RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 TXNP10599 105 aaKnown RBP11.78□□□□□ -0.52
TPM1-212ENST00000558347 EIF2AK2P19525 551 aaKnown RBP11.78□□□□□ -0.52
TPM1-212ENST00000558347 HOXA13P31271 388 aaPredicted RBP11.78□□□□□ -0.52
TPM1-212ENST00000558347 MRPL12P52815 198 aaKnown RBP11.78□□□□□ -0.52
TPM1-212ENST00000558347 SHHQ15465 462 aa11.78□□□□□ -0.52
TPM1-212ENST00000558347 APOA5Q6Q788 366 aa11.78□□□□□ -0.52
TPM1-212ENST00000558347 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.78□□□□□ -0.52
TPM1-212ENST00000558347 SCFD2Q8WU76 684 aa11.78□□□□□ -0.52
TPM1-212ENST00000558347 PIBF1Q8WXW3 757 aa11.78□□□□□ -0.52
TPM1-212ENST00000558347 PXMP2Q9NR77 195 aa11.78□□□□□ -0.52
TPM1-212ENST00000558347 COL6A3P12111 3177 aa11.78□□□□□ -0.52
TPM1-212ENST00000558347 PNMA6FA0A0J9YX94 578 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 CCDC69A6NI79 296 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 NKRFO15226 690 aaKnown RBP eCLIP11.77□□□□□ -0.521e-6■■□□□ 14
TPM1-212ENST00000558347 OFD1O75665 1012 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 TIMP1P01033 207 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 RXRAP19793 462 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 PDCP20941 246 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 PURAQ00577 322 aaKnown RBP11.77□□□□□ -0.52
TPM1-212ENST00000558347 SCRN1Q12765 414 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 ITGA7Q13683 1181 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 TTLL4Q14679 1199 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 STXBP2Q15833 593 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 LY6KQ17RY6 165 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 ARHGEF16Q5VV41 709 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 CCDC62Q6P9F0 684 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 NFXL1Q6ZNB6 911 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 SEPT14Q6ZU15 432 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 Q7L0L9 218 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 RAB11FIP4Q86YS3 637 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 CCDC83Q8IWF9 413 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 NECAB1Q8N987 351 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 IWS1Q96ST2 819 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 MAP3K14Q99558 947 aa11.77□□□□□ -0.52
TPM1-212ENST00000558347 LLPHQ9BRT6 129 aaKnown RBP11.77□□□□□ -0.52
TPM1-212ENST00000558347 GOLGA8BA8MQT2 603 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 ZBTB43O43298 467 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 PLEKHA8P1O95397 391 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 NR3C2P08235 984 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 MYL3P08590 195 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 CPT1AP50416 773 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 SYNE3Q6ZMZ3 975 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 CMTR1Q8N1G2 835 aaKnown RBP11.76□□□□□ -0.53
TPM1-212ENST00000558347 CTCFLQ8NI51 663 aaPredicted RBP11.76□□□□□ -0.53
TPM1-212ENST00000558347 PDCD2LQ9BRP1 358 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 SPZ1Q9BXG8 430 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 POLR3EQ9NVU0 708 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 MAP3K20Q9NYL2 800 aaKnown RBP11.76□□□□□ -0.53
TPM1-212ENST00000558347 MTMR6Q9Y217 621 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 SLC12A7Q9Y666 1083 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 SCN10AQ9Y5Y9 1956 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 A6NJR5 290 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 TLR3O15455 904 aaKnown RBP11.76□□□□□ -0.53
TPM1-212ENST00000558347 B4GALT4O60513 344 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 GADD45BO75293 160 aaPredicted RBP11.76□□□□□ -0.53
TPM1-212ENST00000558347 RGS20O76081 388 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 CALM1P0DP23 149 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 CALM2P0DP24 149 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 CALM3P0DP25 149 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 GJB2P29033 226 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 KIF5BP33176 963 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 FPGSQ05932 587 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 STK3Q13188 491 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 GPR153Q6NV75 609 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 SRBD1Q8N5C6 995 aaKnown RBP11.76□□□□□ -0.53
TPM1-212ENST00000558347 SAMD3Q8N6K7 520 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 IL31RAQ8NI17 732 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 SMARCC2Q8TAQ2 1214 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 PPP1R13LQ8WUF5 828 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 CHAMP1Q96JM3 812 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 PPP1R12CQ9BZL4 782 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 TRPV6Q9H1D0 765 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 ZKSCAN5Q9Y2L8 839 aa11.76□□□□□ -0.53
TPM1-212ENST00000558347 UMODL1Q5DID0 1318 aa11.75□□□□□ -0.53
TPM1-212ENST00000558347 GCOM1H8Y6P7 765 aaPredicted RBP11.75□□□□□ -0.53
TPM1-212ENST00000558347 EIF3JO75822 258 aaKnown RBP11.75□□□□□ -0.53
TPM1-212ENST00000558347 POLR2MP0CAP2 368 aa11.75□□□□□ -0.53
TPM1-212ENST00000558347 MYCLP12524 364 aaPredicted RBP11.75□□□□□ -0.53
TPM1-212ENST00000558347 METAP2P50579 478 aaKnown RBP eCLIP11.75□□□□□ -0.53
TPM1-212ENST00000558347 CCT2P78371 535 aaKnown RBP11.75□□□□□ -0.53
TPM1-212ENST00000558347 ARHGAP1Q07960 439 aa11.75□□□□□ -0.53
TPM1-212ENST00000558347 TRAF1Q13077 416 aa11.75□□□□□ -0.53
TPM1-212ENST00000558347 PGM5Q15124 567 aa11.75□□□□□ -0.53
TPM1-212ENST00000558347 MFSD5Q6N075 450 aa11.75□□□□□ -0.53
TPM1-212ENST00000558347 FCHSD1Q86WN1 690 aa11.75□□□□□ -0.53
TPM1-212ENST00000558347 DEFB123Q8N688 67 aa11.75□□□□□ -0.53
TPM1-212ENST00000558347 NSUN7Q8NE18 718 aaKnown RBP11.75□□□□□ -0.53
TPM1-212ENST00000558347 ZFP91Q96JP5 570 aaPredicted RBP11.75□□□□□ -0.53
TPM1-212ENST00000558347 MTG1Q9BT17 334 aaPredicted RBP11.75□□□□□ -0.53
TPM1-212ENST00000558347 DDX41Q9UJV9 622 aaKnown RBP11.75□□□□□ -0.53
TPM1-212ENST00000558347 CDH23Q9H251 3354 aa11.74□□□□□ -0.53
TPM1-212ENST00000558347 GOLGA8AA7E2F4 631 aa11.74□□□□□ -0.53
TPM1-212ENST00000558347 GH1P01241 217 aa11.74□□□□□ -0.53
TPM1-212ENST00000558347 CSF2RAP15509 400 aa11.74□□□□□ -0.53
TPM1-212ENST00000558347 SMARCA1P28370 1054 aa11.74□□□□□ -0.53
TPM1-212ENST00000558347 CYP2C18P33260 490 aa11.74□□□□□ -0.53
TPM1-212ENST00000558347 HMGN5P82970 282 aaKnown RBP11.74□□□□□ -0.53
TPM1-212ENST00000558347 BRDTQ58F21 947 aaPredicted RBP11.74□□□□□ -0.53
TPM1-212ENST00000558347 C16orf59Q7L2K0 433 aa11.74□□□□□ -0.53
TPM1-212ENST00000558347 VSIG10LQ86VR7 867 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms