RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 MSNP26038 577 aaKnown RBP14.54□□□□□ -0.08
SMAD3-207ENST00000558763 GHRHRQ02643 423 aa14.54□□□□□ -0.08
SMAD3-207ENST00000558763 TRAF1Q13077 416 aa14.54□□□□□ -0.08
SMAD3-207ENST00000558763 ZNF658Q5TYW1 1059 aaPredicted RBP14.54□□□□□ -0.08
SMAD3-207ENST00000558763 APTXQ7Z2E3 356 aaKnown RBP14.54□□□□□ -0.08
SMAD3-207ENST00000558763 CYP2W1Q8TAV3 490 aa14.54□□□□□ -0.08
SMAD3-207ENST00000558763 CCDC102AQ96A19 550 aa14.54□□□□□ -0.08
SMAD3-207ENST00000558763 HHIPL1Q96JK4 782 aa14.54□□□□□ -0.08
SMAD3-207ENST00000558763 AGBL1Q96MI9 1066 aa14.54□□□□□ -0.08
SMAD3-207ENST00000558763 C7orf25Q9BPX7 421 aa14.54□□□□□ -0.08
SMAD3-207ENST00000558763 ASCC2Q9H1I8 757 aaPredicted RBP14.54□□□□□ -0.08
SMAD3-207ENST00000558763 SAMSN1Q9NSI8 373 aaKnown RBP14.54□□□□□ -0.08
SMAD3-207ENST00000558763 ABCB11O95342 1321 aa14.54□□□□□ -0.08
SMAD3-207ENST00000558763 SYNRGQ9UMZ2 1314 aa14.54□□□□□ -0.08
SMAD3-207ENST00000558763 GOLGA6L6A8MZA4 724 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 BTBD19C9JJ37 291 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 RHOBTB3O94955 611 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 HOXA7P31268 230 aaPredicted RBP14.53□□□□□ -0.08
SMAD3-207ENST00000558763 DSG3P32926 999 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 TPM4P67936 248 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 KMT5BQ4FZB7 885 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 CDKAL1Q5VV42 579 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 CPXCR1Q8N123 301 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 SNX29Q8TEQ0 813 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 CLEC4DQ8WXI8 215 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 NAP1L5Q96NT1 182 aaPredicted RBP14.53□□□□□ -0.08
SMAD3-207ENST00000558763 UIMC1Q96RL1 719 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 PTPN18Q99952 460 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 RAB34Q9BZG1 259 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 SLC38A10Q9HBR0 1119 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 STK17AQ9UEE5 414 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 PYCARDQ9ULZ3 195 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 PCDHA12Q9UN75 941 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 MRPL11Q9Y3B7 192 aaKnown RBP14.53□□□□□ -0.08
SMAD3-207ENST00000558763 CTDP1Q9Y5B0 961 aaPredicted RBP14.53□□□□□ -0.08
SMAD3-207ENST00000558763 MANSC4A6NHS7 340 aaPredicted RBP14.53□□□□□ -0.08
SMAD3-207ENST00000558763 PDHXO00330 501 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 VWA5AO00534 786 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 TBX3O15119 743 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 CFBP00751 764 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 TPM3P06753 285 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 CYP2C8P10632 490 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 HSD17B4P51659 736 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 LRMPQ12912 555 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 PABPC4Q13310 644 aaKnown RBP eCLIP14.53□□□□□ -0.08
SMAD3-207ENST00000558763 ARID5BQ14865 1188 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 DEFB115Q30KQ5 88 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 PRR16Q569H4 304 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 CACTINQ8WUQ7 758 aaKnown RBP14.53□□□□□ -0.08
SMAD3-207ENST00000558763 CALML4Q96GE6 196 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 ZIC5Q96T25 663 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 RMND1Q9NWS8 449 aa14.53□□□□□ -0.08
SMAD3-207ENST00000558763 RASSF10A6NK89 507 aa14.52□□□□□ -0.09
SMAD3-207ENST00000558763 GCOM1H8Y6P7 765 aaPredicted RBP14.52□□□□□ -0.09
SMAD3-207ENST00000558763 MSH4O15457 936 aa14.52□□□□□ -0.09
SMAD3-207ENST00000558763 PEX10O60683 326 aa14.52□□□□□ -0.09
SMAD3-207ENST00000558763 POLR2MP0CAP2 368 aa14.52□□□□□ -0.09
SMAD3-207ENST00000558763 SPATA1Q5VX52 437 aa14.52□□□□□ -0.09
SMAD3-207ENST00000558763 KLHL10Q6JEL2 608 aa14.52□□□□□ -0.09
SMAD3-207ENST00000558763 FCHSD1Q86WN1 690 aa14.52□□□□□ -0.09
SMAD3-207ENST00000558763 DRC7Q8IY82 874 aa14.52□□□□□ -0.09
SMAD3-207ENST00000558763 GIMAP8Q8ND71 665 aaPredicted RBP14.52□□□□□ -0.09
SMAD3-207ENST00000558763 LARP4BQ92615 738 aaKnown RBP14.52□□□□□ -0.09
SMAD3-207ENST00000558763 RAD54LQ92698 747 aa14.52□□□□□ -0.09
SMAD3-207ENST00000558763 RAVER2Q9HCJ3 691 aaKnown RBP14.52□□□□□ -0.09
SMAD3-207ENST00000558763 HOXC10Q9NYD6 342 aa14.52□□□□□ -0.09
SMAD3-207ENST00000558763 COL20A1Q9P218 1284 aa14.52□□□□□ -0.09
SMAD3-207ENST00000558763 VAV3Q9UKW4 847 aa14.52□□□□□ -0.09
SMAD3-207ENST00000558763 A0A0G2JMZ2 1700 aa14.52□□□□□ -0.09
SMAD3-207ENST00000558763 MYMKA6NI61 221 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 NFIBO00712 420 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 ZBED4O75132 1171 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 OSBPP22059 807 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 STAT3P40763 770 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 PRCPP42785 496 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 STX17P56962 302 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 HERVK_113P62684 666 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 SEMA3FQ13275 785 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 MCM6Q14566 821 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 HSP90AA4PQ58FG1 418 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 KRT79Q5XKE5 535 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 CNNM4Q6P4Q7 775 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 ANKRD23Q86SG2 305 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 ADSSL1Q8N142 457 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 CAPNS2Q96L46 248 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 CCPG1Q9ULG6 757 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 CTNND2Q9UQB3 1225 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 MYPNQ86TC9 1320 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 IGF2BP3O00425 579 aaKnown RBP eCLIP14.51□□□□□ -0.09
SMAD3-207ENST00000558763 AOC2O75106 756 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 PLS1Q14651 629 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 SLFN12Q8IYM2 578 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 SMCR8Q8TEV9 937 aaPredicted RBP14.51□□□□□ -0.09
SMAD3-207ENST00000558763 PAGR1Q9BTK6 254 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 RWDD2AQ9UIY3 292 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 PNMA3Q9UL41 463 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 RPTORQ8N122 1335 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 CEP350Q5VT06 3117 aa14.51□□□□□ -0.09
SMAD3-207ENST00000558763 TESPA1A2RU30 521 aaPredicted RBP14.5□□□□□ -0.09
SMAD3-207ENST00000558763 UBASH3AP57075 661 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms