RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 JAG1P78504 1218 aa12.55□□□□□ -0.4
CLPX-204ENST00000559152 RRP1BQ14684 758 aaKnown RBP12.55□□□□□ -0.4
CLPX-204ENST00000559152 R3HDM1Q15032 1099 aaKnown RBP12.55□□□□□ -0.4
CLPX-204ENST00000559152 KCNK18Q7Z418 384 aa12.55□□□□□ -0.4
CLPX-204ENST00000559152 CCDC125Q86Z20 511 aa12.55□□□□□ -0.4
CLPX-204ENST00000559152 DNAJC19Q96DA6 116 aa12.55□□□□□ -0.4
CLPX-204ENST00000559152 CNTNAP1P78357 1384 aa12.55□□□□□ -0.4
CLPX-204ENST00000559152 GNA14O95837 355 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 RPA1P27694 616 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 ZNF76P36508 570 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 TGFB2P61812 414 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 MAP3K9P80192 1104 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 ZBED6P86452 979 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 COASYQ13057 564 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 ECM1Q16610 540 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 MAN2A1Q16706 1144 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 VWA3BQ502W6 1294 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 FAM26FQ5R3K3 315 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 PCMTD1Q96MG8 357 aaPredicted RBP12.54□□□□□ -0.4
CLPX-204ENST00000559152 VCPKMTQ9H867 229 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 MRPL44Q9H9J2 332 aaKnown RBP12.54□□□□□ -0.4
CLPX-204ENST00000559152 VEZTQ9HBM0 779 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 DNM3Q9UQ16 869 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 MRPL11Q9Y3B7 192 aaKnown RBP12.54□□□□□ -0.4
CLPX-204ENST00000559152 ARFGEF1Q9Y6D6 1849 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 EFCAB8A8MWE9 144 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 SSBP05455 408 aaKnown RBP eCLIP12.54□□□□□ -0.4
CLPX-204ENST00000559152 ERVK-24P63145 666 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 KRT83P78385 493 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 FKBP3Q00688 224 aaKnown RBP12.54□□□□□ -0.4
CLPX-204ENST00000559152 GLIPR1L2Q4G1C9 344 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 SPICE1Q8N0Z3 855 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 UBXN4Q92575 508 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 HPS3Q969F9 1004 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 FEZ1Q99689 392 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 RANBP17Q9H2T7 1088 aaKnown RBP12.54□□□□□ -0.4
CLPX-204ENST00000559152 LZTFL1Q9NQ48 299 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 PIM2Q9P1W9 311 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 FEM1BQ9UK73 627 aa12.54□□□□□ -0.4
CLPX-204ENST00000559152 EPN1Q9Y6I3 576 aaPredicted RBP12.54□□□□□ -0.4
CLPX-204ENST00000559152 GCOM1H8Y6P7 765 aaPredicted RBP12.53□□□□□ -0.4
CLPX-204ENST00000559152 IPO7O95373 1038 aaKnown RBP12.53□□□□□ -0.4
CLPX-204ENST00000559152 KRT18P05783 430 aaKnown RBP12.53□□□□□ -0.4
CLPX-204ENST00000559152 ASNSP08243 561 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 POLR2MP0CAP2 368 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 ECE1P42892 770 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 SNAP25P60880 206 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 TUBB4BP68371 445 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 CDK17Q00537 523 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 MAP3K10Q02779 954 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 MEA1Q16626 185 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 MIIPQ5JXC2 388 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 ARHGAP27Q6ZUM4 889 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 GPBP1Q86WP2 473 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 CCDC170Q8IYT3 715 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 KIFC2Q96AC6 838 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 CEP63Q96MT8 703 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 NDST4Q9H3R1 872 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 RABGAP1Q9Y3P9 1069 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 POTEB3A0JP26 581 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 POTECB2RU33 542 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 E9PMD0 336 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 NDUFA10O95299 355 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 ZBTB7AO95365 584 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 CYLC1P35663 651 aaPredicted RBP12.53□□□□□ -0.4
CLPX-204ENST00000559152 CAP2P40123 477 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 SPIRE1Q08AE8 756 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 FAM83BQ5T0W9 1011 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 POTEBQ6S5H4 581 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 PPP4R3CPQ6ZMV5 832 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 LENG9Q96B70 501 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 WDR24Q96S15 920 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 POLR3CQ9BUI4 534 aaPredicted RBP12.53□□□□□ -0.4
CLPX-204ENST00000559152 TTYH3Q9C0H2 523 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 GINM1Q9NU53 330 aa12.53□□□□□ -0.4
CLPX-204ENST00000559152 ZBTB12Q9Y330 459 aaPredicted RBP12.53□□□□□ -0.4
CLPX-204ENST00000559152 MYH7BA7E2Y1 1941 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 FRMD3A2A2Y4 597 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 FAM86B1E9PN63 330 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 RNF225M0QZC1 329 aaPredicted RBP12.52□□□□□ -0.41
CLPX-204ENST00000559152 FAM86B2P0C5J1 330 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 CYP11B2P19099 503 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 SLC12A3P55017 1021 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 TNIP1Q15025 636 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 HERC4Q5GLZ8 1057 aaPredicted RBP12.52□□□□□ -0.41
CLPX-204ENST00000559152 NCAPH2Q6IBW4 605 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 ZNF662Q6ZS27 426 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 CATSPER3Q86XQ3 398 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 SYT2Q8N9I0 419 aaPredicted RBP12.52□□□□□ -0.41
CLPX-204ENST00000559152 ACER1Q8TDN7 264 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 JDP2Q8WYK2 163 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 GJA10Q969M2 543 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 ZBED3Q96IU2 234 aaPredicted RBP12.52□□□□□ -0.41
CLPX-204ENST00000559152 EDEM3Q9BZQ6 932 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 MRFAP1Q9Y605 127 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 OPLAHO14841 1288 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 MSH4O15457 936 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 MED24O75448 989 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 TNFAIP1Q13829 316 aa12.52□□□□□ -0.41
CLPX-204ENST00000559152 ELF2Q15723 593 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms