RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 STK4Q13043 487 aa14.65□□□□□ -0.06
CPNE6-204ENST00000557829 SLC35G1Q2M3R5 365 aa14.65□□□□□ -0.06
CPNE6-204ENST00000557829 LRRC31Q6UY01 552 aa14.65□□□□□ -0.06
CPNE6-204ENST00000557829 HEATR3Q7Z4Q2 680 aa14.65□□□□□ -0.06
CPNE6-204ENST00000557829 ZNF444Q8N0Y2 327 aaPredicted RBP14.65□□□□□ -0.06
CPNE6-204ENST00000557829 LRRC15Q8TF66 581 aa14.65□□□□□ -0.06
CPNE6-204ENST00000557829 DYNLL2Q96FJ2 89 aa14.65□□□□□ -0.06
CPNE6-204ENST00000557829 ZDHHC15Q96MV8 337 aa14.65□□□□□ -0.06
CPNE6-204ENST00000557829 GMLQ99445 158 aa14.65□□□□□ -0.06
CPNE6-204ENST00000557829 MKNK2Q9HBH9 465 aa14.65□□□□□ -0.06
CPNE6-204ENST00000557829 ZNF287Q9HBT7 754 aa14.65□□□□□ -0.06
CPNE6-204ENST00000557829 C6orf50Q9HD87 102 aa14.65□□□□□ -0.06
CPNE6-204ENST00000557829 USP40Q9NVE5 1235 aa14.65□□□□□ -0.06
CPNE6-204ENST00000557829 FAM184BQ9ULE4 1060 aa14.65□□□□□ -0.06
CPNE6-204ENST00000557829 TSPY3P0CV98 308 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 TSPY8P0CW00 308 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 ASIC1P78348 528 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 CXCL9Q07325 125 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 VWA3BQ502W6 1294 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 CCDC84Q86UT8 332 aaPredicted RBP14.64□□□□□ -0.07
CPNE6-204ENST00000557829 CCDC155Q8N6L0 562 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 AENQ8WTP8 325 aaKnown RBP14.64□□□□□ -0.07
CPNE6-204ENST00000557829 CALML4Q96GE6 196 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 PCMTD1Q96MG8 357 aaPredicted RBP14.64□□□□□ -0.07
CPNE6-204ENST00000557829 CRACR2AQ9BSW2 395 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 DDX4Q9NQI0 724 aaKnown RBP14.64□□□□□ -0.07
CPNE6-204ENST00000557829 STK17AQ9UEE5 414 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 ESYT2A0FGR8 921 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 PJA2O43164 708 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 PPFIA4O75335 1185 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 TCP1P17987 556 aaKnown RBP14.64□□□□□ -0.07
CPNE6-204ENST00000557829 NEK8Q86SG6 692 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 CREG2Q8IUH2 290 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 CAPZA3Q96KX2 299 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 TMEM47Q9BQJ4 181 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 SELENOOQ9BVL4 669 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 MRIQ9BWK5 157 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 SH2D4AQ9H788 454 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 PCDHA13Q9Y5I0 950 aa14.64□□□□□ -0.07
CPNE6-204ENST00000557829 LTBP3Q9NS15 1303 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 PDE2AO00408 941 aaPredicted RBP14.63□□□□□ -0.07
CPNE6-204ENST00000557829 CLSTN1O94985 981 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 RBM5P52756 815 aaKnown RBP eCLIP14.63□□□□□ -0.07
CPNE6-204ENST00000557829 HDLBPQ00341 1268 aaKnown RBP14.63□□□□□ -0.07
CPNE6-204ENST00000557829 PICALMQ13492 652 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 MAN2A1Q16706 1144 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 SLC44A5Q8NCS7 719 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 TRERF1Q96PN7 1200 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 LRRC27Q9C0I9 530 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 JADE2Q9NQC1 790 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 SERPINA10Q9UK55 444 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 SIK3Q9Y2K2 1263 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 hCG_1984214I3L0E3 225 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 SHOX2O60902 331 aaPredicted RBP14.63□□□□□ -0.07
CPNE6-204ENST00000557829 TNFRSF8P28908 595 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 KLK7P49862 253 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 CACNB3P54284 484 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 NFIAQ12857 509 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 UNC13DQ70J99 1090 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 SV2BQ7L1I2 683 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 ZNF713Q8N859 430 aaPredicted RBP14.63□□□□□ -0.07
CPNE6-204ENST00000557829 JDP2Q8WYK2 163 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 PLIN2Q99541 437 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 TRIM34Q9BYJ4 488 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 SEMA6BQ9H3T3 888 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 LCMT1Q9UIC8 334 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 TFR2Q9UP52 801 aa14.63□□□□□ -0.07
CPNE6-204ENST00000557829 ZNF263O14978 683 aa14.62□□□□□ -0.07
CPNE6-204ENST00000557829 CCNT1O60563 726 aaKnown RBP14.62□□□□□ -0.07
CPNE6-204ENST00000557829 PHACTR2O75167 634 aa14.62□□□□□ -0.07
CPNE6-204ENST00000557829 NAPAP54920 295 aa14.62□□□□□ -0.07
CPNE6-204ENST00000557829 LRRC63Q05C16 580 aa14.62□□□□□ -0.07
CPNE6-204ENST00000557829 PSMD2Q13200 908 aa14.62□□□□□ -0.07
CPNE6-204ENST00000557829 GUF1Q8N442 669 aaKnown RBP14.62□□□□□ -0.07
CPNE6-204ENST00000557829 KIAA0895Q8NCT3 520 aa14.62□□□□□ -0.07
CPNE6-204ENST00000557829 ALS2CR12Q96Q35 445 aa14.62□□□□□ -0.07
CPNE6-204ENST00000557829 MMTAG2Q9BU76 263 aaKnown RBP14.62□□□□□ -0.07
CPNE6-204ENST00000557829 IFIH1Q9BYX4 1025 aaKnown RBP14.62□□□□□ -0.07
CPNE6-204ENST00000557829 NDST4Q9H3R1 872 aa14.62□□□□□ -0.07
CPNE6-204ENST00000557829 RNF14Q9UBS8 474 aa14.62□□□□□ -0.07
CPNE6-204ENST00000557829 LRWD1Q9UFC0 647 aa14.62□□□□□ -0.07
CPNE6-204ENST00000557829 TSKSQ9UJT2 592 aa14.62□□□□□ -0.07
CPNE6-204ENST00000557829 SMCO2A6NFE2 343 aa14.61□□□□□ -0.07
CPNE6-204ENST00000557829 A6NNZ2 444 aa14.61□□□□□ -0.07
CPNE6-204ENST00000557829 KLRF2D3W0D1 207 aa14.61□□□□□ -0.07
CPNE6-204ENST00000557829 MAPK8IP2Q13387 824 aaPredicted RBP14.61□□□□□ -0.07
CPNE6-204ENST00000557829 CCDC96Q2M329 555 aa14.61□□□□□ -0.07
CPNE6-204ENST00000557829 TUBB8Q3ZCM7 444 aa14.61□□□□□ -0.07
CPNE6-204ENST00000557829 RNF10Q8N5U6 811 aaKnown RBP14.61□□□□□ -0.07
CPNE6-204ENST00000557829 ARHGAP20Q9P2F6 1191 aa14.61□□□□□ -0.07
CPNE6-204ENST00000557829 HYOU1Q9Y4L1 999 aa14.61□□□□□ -0.07
CPNE6-204ENST00000557829 MYH10P35580 1976 aa14.61□□□□□ -0.07
CPNE6-204ENST00000557829 MYO3BQ8WXR4 1341 aa14.61□□□□□ -0.07
CPNE6-204ENST00000557829 MACROD2A1Z1Q3 448 aa14.61□□□□□ -0.07
CPNE6-204ENST00000557829 AGPSO00116 658 aa14.61□□□□□ -0.07
CPNE6-204ENST00000557829 ZNF185O15231 689 aa14.61□□□□□ -0.07
CPNE6-204ENST00000557829 FCER1AP12319 257 aa14.61□□□□□ -0.07
CPNE6-204ENST00000557829 GGCXP38435 758 aa14.61□□□□□ -0.07
CPNE6-204ENST00000557829 MAGEA9P43362 315 aa14.61□□□□□ -0.07
CPNE6-204ENST00000557829 FXR2P51116 673 aaKnown RBP eCLIP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms