RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 TMC3Q7Z5M5 1100 aa6.69□□□□□ -1.34
CASC4-207ENST00000559037 ANKS4BQ8N8V4 417 aa6.69□□□□□ -1.34
CASC4-207ENST00000559037 TCTN2Q96GX1 697 aa6.69□□□□□ -1.34
CASC4-207ENST00000559037 SHDQ96IW2 340 aa6.69□□□□□ -1.34
CASC4-207ENST00000559037 KIRREL1Q96J84 757 aa6.69□□□□□ -1.34
CASC4-207ENST00000559037 SPON1Q9HCB6 807 aa6.69□□□□□ -1.34
CASC4-207ENST00000559037 FBXL21Q9UKT6 434 aa6.69□□□□□ -1.34
CASC4-207ENST00000559037 TOGARAM1Q9Y4F4 1720 aa6.69□□□□□ -1.34
CASC4-207ENST00000559037 NSD2O96028 1365 aa6.69□□□□□ -1.34
CASC4-207ENST00000559037 UBR3Q6ZT12 1888 aa6.68□□□□□ -1.34
CASC4-207ENST00000559037 SMG6Q86US8 1419 aaKnown RBP6.68□□□□□ -1.34
CASC4-207ENST00000559037 SCN11AQ9UI33 1791 aa6.68□□□□□ -1.34
CASC4-207ENST00000559037 DNAJC25-GNG10A0A024R161 153 aa6.68□□□□□ -1.34
CASC4-207ENST00000559037 WASH4PA8MWX3 477 aa6.68□□□□□ -1.34
CASC4-207ENST00000559037 GSNP06396 782 aa6.68□□□□□ -1.34
CASC4-207ENST00000559037 GLI1P08151 1106 aa6.68□□□□□ -1.34
CASC4-207ENST00000559037 ZGLP1P0C6A0 271 aa6.68□□□□□ -1.34
CASC4-207ENST00000559037 EIF4A2Q14240 407 aaKnown RBP6.68□□□□□ -1.34
CASC4-207ENST00000559037 RALGPS1Q5JS13 557 aa6.68□□□□□ -1.34
CASC4-207ENST00000559037 KRTAP19-1Q8IUB9 90 aa6.68□□□□□ -1.34
CASC4-207ENST00000559037 ZNF512BQ96KM6 892 aaPredicted RBP6.68□□□□□ -1.34
CASC4-207ENST00000559037 STK32BQ9NY57 414 aa6.68□□□□□ -1.34
CASC4-207ENST00000559037 TCFL5Q9UL49 500 aa6.68□□□□□ -1.34
CASC4-207ENST00000559037 KIF7Q2M1P5 1343 aa6.68□□□□□ -1.34
CASC4-207ENST00000559037 A0A087WZG4 1122 aa6.67□□□□□ -1.34
CASC4-207ENST00000559037 BMP8BP34820 402 aa6.67□□□□□ -1.34
CASC4-207ENST00000559037 TNNT2P45379 298 aaPredicted RBP6.67□□□□□ -1.34
CASC4-207ENST00000559037 RBM10P98175 930 aaKnown RBP6.67□□□□□ -1.34
CASC4-207ENST00000559037 SNW1Q13573 536 aaKnown RBP6.67□□□□□ -1.34
CASC4-207ENST00000559037 SNX17Q15036 470 aa6.67□□□□□ -1.34
CASC4-207ENST00000559037 TNNI3KQ59H18 835 aa6.67□□□□□ -1.34
CASC4-207ENST00000559037 MYLIPQ8WY64 445 aa6.67□□□□□ -1.34
CASC4-207ENST00000559037 ZNF428Q96B54 188 aa6.67□□□□□ -1.34
CASC4-207ENST00000559037 IGSF5Q9NSI5 407 aa6.67□□□□□ -1.34
CASC4-207ENST00000559037 KNSTRNQ9Y448 316 aa6.67□□□□□ -1.34
CASC4-207ENST00000559037 FHOD1Q9Y613 1164 aa6.67□□□□□ -1.34
CASC4-207ENST00000559037 PCDH11XQ9BZA7 1347 aa6.67□□□□□ -1.34
CASC4-207ENST00000559037 PCDH11YQ9BZA8 1340 aa6.67□□□□□ -1.34
CASC4-207ENST00000559037 C5P01031 1676 aa6.67□□□□□ -1.34
CASC4-207ENST00000559037 C9IYK1 514 aa6.66□□□□□ -1.34
CASC4-207ENST00000559037 ITGA4P13612 1032 aa6.66□□□□□ -1.34
CASC4-207ENST00000559037 KIR2DL1P43626 348 aaPredicted RBP6.66□□□□□ -1.34
CASC4-207ENST00000559037 KIR2DL2P43627 348 aaPredicted RBP6.66□□□□□ -1.34
CASC4-207ENST00000559037 TCEAL1Q15170 157 aa6.66□□□□□ -1.34
CASC4-207ENST00000559037 ZYXQ15942 572 aaKnown RBP6.66□□□□□ -1.34
CASC4-207ENST00000559037 ZNF827Q17R98 1081 aa6.66□□□□□ -1.34
CASC4-207ENST00000559037 TMEM67Q5HYA8 995 aa6.66□□□□□ -1.34
CASC4-207ENST00000559037 RUFY4Q6ZNE9 571 aa6.66□□□□□ -1.34
CASC4-207ENST00000559037 MORC1Q86VD1 984 aa6.66□□□□□ -1.34
CASC4-207ENST00000559037 PPFIBP1Q86W92 1011 aa6.66□□□□□ -1.34
CASC4-207ENST00000559037 POU5F2Q8N7G0 328 aa6.66□□□□□ -1.34
CASC4-207ENST00000559037 ABHD4Q8TB40 342 aa6.66□□□□□ -1.34
CASC4-207ENST00000559037 DSCC1Q9BVC3 393 aa6.66□□□□□ -1.34
CASC4-207ENST00000559037 ADAMTS10Q9H324 1103 aa6.66□□□□□ -1.34
CASC4-207ENST00000559037 GFOD1Q9NXC2 390 aa6.66□□□□□ -1.34
CASC4-207ENST00000559037 A0A1W2PQH9 124 aa6.65□□□□□ -1.34
CASC4-207ENST00000559037 SHOXO15266 292 aa6.65□□□□□ -1.34
CASC4-207ENST00000559037 ZNF205O95201 554 aa6.65□□□□□ -1.34
CASC4-207ENST00000559037 ZBTB7AO95365 584 aa6.65□□□□□ -1.34
CASC4-207ENST00000559037 SSBP05455 408 aaKnown RBP eCLIP6.65□□□□□ -1.34
CASC4-207ENST00000559037 SYPP08247 313 aa6.65□□□□□ -1.34
CASC4-207ENST00000559037 HK2P52789 917 aa6.65□□□□□ -1.34
CASC4-207ENST00000559037 SLC7A5Q01650 507 aa6.65□□□□□ -1.34
CASC4-207ENST00000559037 NOL9Q5SY16 702 aaKnown RBP6.65□□□□□ -1.34
CASC4-207ENST00000559037 CWF19L1Q69YN2 538 aaKnown RBP6.65□□□□□ -1.34
CASC4-207ENST00000559037 IFNL2Q8IZJ0 200 aa6.65□□□□□ -1.34
CASC4-207ENST00000559037 SLC43A3Q8NBI5 491 aa6.65□□□□□ -1.34
CASC4-207ENST00000559037 LINC01599Q8WXQ3 324 aa6.65□□□□□ -1.34
CASC4-207ENST00000559037 FCRL2Q96LA5 508 aaPredicted RBP6.65□□□□□ -1.34
CASC4-207ENST00000559037 TINF2Q9BSI4 451 aa6.65□□□□□ -1.34
CASC4-207ENST00000559037 MTFR1LQ9H019 292 aa6.65□□□□□ -1.34
CASC4-207ENST00000559037 GBP3Q9H0R5 595 aa6.65□□□□□ -1.34
CASC4-207ENST00000559037 GP6Q9HCN6 339 aa6.65□□□□□ -1.34
CASC4-207ENST00000559037 WHRNQ9P202 907 aa6.65□□□□□ -1.34
CASC4-207ENST00000559037 SF3B6Q9Y3B4 125 aaKnown RBP6.65□□□□□ -1.34
CASC4-207ENST00000559037 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.65□□□□□ -1.34
CASC4-207ENST00000559037 IGSF1Q8N6C5 1336 aa6.65□□□□□ -1.35
CASC4-207ENST00000559037 PLEKHG2Q9H7P9 1386 aa6.65□□□□□ -1.35
CASC4-207ENST00000559037 ZNF831Q5JPB2 1677 aa6.65□□□□□ -1.35
CASC4-207ENST00000559037 FAM86C2PA6NEL3 165 aa6.64□□□□□ -1.35
CASC4-207ENST00000559037 NAT2P11245 290 aa6.64□□□□□ -1.35
CASC4-207ENST00000559037 PHKG2P15735 406 aa6.64□□□□□ -1.35
CASC4-207ENST00000559037 CD247P20963 164 aa6.64□□□□□ -1.35
CASC4-207ENST00000559037 IL13P35225 146 aa6.64□□□□□ -1.35
CASC4-207ENST00000559037 MTHFSP49914 203 aa6.64□□□□□ -1.35
CASC4-207ENST00000559037 ZNF143P52747 638 aaPredicted RBP6.64□□□□□ -1.35
CASC4-207ENST00000559037 ARID5AQ03989 594 aa6.64□□□□□ -1.35
CASC4-207ENST00000559037 AXDND1Q5T1B0 1012 aaPredicted RBP6.64□□□□□ -1.35
CASC4-207ENST00000559037 TDRD10Q5VZ19 366 aaKnown RBP6.64□□□□□ -1.35
CASC4-207ENST00000559037 PIGBQ92521 554 aa6.64□□□□□ -1.35
CASC4-207ENST00000559037 MAP6Q96JE9 813 aa6.64□□□□□ -1.35
CASC4-207ENST00000559037 FOXP3Q9BZS1 431 aa6.64□□□□□ -1.35
CASC4-207ENST00000559037 CWC22Q9HCG8 908 aaKnown RBP6.64□□□□□ -1.35
CASC4-207ENST00000559037 CCNL1Q9UK58 526 aaPredicted RBP6.64□□□□□ -1.35
CASC4-207ENST00000559037 PNPLA7Q6ZV29 1317 aa6.64□□□□□ -1.35
CASC4-207ENST00000559037 LTBP3Q9NS15 1303 aa6.64□□□□□ -1.35
CASC4-207ENST00000559037 NPC1L1Q9UHC9 1359 aa6.64□□□□□ -1.35
CASC4-207ENST00000559037 TMEM82A0PJX8 343 aa6.63□□□□□ -1.35
CASC4-207ENST00000559037 ERVV-2B6SEH9 535 aa6.63□□□□□ -1.35
CASC4-207ENST00000559037 C4BP0C0L5 1744 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms