RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 DPF3Q92784 378 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 PHKBQ93100 1093 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 PIGSQ96S52 555 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 FEZ1Q99689 392 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 SPZ1Q9BXG8 430 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 SH2D4AQ9H788 454 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 GJB4Q9NTQ9 266 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 ZNF214Q9UL59 606 aaPredicted RBP8.41□□□□□ -1.06
TRAF3-206ENST00000558880 SLC45A1Q9Y2W3 748 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 RIPK3Q9Y572 518 aa8.41□□□□□ -1.06
TRAF3-206ENST00000558880 HTTP42858 3142 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 A0A1W2PRU2 124 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 MANSC4A6NHS7 340 aaPredicted RBP8.4□□□□□ -1.06
TRAF3-206ENST00000558880 PDHXO00330 501 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 VWA5AO00534 786 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 TRAK2O60296 914 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 STAU1O95793 577 aaKnown RBP8.4□□□□□ -1.06
TRAF3-206ENST00000558880 CALM1P0DP23 149 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 CALM2P0DP24 149 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 CALM3P0DP25 149 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 BCRP11274 1271 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 CTGFP29279 349 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 MCM2P49736 904 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 TMEM132BQ14DG7 1078 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 GPATCH4Q5T3I0 446 aaKnown RBP8.4□□□□□ -1.06
TRAF3-206ENST00000558880 SYDE2Q5VT97 1194 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 FOXD4L5Q5VV16 416 aaPredicted RBP8.4□□□□□ -1.06
TRAF3-206ENST00000558880 GADL1Q6ZQY3 521 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 FASTKD5Q7L8L6 764 aaKnown RBP8.4□□□□□ -1.06
TRAF3-206ENST00000558880 CCDC82Q8N4S0 544 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 ARMC5Q96C12 935 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 ERO1AQ96HE7 468 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 ZSCAN31Q96LW9 406 aaPredicted RBP8.4□□□□□ -1.06
TRAF3-206ENST00000558880 SLKQ9H2G2 1235 aaPredicted RBP8.4□□□□□ -1.06
TRAF3-206ENST00000558880 EFCC1Q9HA90 598 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 SLC38A10Q9HBR0 1119 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 NXF1Q9UBU9 619 aaKnown RBP8.4□□□□□ -1.06
TRAF3-206ENST00000558880 FEM1BQ9UK73 627 aa8.4□□□□□ -1.06
TRAF3-206ENST00000558880 MYPNQ86TC9 1320 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 PTPDC1A2A3K4 754 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 ATP2A1O14983 1001 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 PRPF3O43395 683 aaKnown RBP8.39□□□□□ -1.07
TRAF3-206ENST00000558880 EDIL3O43854 480 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 SKIP12755 728 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 STAT2P52630 851 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 HERVK_113P62684 666 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 NFX1Q12986 1120 aaKnown RBP8.39□□□□□ -1.07
TRAF3-206ENST00000558880 COG2Q14746 738 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 PPP2R5BQ15173 497 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 CCDC96Q2M329 555 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 QRICH1Q2TAL8 776 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.39□□□□□ -1.07
TRAF3-206ENST00000558880 C17orf99Q6UX52 265 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 RNF217Q8TC41 542 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 CLEC4DQ8WXI8 215 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 TBC1D5Q92609 795 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 SLF1Q9BQI6 1058 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 CFHR5Q9BXR6 569 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 SH2B1Q9NRF2 756 aaPredicted RBP8.39□□□□□ -1.07
TRAF3-206ENST00000558880 RBM28Q9NW13 759 aaKnown RBP8.39□□□□□ -1.07
TRAF3-206ENST00000558880 TMOD4Q9NZQ9 345 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 CEP290O15078 2479 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 MYH8P13535 1937 aa8.39□□□□□ -1.07
TRAF3-206ENST00000558880 CUL9Q8IWT3 2517 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 A0A0G2JMZ2 1700 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 CENPFP49454 3210 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 STK36Q9NRP7 1315 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 ZBTB5O15062 677 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 FLOT1O75955 427 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 WFS1O76024 890 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 INHBEP58166 350 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 FGD1P98174 961 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 CRHR2Q13324 411 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 CDC37Q16543 378 aaPredicted RBP8.38□□□□□ -1.07
TRAF3-206ENST00000558880 PFKFB3Q16875 520 aaPredicted RBP8.38□□□□□ -1.07
TRAF3-206ENST00000558880 SLC9C1Q4G0N8 1177 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 WWC2Q6AWC2 1192 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 TREML4Q6UXN2 200 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 PRICKLE2Q7Z3G6 844 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 FAM160B2Q86V87 743 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 PRPF38AQ8NAV1 312 aaKnown RBP8.38□□□□□ -1.07
TRAF3-206ENST00000558880 CTCFLQ8NI51 663 aaPredicted RBP8.38□□□□□ -1.07
TRAF3-206ENST00000558880 INTS4Q96HW7 963 aaKnown RBP8.38□□□□□ -1.07
TRAF3-206ENST00000558880 LLPHQ9BRT6 129 aaKnown RBP8.38□□□□□ -1.07
TRAF3-206ENST00000558880 RNF26Q9BY78 433 aaPredicted RBP8.38□□□□□ -1.07
TRAF3-206ENST00000558880 TANGO6Q9C0B7 1094 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 RAVER2Q9HCJ3 691 aaKnown RBP8.38□□□□□ -1.07
TRAF3-206ENST00000558880 VAT1LQ9HCJ6 419 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 ZCCHC17Q9NP64 241 aaKnown RBP8.38□□□□□ -1.07
TRAF3-206ENST00000558880 MORF4L1Q9UBU8 362 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 COL6A3P12111 3177 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 BRCA2P51587 3418 aa8.38□□□□□ -1.07
TRAF3-206ENST00000558880 PNMA6FA0A0J9YX94 578 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 M0R2N6 131 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 STXBP3O00186 592 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 TLR2O60603 784 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 KIF5BP33176 963 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 GNAQP50148 359 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 GHRHRQ02643 423 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 PTSQ03393 145 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms