RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CPA5Q8WXQ8 436 aa5.12□□□□□ -1.59
SPG11-206ENST00000558093 KCNJ15Q99712 375 aa5.12□□□□□ -1.59
SPG11-206ENST00000558093 JAM3Q9BX67 310 aa5.12□□□□□ -1.59
SPG11-206ENST00000558093 ZSWIM4Q9H7M6 989 aa5.12□□□□□ -1.59
SPG11-206ENST00000558093 ZNF652Q9Y2D9 606 aa5.12□□□□□ -1.59
SPG11-206ENST00000558093 TRAF6Q9Y4K3 522 aa5.12□□□□□ -1.59
SPG11-206ENST00000558093 SOD2P04179 222 aa5.11□□□□□ -1.59
SPG11-206ENST00000558093 SPIRE1Q08AE8 756 aa5.11□□□□□ -1.59
SPG11-206ENST00000558093 LONRF2Q1L5Z9 754 aa5.11□□□□□ -1.59
SPG11-206ENST00000558093 ZC3H12BQ5HYM0 836 aaKnown RBP5.11□□□□□ -1.59
SPG11-206ENST00000558093 FOXB2Q5VYV0 432 aa5.11□□□□□ -1.59
SPG11-206ENST00000558093 CD300LDQ6UXZ3 194 aa5.11□□□□□ -1.59
SPG11-206ENST00000558093 SIAH1Q8IUQ4 282 aa5.11□□□□□ -1.59
SPG11-206ENST00000558093 FAM126BQ8IXS8 530 aa5.11□□□□□ -1.59
SPG11-206ENST00000558093 ZSWIM2Q8NEG5 633 aa5.11□□□□□ -1.59
SPG11-206ENST00000558093 THAP3Q8WTV1 239 aaPredicted RBP5.11□□□□□ -1.59
SPG11-206ENST00000558093 PTPRN2Q92932 1015 aa5.11□□□□□ -1.59
SPG11-206ENST00000558093 DACT3Q96B18 629 aaPredicted RBP5.11□□□□□ -1.59
SPG11-206ENST00000558093 EXOC2Q96KP1 924 aa5.11□□□□□ -1.59
SPG11-206ENST00000558093 DHRS4Q9BTZ2 278 aa5.11□□□□□ -1.59
SPG11-206ENST00000558093 EPB41L4AQ9HCS5 686 aaPredicted RBP5.11□□□□□ -1.59
SPG11-206ENST00000558093 MYOTQ9UBF9 498 aa5.11□□□□□ -1.59
SPG11-206ENST00000558093 CDK11AQ9UQ88 783 aaPredicted RBP5.11□□□□□ -1.59
SPG11-206ENST00000558093 MRPS23Q9Y3D9 190 aaKnown RBP5.11□□□□□ -1.59
SPG11-206ENST00000558093 FAM47E-STBD1D6RA91 191 aa5.1□□□□□ -1.59
SPG11-206ENST00000558093 NAT1P18440 290 aa5.1□□□□□ -1.59
SPG11-206ENST00000558093 STAT5AP42229 794 aa5.1□□□□□ -1.59
SPG11-206ENST00000558093 GABREP78334 506 aa5.1□□□□□ -1.59
SPG11-206ENST00000558093 GUCY1A3Q02108 690 aa5.1□□□□□ -1.59
SPG11-206ENST00000558093 VMACQ2NL98 169 aa5.1□□□□□ -1.59
SPG11-206ENST00000558093 EMC4Q5J8M3 183 aa5.1□□□□□ -1.59
SPG11-206ENST00000558093 SPOCD1Q6ZMY3 1216 aa5.1□□□□□ -1.59
SPG11-206ENST00000558093 ASXL2Q76L83 1435 aa5.1□□□□□ -1.59
SPG11-206ENST00000558093 MIB1Q86YT6 1006 aa5.1□□□□□ -1.59
SPG11-206ENST00000558093 PIP4K2CQ8TBX8 421 aa5.1□□□□□ -1.59
SPG11-206ENST00000558093 PHOSPHO1Q8TCT1 267 aa5.1□□□□□ -1.59
SPG11-206ENST00000558093 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.1□□□□□ -1.59
SPG11-206ENST00000558093 ZBTB8AQ96BR9 441 aa5.1□□□□□ -1.59
SPG11-206ENST00000558093 NGRNQ9NPE2 291 aaKnown RBP5.1□□□□□ -1.59
SPG11-206ENST00000558093 NDOR1Q9UHB4 597 aa5.1□□□□□ -1.59
SPG11-206ENST00000558093 NUB1Q9Y5A7 615 aa5.1□□□□□ -1.59
SPG11-206ENST00000558093 TCRBV5S2A0A599 114 aa5.09□□□□□ -1.59
SPG11-206ENST00000558093 SMARCA5O60264 1052 aaPredicted RBP5.09□□□□□ -1.59
SPG11-206ENST00000558093 C8BP07358 591 aa5.09□□□□□ -1.59
SPG11-206ENST00000558093 BMP7P18075 431 aa5.09□□□□□ -1.59
SPG11-206ENST00000558093 NKX3-2P78367 333 aa5.09□□□□□ -1.59
SPG11-206ENST00000558093 C2orf27AQ580R0 203 aa5.09□□□□□ -1.59
SPG11-206ENST00000558093 FNIP1Q8TF40 1166 aa5.09□□□□□ -1.59
SPG11-206ENST00000558093 LNPKQ9C0E8 428 aa5.09□□□□□ -1.59
SPG11-206ENST00000558093 SMOC1Q9H4F8 434 aa5.09□□□□□ -1.59
SPG11-206ENST00000558093 ZCCHC4Q9H5U6 513 aa5.09□□□□□ -1.59
SPG11-206ENST00000558093 IPPKQ9H8X2 491 aa5.09□□□□□ -1.59
SPG11-206ENST00000558093 PCDH18Q9HCL0 1135 aa5.09□□□□□ -1.59
SPG11-206ENST00000558093 SLC6A20Q9NP91 592 aa5.09□□□□□ -1.59
SPG11-206ENST00000558093 DTLQ9NZJ0 730 aa5.09□□□□□ -1.59
SPG11-206ENST00000558093 SFMBT1Q9UHJ3 866 aa5.09□□□□□ -1.59
SPG11-206ENST00000558093 PTCH2Q9Y6C5 1203 aa5.09□□□□□ -1.59
SPG11-206ENST00000558093 SLC27A2O14975 620 aa5.08□□□□□ -1.6
SPG11-206ENST00000558093 SASH1O94885 1247 aa5.08□□□□□ -1.6
SPG11-206ENST00000558093 PLA2G1BP04054 148 aaKnown RBP5.08□□□□□ -1.6
SPG11-206ENST00000558093 COL6A2P12110 1019 aa5.08□□□□□ -1.6
SPG11-206ENST00000558093 PAK1Q13153 545 aa5.08□□□□□ -1.6
SPG11-206ENST00000558093 SMAD4Q13485 552 aaKnown RBP5.08□□□□□ -1.6
SPG11-206ENST00000558093 CYP4F22Q6NT55 531 aa5.08□□□□□ -1.6
SPG11-206ENST00000558093 EP400NLQ6ZTU2 488 aa5.08□□□□□ -1.6
SPG11-206ENST00000558093 OTOP3Q7RTS5 596 aa5.08□□□□□ -1.6
SPG11-206ENST00000558093 TRIM48Q8IWZ4 208 aa5.08□□□□□ -1.6
SPG11-206ENST00000558093 SP8Q8IXZ3 490 aa5.08□□□□□ -1.6
SPG11-206ENST00000558093 FAM26EQ8N5C1 309 aa5.08□□□□□ -1.6
SPG11-206ENST00000558093 LINC01356Q8N9X3 169 aa5.08□□□□□ -1.6
SPG11-206ENST00000558093 ARRDC4Q8NCT1 418 aa5.08□□□□□ -1.6
SPG11-206ENST00000558093 TOE1Q96GM8 510 aaKnown RBP5.08□□□□□ -1.6
SPG11-206ENST00000558093 NOX5Q96PH1 765 aa5.08□□□□□ -1.6
SPG11-206ENST00000558093 CDIP1Q9H305 208 aa5.08□□□□□ -1.6
SPG11-206ENST00000558093 PCDHA8Q9Y5H6 950 aa5.08□□□□□ -1.6
SPG11-206ENST00000558093 EFCAB14O75071 495 aa5.07□□□□□ -1.6
SPG11-206ENST00000558093 TADA3O75528 432 aa5.07□□□□□ -1.6
SPG11-206ENST00000558093 C6orf222P0C671 652 aaPredicted RBP5.07□□□□□ -1.6
SPG11-206ENST00000558093 ST5P78524 1137 aa5.07□□□□□ -1.6
SPG11-206ENST00000558093 CCDC144BQ3MJ40 725 aa5.07□□□□□ -1.6
SPG11-206ENST00000558093 FAM47CQ5HY64 1035 aa5.07□□□□□ -1.6
SPG11-206ENST00000558093 TTLL7Q6ZT98 887 aa5.07□□□□□ -1.6
SPG11-206ENST00000558093 ZC3H7AQ8IWR0 971 aaKnown RBP5.07□□□□□ -1.6
SPG11-206ENST00000558093 GORASP1Q9BQQ3 440 aa5.07□□□□□ -1.6
SPG11-206ENST00000558093 CATSPERZQ9NTU4 200 aa5.07□□□□□ -1.6
SPG11-206ENST00000558093 NTMQ9P121 344 aa5.07□□□□□ -1.6
SPG11-206ENST00000558093 ASH2LQ9UBL3 628 aa5.07□□□□□ -1.6
SPG11-206ENST00000558093 DSEQ9UL01 958 aa5.07□□□□□ -1.6
SPG11-206ENST00000558093 CCDC163A0A0D9SF12 145 aa5.06□□□□□ -1.6
SPG11-206ENST00000558093 FFAR3O14843 346 aa5.06□□□□□ -1.6
SPG11-206ENST00000558093 TRIM13O60858 407 aa5.06□□□□□ -1.6
SPG11-206ENST00000558093 CRTAMO95727 393 aa5.06□□□□□ -1.6
SPG11-206ENST00000558093 INHBBP09529 407 aa5.06□□□□□ -1.6
SPG11-206ENST00000558093 SRGAP2CP0DJJ0 459 aa5.06□□□□□ -1.6
SPG11-206ENST00000558093 HTRA3P83110 453 aa5.06□□□□□ -1.6
SPG11-206ENST00000558093 CAP1Q01518 475 aa5.06□□□□□ -1.6
SPG11-206ENST00000558093 GRIN1Q05586 938 aa5.06□□□□□ -1.6
SPG11-206ENST00000558093 VWA3BQ502W6 1294 aa5.06□□□□□ -1.6
SPG11-206ENST00000558093 FBLN7Q53RD9 439 aa5.06□□□□□ -1.6
SPG11-206ENST00000558093 SAPCD2Q86UD0 394 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms