000559889 MRVI1Q9Y6F6 885 aa10.45□□□□□ -0.74
IDH3A-217ENST00000559889 KIAA1217Q5T5P2 1943 aa10.44□□□□□ -0.74
IDH3A-217ENST00000559889 MYCLP12524 364 aaPredicted RBP10.44□□□□□ -0.74
IDH3A-217ENST00000559889 MRPS9P82933 396 aaKnown RBP10.44□□□□□ -0.74
IDH3A-217ENST00000559889 EXOSC10Q01780 885 aaKnown RBP10.44□□□□□ -0.74
IDH3A-217ENST00000559889 TOB2Q14106 344 aaPredicted RBP10.44□□□□□ -0.74
IDH3A-217ENST00000559889 L1TD1Q5T7N2 865 aaKnown RBP10.44□□□□□ -0.74
IDH3A-217ENST00000559889 CAVIN1Q6NZI2 390 aaKnown RBP10.44□□□□□ -0.74
IDH3A-217ENST00000559889 PSRC1Q6PGN9 363 aaPredicted RBP10.44□□□□□ -0.74
IDH3A-217ENST00000559889 NFXL1Q6ZNB6 911 aa10.44□□□□□ -0.74
IDH3A-217ENST00000559889 Q6ZUG5 572 aa10.44□□□□□ -0.74
IDH3A-217ENST00000559889 PPTC7Q8NI37 304 aa10.44□□□□□ -0.74
IDH3A-217ENST00000559889 HERVK_113Q902F9 699 aa10.44□□□□□ -0.74
IDH3A-217ENST00000559889 SCLYQ96I15 445 aa10.44□□□□□ -0.74
IDH3A-217ENST00000559889 CDX2Q99626 313 aaPredicted RBP10.44□□□□□ -0.74
IDH3A-217ENST00000559889 GDPD2Q9HCC8 539 aa10.44□□□□□ -0.74
IDH3A-217ENST00000559889 BRPF3Q9ULD4 1205 aa10.44□□□□□ -0.74
IDH3A-217ENST00000559889 CCDC69A6NI79 296 aa10.44□□□□□ -0.74
IDH3A-217ENST00000559889 GRXCR1A8MXD5 290 aa10.44□□□□□ -0.74
IDH3A-217ENST00000559889 MEIS2O14770 477 aa10.44□□□□□ -0.74
IDH3A-217ENST00000559889 HOXD8P13378 290 aaPredicted RBP10.44□□□□□ -0.74
IDH3A-217ENST00000559889 DNAJB2P25686 324 aa10.44□□□□□ -0.74
IDH3A-217ENST00000559889 PTPN11Q06124 597 aaPredicted RBP10.44□□□□□ -0.74
IDH3A-217ENST00000559889 FAM47CQ5HY64 1035 aa10.44□□□□□ -0.74
IDH3A-217ENST00000559889 MYSM1Q5VVJ2 828 aa10.44□□□□□ -0.74
IDH3A-217ENST00000559889 RAB11FIP4Q86YS3 637 aa10.44□□□□□ -0.74
IDH3A-217ENST00000559889 RRP36Q96EU6 259 aaKnown RBP10.44□□□□□ -0.74
IDH3A-217ENST00000559889 LZTS2Q9BRK4 669 aa10.44□□□□□ -0.74
IDH3A-217ENST00000559889 NAP1L2Q9ULW6 460 aaPredicted RBP10.44□□□□□ -0.74
IDH3A-217ENST00000559889 VPS37CA5D8V6 355 aaPredicted RBP10.43□□□□□ -0.74
IDH3A-217ENST00000559889 PIK3CDO00329 1044 aa10.43□□□□□ -0.74
IDH3A-217ENST00000559889 GNAQP50148 359 aa10.43□□□□□ -0.74
IDH3A-217ENST00000559889 LAMC2Q13753 1193 aa10.43□□□□□ -0.74
IDH3A-217ENST00000559889 DGKDQ16760 1214 aa10.43□□□□□ -0.74
IDH3A-217ENST00000559889 HSDL1Q3SXM5 330 aa10.43□□□□□ -0.74
IDH3A-217ENST00000559889 CELF3Q5SZQ8 465 aaKnown RBP10.43□□□□□ -0.74
IDH3A-217ENST00000559889 USP17L6PQ6QN14 398 aa10.43□□□□□ -0.74
IDH3A-217ENST00000559889 SESTD1Q86VW0 696 aa10.43□□□□□ -0.74
IDH3A-217ENST00000559889 FANCBQ8NB91 859 aa10.43□□□□□ -0.74
IDH3A-217ENST00000559889 BRF1Q92994 677 aa10.43□□□□□ -0.74
IDH3A-217ENST00000559889 BCAS3Q9H6U6 928 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms