RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 PSEN1P49768 467 aa10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 EMP3P54852 163 aa10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 MRPS9P82933 396 aaKnown RBP10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 FPGSQ05932 587 aa10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 NBPF20Q3BBV1 942 aa10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 BRDTQ58F21 947 aaPredicted RBP10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 MFSD5Q6N075 450 aa10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 GPR153Q6NV75 609 aa10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 USP17L6PQ6QN14 398 aa10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 SYNE3Q6ZMZ3 975 aa10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 GPKOWQ92917 476 aaPredicted RBP eCLIP10.13□□□□□ -0.794e-9■■■□□ 16.8
SNRPA1-206ENST00000558059 EMID1Q96A84 441 aaPredicted RBP10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 JAKMIP1Q96N16 626 aaKnown RBP10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 FAM217BQ9NTX9 383 aaPredicted RBP10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 SEC63Q9UGP8 760 aaKnown RBP10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 MRVI1Q9Y6F6 885 aa10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 TET1Q8NFU7 2136 aa10.13□□□□□ -0.79
SNRPA1-206ENST00000558059 CNTNAP5Q8WYK1 1306 aa10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 KLF18A0A0U1RQI7 1052 aa10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 REC8O95072 547 aa10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 CYP2C18P33260 490 aa10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 SP2Q02086 613 aa10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 LAMC2Q13753 1193 aa10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 RTN1Q16799 776 aa10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 CELF3Q5SZQ8 465 aaKnown RBP10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 MYSM1Q5VVJ2 828 aa10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 NFRKBQ6P4R8 1299 aa10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 KCNV1Q6PIU1 500 aa10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 C16orf59Q7L2K0 433 aa10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 FBXL16Q8N461 479 aa10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 PPP1R13LQ8WUF5 828 aa10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 KAT2BQ92831 832 aa10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 NOC4LQ9BVI4 516 aaKnown RBP10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 USP26Q9BXU7 913 aa10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 PPP1R12CQ9BZL4 782 aa10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 PSTPIP2Q9H939 334 aa10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 TRMT13Q9NUP7 481 aaKnown RBP10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 RBM28Q9NW13 759 aaKnown RBP10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 SCN5AQ14524 2016 aa10.12□□□□□ -0.79
SNRPA1-206ENST00000558059 UMODL1Q5DID0 1318 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 KAT6AQ92794 2004 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 GOLGA8AA7E2F4 631 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 GOLGA8BA8MQT2 603 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 EPB41L2O43491 1005 aaKnown RBP10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 TGFB3P10600 412 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 HOXD8P13378 290 aaPredicted RBP10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 CSF2RAP15509 400 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 CDC27P30260 824 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 ICAM3P32942 547 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 ADD1P35611 737 aaKnown RBP10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 RCAN1P53805 252 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 APOBRQ0VD83 1088 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 SEMA3FQ13275 785 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 TYW1BQ6NUM6 668 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 BLOC1S2Q6QNY1 142 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 Q6ZUG5 572 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 Q7L0L9 218 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 DHX37Q8IY37 1157 aaKnown RBP10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 PPTC7Q8NI37 304 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 SMARCC2Q8TAQ2 1214 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 CUL5Q93034 780 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 INPP4AQ96PE3 977 aaPredicted RBP10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.11□□□□□ -0.792e-8■□□□□ 10.1
SNRPA1-206ENST00000558059 KRTAP3-3Q9BYR6 98 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 KRTAP3-2Q9BYR7 98 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 AGXT2Q9BYV1 514 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 HIPK3Q9H422 1215 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 BCAS3Q9H6U6 928 aa10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 V9GY48 417 aaPredicted RBP10.11□□□□□ -0.79
SNRPA1-206ENST00000558059 POTEB3A0JP26 581 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 SPATA31C2B4DYI2 1134 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 SORBS3O60504 671 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 STAM2O75886 525 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 GGPS1O95749 300 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 SUPT20HL2P0C7V6 817 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 ACRP10323 421 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 CYP2C9P11712 490 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 CASTP20810 708 aaKnown RBP10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 UBA1P22314 1058 aaKnown RBP10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 RPS6KB1P23443 525 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 PTPN11Q06124 597 aaPredicted RBP10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 PPIGQ13427 754 aaKnown RBP eCLIP10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 DGKDQ16760 1214 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 UBE2SQ16763 222 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 HSDL1Q3SXM5 330 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 FAM47CQ5HY64 1035 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 TMEM240Q5SV17 173 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 PCNX4Q63HM2 1172 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 WWC2Q6AWC2 1192 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 XRRA1Q6P2D8 792 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 POTEBQ6S5H4 581 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 HEATR3Q7Z4Q2 680 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 TMEM199Q8N511 208 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 DEFB123Q8N688 67 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 BRF1Q92994 677 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 VWCEQ96DN2 955 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 RNPC3Q96LT9 517 aaKnown RBP10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 WNT8AQ9H1J5 351 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 RTEL1Q9NZ71 1219 aa10.1□□□□□ -0.79
SNRPA1-206ENST00000558059 CHD9Q3L8U1 2897 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 188.9 ms