RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 TMEM260Q9NX78 707 aa12.63□□□□□ -0.39
PBX1-213ENST00000558796 PCDHA6Q9UN73 950 aa12.63□□□□□ -0.39
PBX1-213ENST00000558796 PCDHA8Q9Y5H6 950 aa12.63□□□□□ -0.39
PBX1-213ENST00000558796 SMCO2A6NFE2 343 aa12.62□□□□□ -0.39
PBX1-213ENST00000558796 KIAA0355O15063 1070 aa12.62□□□□□ -0.39
PBX1-213ENST00000558796 TLR3O15455 904 aaKnown RBP12.62□□□□□ -0.39
PBX1-213ENST00000558796 PRPF3O43395 683 aaKnown RBP12.62□□□□□ -0.39
PBX1-213ENST00000558796 STAM2O75886 525 aa12.62□□□□□ -0.39
PBX1-213ENST00000558796 ZNF286BP0CG31 522 aa12.62□□□□□ -0.39
PBX1-213ENST00000558796 RAG1P15918 1043 aa12.62□□□□□ -0.39
PBX1-213ENST00000558796 IFNAR1P17181 557 aa12.62□□□□□ -0.39
PBX1-213ENST00000558796 BMP8BP34820 402 aa12.62□□□□□ -0.39
PBX1-213ENST00000558796 FAM47CQ5HY64 1035 aa12.62□□□□□ -0.39
PBX1-213ENST00000558796 CELF3Q5SZQ8 465 aaKnown RBP12.62□□□□□ -0.39
PBX1-213ENST00000558796 KCNV1Q6PIU1 500 aa12.62□□□□□ -0.39
PBX1-213ENST00000558796 PPTC7Q8NI37 304 aa12.62□□□□□ -0.39
PBX1-213ENST00000558796 EMID1Q96A84 441 aaPredicted RBP12.62□□□□□ -0.39
PBX1-213ENST00000558796 SPATA33Q96N06 139 aa12.62□□□□□ -0.39
PBX1-213ENST00000558796 RNF26Q9BY78 433 aaPredicted RBP12.62□□□□□ -0.39
PBX1-213ENST00000558796 ANO3Q9BYT9 981 aa12.62□□□□□ -0.39
PBX1-213ENST00000558796 PPP1R12CQ9BZL4 782 aa12.62□□□□□ -0.39
PBX1-213ENST00000558796 TRPV6Q9H1D0 765 aa12.62□□□□□ -0.39
PBX1-213ENST00000558796 BCAS3Q9H6U6 928 aa12.62□□□□□ -0.39
PBX1-213ENST00000558796 TBX21Q9UL17 535 aa12.62□□□□□ -0.39
PBX1-213ENST00000558796 TET1Q8NFU7 2136 aa12.61□□□□□ -0.39
PBX1-213ENST00000558796 LOXHD1Q8IVV2 1947 aa12.61□□□□□ -0.39
PBX1-213ENST00000558796 CPLX1O14810 134 aa12.61□□□□□ -0.39
PBX1-213ENST00000558796 ADAMTS3O15072 1205 aa12.61□□□□□ -0.39
PBX1-213ENST00000558796 FIBPO43427 364 aa12.61□□□□□ -0.39
PBX1-213ENST00000558796 B4GALT4O60513 344 aa12.61□□□□□ -0.39
PBX1-213ENST00000558796 KPNA6O60684 536 aa12.61□□□□□ -0.39
PBX1-213ENST00000558796 EIF5BO60841 1220 aaKnown RBP12.61□□□□□ -0.39
PBX1-213ENST00000558796 CD4P01730 458 aa12.61□□□□□ -0.39
PBX1-213ENST00000558796 FXR1P51114 621 aaKnown RBP eCLIP12.61□□□□□ -0.39
PBX1-213ENST00000558796 AK2P54819 239 aa12.61□□□□□ -0.39
PBX1-213ENST00000558796 LAMC2Q13753 1193 aa12.61□□□□□ -0.39
PBX1-213ENST00000558796 DGKDQ16760 1214 aa12.61□□□□□ -0.39
PBX1-213ENST00000558796 NBPF20Q3BBV1 942 aa12.61□□□□□ -0.39
PBX1-213ENST00000558796 MYSM1Q5VVJ2 828 aa12.61□□□□□ -0.39
PBX1-213ENST00000558796 XRRA1Q6P2D8 792 aa12.61□□□□□ -0.39
PBX1-213ENST00000558796 TDHQ8IZJ6 230 aa12.61□□□□□ -0.39
PBX1-213ENST00000558796 ZNF274Q96GC6 653 aaPredicted RBP12.61□□□□□ -0.39
PBX1-213ENST00000558796 ALDH8A1Q9H2A2 487 aaPredicted RBP12.61□□□□□ -0.39
PBX1-213ENST00000558796 EHMT1Q9H9B1 1298 aa12.61□□□□□ -0.39
PBX1-213ENST00000558796 MLXIPQ9HAP2 919 aa12.61□□□□□ -0.39
PBX1-213ENST00000558796 TRMT13Q9NUP7 481 aaKnown RBP12.61□□□□□ -0.39
PBX1-213ENST00000558796 PKD2L1Q9P0L9 805 aa12.61□□□□□ -0.39
PBX1-213ENST00000558796 TPCN1Q9ULQ1 816 aa12.61□□□□□ -0.39
PBX1-213ENST00000558796 A0A1W2PPC1 479 aa12.6□□□□□ -0.39
PBX1-213ENST00000558796 SPATA31C2B4DYI2 1134 aa12.6□□□□□ -0.39
PBX1-213ENST00000558796 DTNBO60941 627 aa12.6□□□□□ -0.39
PBX1-213ENST00000558796 TGFB3P10600 412 aa12.6□□□□□ -0.39
PBX1-213ENST00000558796 ITGB5P18084 799 aa12.6□□□□□ -0.39
PBX1-213ENST00000558796 ICAM3P32942 547 aa12.6□□□□□ -0.39
PBX1-213ENST00000558796 SP4Q02446 784 aa12.6□□□□□ -0.39
PBX1-213ENST00000558796 SCRN1Q12765 414 aa12.6□□□□□ -0.39
PBX1-213ENST00000558796 HSDL1Q3SXM5 330 aa12.6□□□□□ -0.39
PBX1-213ENST00000558796 JAKMIP3Q5VZ66 844 aa12.6□□□□□ -0.39
PBX1-213ENST00000558796 CYFIP1Q7L576 1253 aa12.6□□□□□ -0.39
PBX1-213ENST00000558796 NLRX1Q86UT6 975 aa12.6□□□□□ -0.39
PBX1-213ENST00000558796 TRIM22Q8IYM9 498 aa12.6□□□□□ -0.39
PBX1-213ENST00000558796 CCDC12Q8WUD4 166 aaPredicted RBP12.6□□□□□ -0.39
PBX1-213ENST00000558796 KAT2BQ92831 832 aa12.6□□□□□ -0.39
PBX1-213ENST00000558796 VPS54Q9P1Q0 977 aa12.6□□□□□ -0.39
PBX1-213ENST00000558796 TELO2Q9Y4R8 837 aa12.6□□□□□ -0.39
PBX1-213ENST00000558796 UMODL1Q5DID0 1318 aa12.6□□□□□ -0.39
PBX1-213ENST00000558796 ESYT2A0FGR8 921 aa12.59□□□□□ -0.39
PBX1-213ENST00000558796 NOP56O00567 594 aaKnown RBP12.59□□□□□ -0.39
PBX1-213ENST00000558796 SOX1O00570 391 aaPredicted RBP12.59□□□□□ -0.39
PBX1-213ENST00000558796 LARGE1O95461 756 aa12.59□□□□□ -0.39
PBX1-213ENST00000558796 TIMP1P01033 207 aa12.59□□□□□ -0.39
PBX1-213ENST00000558796 CYP2C18P33260 490 aa12.59□□□□□ -0.39
PBX1-213ENST00000558796 CLK2P49760 499 aaKnown RBP12.59□□□□□ -0.39
PBX1-213ENST00000558796 FPGSQ05932 587 aa12.59□□□□□ -0.39
PBX1-213ENST00000558796 SSRP1Q08945 709 aaKnown RBP12.59□□□□□ -0.39
PBX1-213ENST00000558796 AP3B2Q13367 1082 aa12.59□□□□□ -0.39
PBX1-213ENST00000558796 MTMR1Q13613 665 aa12.59□□□□□ -0.39
PBX1-213ENST00000558796 NEDD9Q14511 834 aa12.59□□□□□ -0.39
PBX1-213ENST00000558796 REXO1Q8N1G1 1221 aaKnown RBP12.59□□□□□ -0.39
PBX1-213ENST00000558796 CCDC148Q8NFR7 591 aa12.59□□□□□ -0.39
PBX1-213ENST00000558796 RASGRP4Q8TDF6 673 aa12.59□□□□□ -0.39
PBX1-213ENST00000558796 GPRASP2Q96D09 838 aa12.59□□□□□ -0.39
PBX1-213ENST00000558796 IL17RAQ96F46 866 aa12.59□□□□□ -0.39
PBX1-213ENST00000558796 ALG1Q9BT22 464 aa12.59□□□□□ -0.39
PBX1-213ENST00000558796 ZMYND12Q9H0C1 365 aa12.59□□□□□ -0.39
PBX1-213ENST00000558796 GLT8D2Q9H1C3 349 aa12.59□□□□□ -0.39
PBX1-213ENST00000558796 SLKQ9H2G2 1235 aaPredicted RBP12.59□□□□□ -0.39
PBX1-213ENST00000558796 HIPK3Q9H422 1215 aa12.59□□□□□ -0.39
PBX1-213ENST00000558796 C6orf50Q9HD87 102 aa12.59□□□□□ -0.39
PBX1-213ENST00000558796 UBIAD1Q9Y5Z9 338 aa12.59□□□□□ -0.39
PBX1-213ENST00000558796 SIP14410 1827 aa12.59□□□□□ -0.39
PBX1-213ENST00000558796 PTPRSQ13332 1948 aa12.58□□□□□ -0.39
PBX1-213ENST00000558796 F2P00734 622 aa12.58□□□□□ -0.4
PBX1-213ENST00000558796 FOSP01100 380 aaPredicted RBP12.58□□□□□ -0.4
PBX1-213ENST00000558796 CYP2C9P11712 490 aa12.58□□□□□ -0.4
PBX1-213ENST00000558796 HOXD8P13378 290 aaPredicted RBP12.58□□□□□ -0.4
PBX1-213ENST00000558796 KCNA2P16389 499 aa12.58□□□□□ -0.4
PBX1-213ENST00000558796 SREBF1P36956 1147 aa12.58□□□□□ -0.4
PBX1-213ENST00000558796 PSEN2P49810 448 aa12.58□□□□□ -0.4
PBX1-213ENST00000558796 NEK4P51957 841 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms