RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 SLC5A5Q92911 643 aa13.75□□□□□ -0.21
HERC1-205ENST00000559886 ANP32EQ9BTT0 268 aa13.75□□□□□ -0.21
HERC1-205ENST00000559886 WDR11Q9BZH6 1224 aa13.75□□□□□ -0.21
HERC1-205ENST00000559886 CCSER1Q9C0I3 900 aa13.75□□□□□ -0.21
HERC1-205ENST00000559886 GZF1Q9H116 711 aaPredicted RBP13.75□□□□□ -0.21
HERC1-205ENST00000559886 KCNH7Q9NS40 1196 aa13.75□□□□□ -0.21
HERC1-205ENST00000559886 PP2D1A8MPX8 630 aa13.75□□□□□ -0.21
HERC1-205ENST00000559886 EDNRBP24530 442 aa13.75□□□□□ -0.21
HERC1-205ENST00000559886 CDC25AP30304 524 aa13.75□□□□□ -0.21
HERC1-205ENST00000559886 GPR142Q7Z601 462 aa13.75□□□□□ -0.21
HERC1-205ENST00000559886 FGD4Q96M96 766 aa13.75□□□□□ -0.21
HERC1-205ENST00000559886 INPP4AQ96PE3 977 aaPredicted RBP13.75□□□□□ -0.21
HERC1-205ENST00000559886 UIMC1Q96RL1 719 aa13.75□□□□□ -0.21
HERC1-205ENST00000559886 CLSTN2Q9H4D0 955 aa13.75□□□□□ -0.21
HERC1-205ENST00000559886 LRWD1Q9UFC0 647 aa13.75□□□□□ -0.21
HERC1-205ENST00000559886 IVNS1ABPQ9Y6Y0 642 aa13.75□□□□□ -0.21
HERC1-205ENST00000559886 ZNF236Q9UL36 1845 aa13.75□□□□□ -0.21
HERC1-205ENST00000559886 TXLNAP40222 546 aa13.74□□□□□ -0.21
HERC1-205ENST00000559886 UBA7P41226 1012 aa13.74□□□□□ -0.21
HERC1-205ENST00000559886 SPIRE1Q08AE8 756 aa13.74□□□□□ -0.21
HERC1-205ENST00000559886 MTMR1Q13613 665 aa13.74□□□□□ -0.21
HERC1-205ENST00000559886 TIGD1Q96MW7 591 aa13.74□□□□□ -0.21
HERC1-205ENST00000559886 NUP62CLQ9H1M0 184 aa13.74□□□□□ -0.21
HERC1-205ENST00000559886 A0A087X0B3 334 aa13.74□□□□□ -0.21
HERC1-205ENST00000559886 LOC102724159A0A0B4J2E5 919 aa13.74□□□□□ -0.21
HERC1-205ENST00000559886 POTEMA6NI47 508 aa13.74□□□□□ -0.21
HERC1-205ENST00000559886 IPO5O00410 1097 aaKnown RBP13.74□□□□□ -0.21
HERC1-205ENST00000559886 POLR2DO15514 142 aaKnown RBP13.74□□□□□ -0.21
HERC1-205ENST00000559886 PSMD10O75832 226 aa13.74□□□□□ -0.21
HERC1-205ENST00000559886 ADORA2AP29274 412 aa13.74□□□□□ -0.21
HERC1-205ENST00000559886 PWP2Q15269 919 aaKnown RBP13.74□□□□□ -0.21
HERC1-205ENST00000559886 STXBP2Q15833 593 aa13.74□□□□□ -0.21
HERC1-205ENST00000559886 PLEKHH3Q7Z736 793 aa13.74□□□□□ -0.21
HERC1-205ENST00000559886 GPRASP2Q96D09 838 aa13.74□□□□□ -0.21
HERC1-205ENST00000559886 ZNF577Q9BSK1 485 aa13.74□□□□□ -0.21
HERC1-205ENST00000559886 MGAMO43451 1857 aa13.74□□□□□ -0.21
HERC1-205ENST00000559886 B4DLN1 442 aa13.73□□□□□ -0.21
HERC1-205ENST00000559886 MAFGO15525 162 aa13.73□□□□□ -0.21
HERC1-205ENST00000559886 EIF3JO75822 258 aaKnown RBP13.73□□□□□ -0.21
HERC1-205ENST00000559886 RGS20O76081 388 aa13.73□□□□□ -0.21
HERC1-205ENST00000559886 GRB14Q14449 540 aa13.73□□□□□ -0.21
HERC1-205ENST00000559886 ZSCAN23Q3MJ62 389 aa13.73□□□□□ -0.21
HERC1-205ENST00000559886 NLRX1Q86UT6 975 aa13.73□□□□□ -0.21
HERC1-205ENST00000559886 PDILTQ8N807 584 aa13.73□□□□□ -0.21
HERC1-205ENST00000559886 RIT2Q99578 217 aa13.73□□□□□ -0.21
HERC1-205ENST00000559886 MMTAG2Q9BU76 263 aaKnown RBP13.73□□□□□ -0.21
HERC1-205ENST00000559886 PANK2Q9BZ23 570 aa13.73□□□□□ -0.21
HERC1-205ENST00000559886 AGO4Q9HCK5 861 aaKnown RBP13.73□□□□□ -0.21
HERC1-205ENST00000559886 VAV3Q9UKW4 847 aa13.73□□□□□ -0.21
HERC1-205ENST00000559886 ZNF792Q3KQV3 632 aa13.73□□□□□ -0.21
HERC1-205ENST00000559886 LONRF3Q496Y0 759 aa13.73□□□□□ -0.21
HERC1-205ENST00000559886 LRCH2Q5VUJ6 765 aa13.73□□□□□ -0.21
HERC1-205ENST00000559886 CABP7Q86V35 215 aa13.73□□□□□ -0.21
HERC1-205ENST00000559886 MPHOSPH6Q99547 160 aaKnown RBP13.73□□□□□ -0.21
HERC1-205ENST00000559886 PYM1Q9BRP8 204 aaKnown RBP13.73□□□□□ -0.21
HERC1-205ENST00000559886 COBLO75128 1261 aa13.72□□□□□ -0.21
HERC1-205ENST00000559886 MAP2K2P36507 400 aa13.72□□□□□ -0.21
HERC1-205ENST00000559886 PPP2R5CQ13362 524 aa13.72□□□□□ -0.21
HERC1-205ENST00000559886 CAMK4Q16566 473 aa13.72□□□□□ -0.21
HERC1-205ENST00000559886 KRBA2Q6ZNG9 492 aa13.72□□□□□ -0.21
HERC1-205ENST00000559886 OTOP1Q7RTM1 612 aa13.72□□□□□ -0.21
HERC1-205ENST00000559886 TNMDQ9H2S6 317 aa13.72□□□□□ -0.21
HERC1-205ENST00000559886 SLC15A5A6NIM6 579 aa13.72□□□□□ -0.21
HERC1-205ENST00000559886 DHX15O43143 795 aaKnown RBP13.72□□□□□ -0.21
HERC1-205ENST00000559886 GAS7O60861 476 aa13.72□□□□□ -0.21
HERC1-205ENST00000559886 PDE4DQ08499 809 aa13.72□□□□□ -0.21
HERC1-205ENST00000559886 SEMA3FQ13275 785 aa13.72□□□□□ -0.21
HERC1-205ENST00000559886 KARSQ15046 597 aaKnown RBP13.72□□□□□ -0.21
HERC1-205ENST00000559886 E2F4Q16254 413 aa13.72□□□□□ -0.21
HERC1-205ENST00000559886 GNPTABQ3T906 1256 aa13.72□□□□□ -0.21
HERC1-205ENST00000559886 MORC4Q8TE76 937 aa13.72□□□□□ -0.21
HERC1-205ENST00000559886 CDHR1Q96JP9 859 aa13.72□□□□□ -0.21
HERC1-205ENST00000559886 SDF4Q9BRK5 362 aa13.72□□□□□ -0.21
HERC1-205ENST00000559886 DISC1Q9NRI5 854 aa13.72□□□□□ -0.21
HERC1-205ENST00000559886 USP25Q9UHP3 1055 aa13.72□□□□□ -0.21
HERC1-205ENST00000559886 DOCK5Q9H7D0 1870 aa13.72□□□□□ -0.21
HERC1-205ENST00000559886 CTAGE5O15320 804 aa13.71□□□□□ -0.21
HERC1-205ENST00000559886 ACTN4O43707 911 aaKnown RBP13.71□□□□□ -0.21
HERC1-205ENST00000559886 LETM1O95202 739 aaPredicted RBP13.71□□□□□ -0.21
HERC1-205ENST00000559886 VEGFBP49765 207 aa13.71□□□□□ -0.21
HERC1-205ENST00000559886 ITGB3BPQ13352 177 aaPredicted RBP13.71□□□□□ -0.21
HERC1-205ENST00000559886 KRT79Q5XKE5 535 aa13.71□□□□□ -0.21
HERC1-205ENST00000559886 B3GNT9Q6UX72 402 aa13.71□□□□□ -0.21
HERC1-205ENST00000559886 RBM43Q6ZSC3 357 aaKnown RBP13.71□□□□□ -0.21
HERC1-205ENST00000559886 ZNF467Q7Z7K2 595 aaPredicted RBP13.71□□□□□ -0.21
HERC1-205ENST00000559886 ELOA2Q8IYF1 753 aaPredicted RBP13.71□□□□□ -0.21
HERC1-205ENST00000559886 IQUBQ8NA54 791 aa13.71□□□□□ -0.21
HERC1-205ENST00000559886 DHX58Q96C10 678 aa13.71□□□□□ -0.21
HERC1-205ENST00000559886 TEKT3Q9BXF9 490 aa13.71□□□□□ -0.21
HERC1-205ENST00000559886 TBC1D22BQ9NU19 505 aa13.71□□□□□ -0.21
HERC1-205ENST00000559886 CCDC39Q9UFE4 941 aa13.71□□□□□ -0.21
HERC1-205ENST00000559886 SERTAD1Q9UHV2 236 aa13.71□□□□□ -0.21
HERC1-205ENST00000559886 THSD7BQ9C0I4 1608 aa13.71□□□□□ -0.21
HERC1-205ENST00000559886 SPATA31C2B4DYI2 1134 aa13.71□□□□□ -0.21
HERC1-205ENST00000559886 SLC26A4O43511 780 aa13.71□□□□□ -0.21
HERC1-205ENST00000559886 SLFN14P0C7P3 912 aa13.71□□□□□ -0.21
HERC1-205ENST00000559886 ICAM3P32942 547 aa13.71□□□□□ -0.21
HERC1-205ENST00000559886 CNNM3Q8NE01 707 aa13.71□□□□□ -0.21
HERC1-205ENST00000559886 DIS3Q9Y2L1 958 aaKnown RBP13.71□□□□□ -0.21
HERC1-205ENST00000559886 WDR81Q562E7 1941 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms