RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 TOP1MTQ969P6 601 aa14.12□□□□□ -0.15
SMAD3-206ENST00000558739 RMDN1Q96DB5 314 aa14.12□□□□□ -0.15
SMAD3-206ENST00000558739 GMCL1Q96IK5 515 aa14.12□□□□□ -0.15
SMAD3-206ENST00000558739 CNTNAP3BQ96NU0 1288 aa14.12□□□□□ -0.15
SMAD3-206ENST00000558739 ALG1Q9BT22 464 aa14.12□□□□□ -0.15
SMAD3-206ENST00000558739 IFIH1Q9BYX4 1025 aaKnown RBP14.12□□□□□ -0.15
SMAD3-206ENST00000558739 CNTNAP3Q9BZ76 1288 aa14.12□□□□□ -0.15
SMAD3-206ENST00000558739 BOLA2Q9H3K6 86 aa14.12□□□□□ -0.15
SMAD3-206ENST00000558739 BARX2Q9UMQ3 279 aaPredicted RBP14.12□□□□□ -0.15
SMAD3-206ENST00000558739 MTMR7Q9Y216 660 aa14.12□□□□□ -0.15
SMAD3-206ENST00000558739 FAM208BQ5VWN6 2430 aa14.12□□□□□ -0.15
SMAD3-206ENST00000558739 KIAA1217Q5T5P2 1943 aa14.11□□□□□ -0.15
SMAD3-206ENST00000558739 GLP2RO95838 553 aa14.11□□□□□ -0.15
SMAD3-206ENST00000558739 ICAM1P05362 532 aa14.11□□□□□ -0.15
SMAD3-206ENST00000558739 ARP10275 920 aa14.11□□□□□ -0.15
SMAD3-206ENST00000558739 DNAJB1P25685 340 aa14.11□□□□□ -0.15
SMAD3-206ENST00000558739 PTK7Q13308 1070 aa14.11□□□□□ -0.15
SMAD3-206ENST00000558739 LY6KQ17RY6 165 aa14.11□□□□□ -0.15
SMAD3-206ENST00000558739 SBK1Q52WX2 424 aa14.11□□□□□ -0.15
SMAD3-206ENST00000558739 PLEKHG4Q58EX7 1191 aa14.11□□□□□ -0.15
SMAD3-206ENST00000558739 CCDC62Q6P9F0 684 aa14.11□□□□□ -0.15
SMAD3-206ENST00000558739 C7orf31Q8N865 590 aa14.11□□□□□ -0.15
SMAD3-206ENST00000558739 CHURC1Q8WUH1 139 aa14.11□□□□□ -0.15
SMAD3-206ENST00000558739 CLEC4DQ8WXI8 215 aa14.11□□□□□ -0.15
SMAD3-206ENST00000558739 PCDHGC5Q9Y5F6 944 aa14.11□□□□□ -0.15
SMAD3-206ENST00000558739 MYH7BA7E2Y1 1941 aa14.1□□□□□ -0.15
SMAD3-206ENST00000558739 C5orf67F2Z3F1 127 aa14.1□□□□□ -0.15
SMAD3-206ENST00000558739 ANP32CO43423 234 aa14.1□□□□□ -0.15
SMAD3-206ENST00000558739 SP100P23497 879 aaPredicted RBP14.1□□□□□ -0.15
SMAD3-206ENST00000558739 SLC16A2P36021 539 aa14.1□□□□□ -0.15
SMAD3-206ENST00000558739 THPOP40225 353 aa14.1□□□□□ -0.15
SMAD3-206ENST00000558739 PSEN2P49810 448 aa14.1□□□□□ -0.15
SMAD3-206ENST00000558739 TTBK2Q6IQ55 1244 aa14.1□□□□□ -0.15
SMAD3-206ENST00000558739 CEP85Q6P2H3 762 aa14.1□□□□□ -0.15
SMAD3-206ENST00000558739 RHPN1Q8TCX5 695 aa14.1□□□□□ -0.15
SMAD3-206ENST00000558739 STRBPQ96SI9 672 aaKnown RBP14.1□□□□□ -0.15
SMAD3-206ENST00000558739 IRF2BPLQ9H1B7 796 aa14.1□□□□□ -0.15
SMAD3-206ENST00000558739 SMOC2Q9H3U7 446 aa14.1□□□□□ -0.15
SMAD3-206ENST00000558739 SYNPO2Q9UMS6 1093 aa14.1□□□□□ -0.15
SMAD3-206ENST00000558739 ASPMQ8IZT6 3477 aa14.1□□□□□ -0.15
SMAD3-206ENST00000558739 FRYQ5TBA9 3013 aa14.09□□□□□ -0.15
SMAD3-206ENST00000558739 NMT2O60551 498 aa14.09□□□□□ -0.15
SMAD3-206ENST00000558739 MMP1P03956 469 aa14.09□□□□□ -0.15
SMAD3-206ENST00000558739 CTSHP09668 335 aa14.09□□□□□ -0.15
SMAD3-206ENST00000558739 RPS6P62753 249 aaKnown RBP14.09□□□□□ -0.15
SMAD3-206ENST00000558739 MFSD10Q14728 455 aa14.09□□□□□ -0.15
SMAD3-206ENST00000558739 UBE3CQ15386 1083 aa14.09□□□□□ -0.15
SMAD3-206ENST00000558739 PTPN21Q16825 1174 aa14.09□□□□□ -0.15
SMAD3-206ENST00000558739 KIAA0753Q2KHM9 967 aa14.09□□□□□ -0.15
SMAD3-206ENST00000558739 NKD2Q969F2 451 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-206ENST00000558739 C11orf84Q9BUA3 381 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-206ENST00000558739 RANBP17Q9H2T7 1088 aaKnown RBP14.09□□□□□ -0.15
SMAD3-206ENST00000558739 SETXQ7Z333 2677 aaKnown RBP14.09□□□□□ -0.15
SMAD3-206ENST00000558739 EMSYQ7Z589 1322 aa14.09□□□□□ -0.15
SMAD3-206ENST00000558739 ZZEF1O43149 2961 aa14.08□□□□□ -0.16
SMAD3-206ENST00000558739 RSPH10B2B2RC85 870 aa14.08□□□□□ -0.16
SMAD3-206ENST00000558739 F2P00734 622 aa14.08□□□□□ -0.16
SMAD3-206ENST00000558739 RSPH10BP0C881 870 aa14.08□□□□□ -0.16
SMAD3-206ENST00000558739 ICAM3P32942 547 aa14.08□□□□□ -0.16
SMAD3-206ENST00000558739 BMPR1AP36894 532 aa14.08□□□□□ -0.16
SMAD3-206ENST00000558739 COASYQ13057 564 aa14.08□□□□□ -0.16
SMAD3-206ENST00000558739 SEPT14Q6ZU15 432 aa14.08□□□□□ -0.16
SMAD3-206ENST00000558739 ZNF444Q8N0Y2 327 aaPredicted RBP14.08□□□□□ -0.16
SMAD3-206ENST00000558739 FIBCD1Q8N539 461 aa14.08□□□□□ -0.16
SMAD3-206ENST00000558739 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.08□□□□□ -0.16
SMAD3-206ENST00000558739 RC3H2Q9HBD1 1191 aaKnown RBP14.08□□□□□ -0.16
SMAD3-206ENST00000558739 PLXNA4Q9HCM2 1894 aa14.08□□□□□ -0.16
SMAD3-206ENST00000558739 HAS3O00219 553 aa14.07□□□□□ -0.16
SMAD3-206ENST00000558739 IPO8O15397 1037 aaKnown RBP14.07□□□□□ -0.16
SMAD3-206ENST00000558739 SORBS3O60504 671 aa14.07□□□□□ -0.16
SMAD3-206ENST00000558739 PLA2G6O60733 806 aa14.07□□□□□ -0.16
SMAD3-206ENST00000558739 TSPY3P0CV98 308 aa14.07□□□□□ -0.16
SMAD3-206ENST00000558739 TSPY8P0CW00 308 aa14.07□□□□□ -0.16
SMAD3-206ENST00000558739 RLBP1P12271 317 aa14.07□□□□□ -0.16
SMAD3-206ENST00000558739 RNF207Q6ZRF8 634 aa14.07□□□□□ -0.16
SMAD3-206ENST00000558739 RBM23Q86U06 439 aaKnown RBP14.07□□□□□ -0.16
SMAD3-206ENST00000558739 SERINC5Q86VE9 423 aa14.07□□□□□ -0.16
SMAD3-206ENST00000558739 ERC1Q8IUD2 1116 aa14.07□□□□□ -0.16
SMAD3-206ENST00000558739 VN1R2Q8NFZ6 395 aa14.07□□□□□ -0.16
SMAD3-206ENST00000558739 NEDD1Q8NHV4 660 aa14.07□□□□□ -0.16
SMAD3-206ENST00000558739 RIPOR3Q96MK2 946 aa14.07□□□□□ -0.16
SMAD3-206ENST00000558739 PHF7Q9BWX1 381 aaPredicted RBP14.07□□□□□ -0.16
SMAD3-206ENST00000558739 LMAN2LQ9H0V9 348 aa14.07□□□□□ -0.16
SMAD3-206ENST00000558739 ADGRA3Q8IWK6 1321 aa14.07□□□□□ -0.16
SMAD3-206ENST00000558739 LOC102724159A0A0B4J2E5 919 aa14.06□□□□□ -0.16
SMAD3-206ENST00000558739 GH1P01241 217 aa14.06□□□□□ -0.16
SMAD3-206ENST00000558739 CASTP20810 708 aaKnown RBP14.06□□□□□ -0.16
SMAD3-206ENST00000558739 NRIP1P48552 1158 aa14.06□□□□□ -0.16
SMAD3-206ENST00000558739 TFAP4Q01664 338 aa14.06□□□□□ -0.16
SMAD3-206ENST00000558739 PWP2Q15269 919 aaKnown RBP14.06□□□□□ -0.16
SMAD3-206ENST00000558739 CCDC96Q2M329 555 aa14.06□□□□□ -0.16
SMAD3-206ENST00000558739 RCSD1Q6JBY9 416 aa14.06□□□□□ -0.16
SMAD3-206ENST00000558739 DGLUCYQ7Z3D6 616 aa14.06□□□□□ -0.16
SMAD3-206ENST00000558739 EFHBQ8N7U6 833 aa14.06□□□□□ -0.16
SMAD3-206ENST00000558739 OSBP2Q969R2 916 aa14.06□□□□□ -0.16
SMAD3-206ENST00000558739 IL17RAQ96F46 866 aa14.06□□□□□ -0.16
SMAD3-206ENST00000558739 HAUS7Q99871 368 aa14.06□□□□□ -0.16
SMAD3-206ENST00000558739 CDH22Q9UJ99 828 aa14.06□□□□□ -0.16
SMAD3-206ENST00000558739 STX8Q9UNK0 236 aa14.06□□□□□ -0.16
SMAD3-206ENST00000558739 TTC3P53804 2025 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms