RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 QRICH1Q2TAL8 776 aa6.78□□□□□ -1.32
USP3-212ENST00000559276 UVSSAQ2YD98 709 aa6.78□□□□□ -1.32
USP3-212ENST00000559276 GPATCH4Q5T3I0 446 aaKnown RBP6.78□□□□□ -1.32
USP3-212ENST00000559276 PPP2R2DQ66LE6 453 aa6.78□□□□□ -1.32
USP3-212ENST00000559276 GDF6Q6KF10 455 aaPredicted RBP6.78□□□□□ -1.32
USP3-212ENST00000559276 LRSAM1Q6UWE0 723 aa6.78□□□□□ -1.32
USP3-212ENST00000559276 TMCO2Q7Z6W1 182 aaPredicted RBP6.78□□□□□ -1.32
USP3-212ENST00000559276 SESTD1Q86VW0 696 aa6.78□□□□□ -1.32
USP3-212ENST00000559276 STAG2Q8N3U4 1231 aa6.78□□□□□ -1.32
USP3-212ENST00000559276 PNMA1Q8ND90 353 aa6.78□□□□□ -1.32
USP3-212ENST00000559276 ADAMTS19Q8TE59 1207 aa6.78□□□□□ -1.32
USP3-212ENST00000559276 AFG1LQ8WV93 481 aa6.78□□□□□ -1.32
USP3-212ENST00000559276 ESR2Q92731 530 aa6.78□□□□□ -1.32
USP3-212ENST00000559276 WNT8BQ93098 351 aa6.78□□□□□ -1.32
USP3-212ENST00000559276 RILPL2Q969X0 211 aa6.78□□□□□ -1.32
USP3-212ENST00000559276 MTMR8Q96EF0 704 aa6.78□□□□□ -1.32
USP3-212ENST00000559276 NECAB3Q96P71 396 aaPredicted RBP6.78□□□□□ -1.32
USP3-212ENST00000559276 MTIF3Q9H2K0 278 aaKnown RBP6.78□□□□□ -1.32
USP3-212ENST00000559276 CERS4Q9HA82 394 aa6.78□□□□□ -1.32
USP3-212ENST00000559276 ZSWIM5Q9P217 1185 aa6.78□□□□□ -1.32
USP3-212ENST00000559276 RAPGEFL1Q9UHV5 662 aa6.78□□□□□ -1.32
USP3-212ENST00000559276 DDX41Q9UJV9 622 aaKnown RBP6.78□□□□□ -1.32
USP3-212ENST00000559276 MTCH2Q9Y6C9 303 aa6.78□□□□□ -1.32
USP3-212ENST00000559276 MYO9BQ13459 2157 aa6.78□□□□□ -1.32
USP3-212ENST00000559276 ABCB11O95342 1321 aa6.77□□□□□ -1.32
USP3-212ENST00000559276 LCHNA4D1U4 455 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 ZBBXA8MT70 800 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 HAS3O00219 553 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 ZNF213O14771 459 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 KPNA6O60684 536 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 NBNO60934 754 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 LETM1O95202 739 aaPredicted RBP6.77□□□□□ -1.33
USP3-212ENST00000559276 HOXD8P13378 290 aaPredicted RBP6.77□□□□□ -1.33
USP3-212ENST00000559276 GSPT1P15170 499 aaKnown RBP6.77□□□□□ -1.33
USP3-212ENST00000559276 RFC2P35250 354 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 HSD17B4P51659 736 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 KCNQ1P51787 676 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 MRPS5P82675 430 aaKnown RBP6.77□□□□□ -1.33
USP3-212ENST00000559276 HMGN5P82970 282 aaKnown RBP6.77□□□□□ -1.33
USP3-212ENST00000559276 RBL2Q08999 1139 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 MKRN4PQ13434 485 aaPredicted RBP6.77□□□□□ -1.33
USP3-212ENST00000559276 MBTPS1Q14703 1052 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 TRIM71Q2Q1W2 868 aaKnown RBP6.77□□□□□ -1.33
USP3-212ENST00000559276 FAM47CQ5HY64 1035 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 MCTP1Q6DN14 999 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 SASS6Q6UVJ0 657 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 CWC27Q6UX04 472 aaKnown RBP6.77□□□□□ -1.33
USP3-212ENST00000559276 SEPT14Q6ZU15 432 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 CYB5R4Q7L1T6 521 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 HERC6Q8IVU3 1022 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 PHOSPHO2Q8TCD6 241 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 EMID1Q96A84 441 aaPredicted RBP6.77□□□□□ -1.33
USP3-212ENST00000559276 PRIMPOLQ96LW4 560 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 ZSCAN10Q96SZ4 725 aaPredicted RBP6.77□□□□□ -1.33
USP3-212ENST00000559276 MAF1Q9H063 256 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 RNF41Q9H4P4 317 aaPredicted RBP6.77□□□□□ -1.33
USP3-212ENST00000559276 BCAS3Q9H6U6 928 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 SENP2Q9HC62 589 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 PNMA2Q9UL42 364 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 TAF6LQ9Y6J9 622 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 PRRC2BQ5JSZ5 2229 aaKnown RBP6.77□□□□□ -1.33
USP3-212ENST00000559276 DOCK5Q9H7D0 1870 aa6.77□□□□□ -1.33
USP3-212ENST00000559276 SIP14410 1827 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 CD2BP2O95400 341 aaKnown RBP6.76□□□□□ -1.33
USP3-212ENST00000559276 GH1P01241 217 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 CXCL10P02778 98 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 TPM3P06753 285 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 NR3C2P08235 984 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 EIF2AK2P19525 551 aaKnown RBP6.76□□□□□ -1.33
USP3-212ENST00000559276 WDR5P61964 334 aaKnown RBP6.76□□□□□ -1.33
USP3-212ENST00000559276 DEFB103AP81534 67 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 ZNF200P98182 395 aaPredicted RBP6.76□□□□□ -1.33
USP3-212ENST00000559276 SP2Q02086 613 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 CUL4AQ13619 759 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 PTGISQ16647 500 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 ASPRV1Q53RT3 343 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 TMEM67Q5HYA8 995 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 CAVIN1Q6NZI2 390 aaKnown RBP6.76□□□□□ -1.33
USP3-212ENST00000559276 IFNLR1Q8IU57 520 aaPredicted RBP6.76□□□□□ -1.33
USP3-212ENST00000559276 IL31RAQ8NI17 732 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 NSUN6Q8TEA1 469 aaKnown RBP6.76□□□□□ -1.33
USP3-212ENST00000559276 GPKOWQ92917 476 aaPredicted RBP eCLIP6.76□□□□□ -1.33
USP3-212ENST00000559276 IWS1Q96ST2 819 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 SLC9A7Q96T83 725 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 RMDN3Q96TC7 470 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 DSCC1Q9BVC3 393 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 OSBPL7Q9BZF2 842 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 ZMYND15Q9H091 742 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 KAT14Q9H8E8 782 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 GPHNQ9NQX3 736 aaPredicted RBP6.76□□□□□ -1.33
USP3-212ENST00000559276 PXMP2Q9NR77 195 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 HDAC6Q9UBN7 1215 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 GTF2IRD1Q9UHL9 959 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 MAD2L2Q9UI95 211 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 RAD50Q92878 1312 aa6.76□□□□□ -1.33
USP3-212ENST00000559276 PALM3A6NDB9 673 aaPredicted RBP6.75□□□□□ -1.33
USP3-212ENST00000559276 CYTH3O43739 400 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 EIF3JO75822 258 aaKnown RBP6.75□□□□□ -1.33
USP3-212ENST00000559276 BAIAP3O94812 1187 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 F2P00734 622 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms