RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 UBE2HP62256 183 aa11.79□□□□□ -0.52
TPM1-221ENST00000559831 IL17AQ16552 155 aa11.79□□□□□ -0.52
TPM1-221ENST00000559831 TMEM266Q2M3C6 531 aa11.79□□□□□ -0.52
TPM1-221ENST00000559831 GNPTABQ3T906 1256 aa11.79□□□□□ -0.52
TPM1-221ENST00000559831 SPECC1Q5M775 1068 aa11.79□□□□□ -0.52
TPM1-221ENST00000559831 ARL6IP4Q66PJ3 421 aaKnown RBP11.79□□□□□ -0.52
TPM1-221ENST00000559831 ARMCX2Q7L311 632 aa11.79□□□□□ -0.52
TPM1-221ENST00000559831 NIPA1Q7RTP0 329 aa11.79□□□□□ -0.52
TPM1-221ENST00000559831 FBXO16Q8IX29 292 aaPredicted RBP11.79□□□□□ -0.52
TPM1-221ENST00000559831 SLFN12Q8IYM2 578 aa11.79□□□□□ -0.52
TPM1-221ENST00000559831 FSIP1Q8NA03 581 aa11.79□□□□□ -0.52
TPM1-221ENST00000559831 ETNPPLQ8TBG4 499 aa11.79□□□□□ -0.52
TPM1-221ENST00000559831 HAS1Q92839 578 aa11.79□□□□□ -0.52
TPM1-221ENST00000559831 GPRASP2Q96D09 838 aa11.79□□□□□ -0.52
TPM1-221ENST00000559831 MAML3Q96JK9 1138 aa11.79□□□□□ -0.52
TPM1-221ENST00000559831 MTMR9Q96QG7 549 aa11.79□□□□□ -0.52
TPM1-221ENST00000559831 ZNF577Q9BSK1 485 aa11.79□□□□□ -0.52
TPM1-221ENST00000559831 CSRNP2Q9H175 543 aa11.79□□□□□ -0.52
TPM1-221ENST00000559831 KCNMB3Q9NPA1 279 aa11.79□□□□□ -0.52
TPM1-221ENST00000559831 KCNH7Q9NS40 1196 aa11.79□□□□□ -0.52
TPM1-221ENST00000559831 DIS3Q9Y2L1 958 aaKnown RBP11.79□□□□□ -0.52
TPM1-221ENST00000559831 MORC2Q9Y6X9 1032 aaPredicted RBP11.79□□□□□ -0.52
TPM1-221ENST00000559831 WDR81Q562E7 1941 aa11.78□□□□□ -0.52
TPM1-221ENST00000559831 LOC102724159A0A0B4J2E5 919 aa11.78□□□□□ -0.52
TPM1-221ENST00000559831 DDX39AO00148 427 aaKnown RBP11.78□□□□□ -0.52
TPM1-221ENST00000559831 TBX3O15119 743 aa11.78□□□□□ -0.52
TPM1-221ENST00000559831 FKTNO75072 461 aa11.78□□□□□ -0.52
TPM1-221ENST00000559831 PWP2Q15269 919 aaKnown RBP11.78□□□□□ -0.52
TPM1-221ENST00000559831 AXDND1Q5T1B0 1012 aaPredicted RBP11.78□□□□□ -0.52
TPM1-221ENST00000559831 LRCH2Q5VUJ6 765 aa11.78□□□□□ -0.52
TPM1-221ENST00000559831 ADALQ6DHV7 355 aa11.78□□□□□ -0.52
TPM1-221ENST00000559831 ZNF467Q7Z7K2 595 aaPredicted RBP11.78□□□□□ -0.52
TPM1-221ENST00000559831 USP6NLQ92738 828 aa11.78□□□□□ -0.52
TPM1-221ENST00000559831 SLC5A5Q92911 643 aa11.78□□□□□ -0.52
TPM1-221ENST00000559831 ERO1AQ96HE7 468 aa11.78□□□□□ -0.52
TPM1-221ENST00000559831 FAM20AQ96MK3 541 aa11.78□□□□□ -0.52
TPM1-221ENST00000559831 INPP4AQ96PE3 977 aaPredicted RBP11.78□□□□□ -0.52
TPM1-221ENST00000559831 APBA2Q99767 749 aa11.78□□□□□ -0.52
TPM1-221ENST00000559831 TTC12Q9H892 705 aaPredicted RBP11.78□□□□□ -0.52
TPM1-221ENST00000559831 AGO4Q9HCK5 861 aaKnown RBP11.78□□□□□ -0.52
TPM1-221ENST00000559831 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.78□□□□□ -0.52
TPM1-221ENST00000559831 GJD2Q9UKL4 321 aa11.78□□□□□ -0.52
TPM1-221ENST00000559831 GABRQQ9UN88 632 aa11.78□□□□□ -0.52
TPM1-221ENST00000559831 IPO5O00410 1097 aaKnown RBP11.77□□□□□ -0.53
TPM1-221ENST00000559831 CHMP2AO43633 222 aa11.77□□□□□ -0.53
TPM1-221ENST00000559831 SORBS3O60504 671 aa11.77□□□□□ -0.53
TPM1-221ENST00000559831 GAS7O60861 476 aa11.77□□□□□ -0.53
TPM1-221ENST00000559831 RGS20O76081 388 aa11.77□□□□□ -0.53
TPM1-221ENST00000559831 LONP1P36776 959 aaKnown RBP11.77□□□□□ -0.53
TPM1-221ENST00000559831 CAP1Q01518 475 aa11.77□□□□□ -0.53
TPM1-221ENST00000559831 PRKCZQ05513 592 aa11.77□□□□□ -0.53
TPM1-221ENST00000559831 SEMA3FQ13275 785 aa11.77□□□□□ -0.53
TPM1-221ENST00000559831 CCL14Q16627 93 aa11.77□□□□□ -0.53
TPM1-221ENST00000559831 NCAPH2Q6IBW4 605 aa11.77□□□□□ -0.53
TPM1-221ENST00000559831 SHC4Q6S5L8 630 aa11.77□□□□□ -0.53
TPM1-221ENST00000559831 MORC4Q8TE76 937 aa11.77□□□□□ -0.53
TPM1-221ENST00000559831 ZNF296Q8WUU4 475 aaPredicted RBP11.77□□□□□ -0.53
TPM1-221ENST00000559831 MRPS27Q92552 414 aaKnown RBP11.77□□□□□ -0.53
TPM1-221ENST00000559831 CDHR1Q96JP9 859 aa11.77□□□□□ -0.53
TPM1-221ENST00000559831 TINF2Q9BSI4 451 aa11.77□□□□□ -0.53
TPM1-221ENST00000559831 TEKT3Q9BXF9 490 aa11.77□□□□□ -0.53
TPM1-221ENST00000559831 RAB34Q9BZG1 259 aa11.77□□□□□ -0.53
TPM1-221ENST00000559831 FLRT1Q9NZU1 646 aa11.77□□□□□ -0.53
TPM1-221ENST00000559831 PCDHA12Q9UN75 941 aa11.77□□□□□ -0.53
TPM1-221ENST00000559831 A0A1B0GVL5 298 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 A0A1W2PQ27 194 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 A0A1W2PQ64 194 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 A0A1W2PQD8 194 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 POTEMA6NI47 508 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 PP2D1A8MPX8 630 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 SPATA31C2B4DYI2 1134 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 PSMD10O75832 226 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 HOXC6P09630 235 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 CMA1P23946 247 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 HOXD10P28358 340 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 FLT3LGP49771 235 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 FXR2P51116 673 aaKnown RBP eCLIP11.76□□□□□ -0.53
TPM1-221ENST00000559831 ITGB3BPQ13352 177 aaPredicted RBP11.76□□□□□ -0.53
TPM1-221ENST00000559831 ZRSR1Q15695 479 aaKnown RBP11.76□□□□□ -0.53
TPM1-221ENST00000559831 RESP18Q5W5W9 173 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 MAMDC4Q6UXC1 1216 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 CCDC73Q6ZRK6 1079 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 DNAJC5GQ8N7S2 189 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 ZNF579Q8NAF0 562 aaKnown RBP11.76□□□□□ -0.53
TPM1-221ENST00000559831 RASSF8Q8NHQ8 419 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 SYMPKQ92797 1274 aaKnown RBP11.76□□□□□ -0.53
TPM1-221ENST00000559831 EPSTI1Q96J88 318 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 SDF4Q9BRK5 362 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 GOLPH3LQ9H4A5 285 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 VTA1Q9NP79 307 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 WBP1LQ9NX94 342 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 FAM13BQ9NYF5 915 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 LRWD1Q9UFC0 647 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 TCEAL9Q9UHQ7 104 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 ZHX1Q9UKY1 873 aaPredicted RBP11.76□□□□□ -0.53
TPM1-221ENST00000559831 SYNGAP1Q96PV0 1343 aa11.76□□□□□ -0.53
TPM1-221ENST00000559831 MYH9P35579 1960 aaKnown RBP11.76□□□□□ -0.53
TPM1-221ENST00000559831 MAFGO15525 162 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 ATP9AO75110 1047 aa11.75□□□□□ -0.53
TPM1-221ENST00000559831 SNAI1O95863 264 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms