RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 DBNLQ9UJU6 430 aaKnown RBP11.27□□□□□ -0.61
NEDD1-211ENST00000557454 RSPH10B2B2RC85 870 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 C2CD4DB7Z1M9 353 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 PRKAB2O43741 272 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 ARIH2O95376 493 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 ITGB1P05556 798 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 ASGR2P07307 311 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 MMP3P08254 477 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 RSPH10BP0C881 870 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 COL9A3Q14050 684 aaPredicted RBP11.26□□□□□ -0.61
NEDD1-211ENST00000557454 CCDC184Q52MB2 194 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 C12orf60Q5U649 245 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 TMED8Q6PL24 325 aaPredicted RBP11.26□□□□□ -0.61
NEDD1-211ENST00000557454 CRIPAKQ8N1N5 446 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 SCFD2Q8WU76 684 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 AFG1LQ8WV93 481 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 RIN2Q8WYP3 895 aaPredicted RBP11.26□□□□□ -0.61
NEDD1-211ENST00000557454 ALG1Q9BT22 464 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 APOL5Q9BWW9 433 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 PLVAPQ9BX97 442 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 OSBPL7Q9BZF2 842 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 RC3H2Q9HBD1 1191 aaKnown RBP11.26□□□□□ -0.61
NEDD1-211ENST00000557454 GPR108Q9NPR9 543 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 NYAP2Q9P242 653 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 ISY1Q9ULR0 285 aaKnown RBP11.26□□□□□ -0.61
NEDD1-211ENST00000557454 LCTP09848 1927 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 FRYQ5TBA9 3013 aa11.26□□□□□ -0.61
NEDD1-211ENST00000557454 PNMA6EA0A0J9YXQ4 647 aa11.25□□□□□ -0.61
NEDD1-211ENST00000557454 PER2O15055 1255 aa11.25□□□□□ -0.61
NEDD1-211ENST00000557454 ZZEF1O43149 2961 aa11.25□□□□□ -0.61
NEDD1-211ENST00000557454 TXNP10599 105 aaKnown RBP11.25□□□□□ -0.61
NEDD1-211ENST00000557454 PDE6AP16499 860 aa11.25□□□□□ -0.61
NEDD1-211ENST00000557454 NPR3P17342 541 aa11.25□□□□□ -0.61
NEDD1-211ENST00000557454 SDHBP21912 280 aa11.25□□□□□ -0.61
NEDD1-211ENST00000557454 THPOP40225 353 aa11.25□□□□□ -0.61
NEDD1-211ENST00000557454 SNAP25P60880 206 aa11.25□□□□□ -0.61
NEDD1-211ENST00000557454 DMWDQ09019 674 aa11.25□□□□□ -0.61
NEDD1-211ENST00000557454 SPPL3Q8TCT6 385 aa11.25□□□□□ -0.61
NEDD1-211ENST00000557454 NEK1Q96PY6 1258 aa11.25□□□□□ -0.61
NEDD1-211ENST00000557454 TLE6Q9H808 572 aa11.25□□□□□ -0.61
NEDD1-211ENST00000557454 ARMT1Q9H993 441 aa11.25□□□□□ -0.61
NEDD1-211ENST00000557454 ADD3Q9UEY8 706 aaKnown RBP11.25□□□□□ -0.61
NEDD1-211ENST00000557454 CDH22Q9UJ99 828 aa11.25□□□□□ -0.61
NEDD1-211ENST00000557454 CDV3Q9UKY7 258 aaKnown RBP11.25□□□□□ -0.61
NEDD1-211ENST00000557454 NR2E1Q9Y466 385 aa11.25□□□□□ -0.61
NEDD1-211ENST00000557454 CEP295Q9C0D2 2601 aa11.24□□□□□ -0.61
NEDD1-211ENST00000557454 TMEM232C9JQI7 657 aa11.24□□□□□ -0.61
NEDD1-211ENST00000557454 FDX1P10109 184 aa11.24□□□□□ -0.61
NEDD1-211ENST00000557454 PSEN2P49810 448 aa11.24□□□□□ -0.61
NEDD1-211ENST00000557454 BAATQ14032 418 aaPredicted RBP11.24□□□□□ -0.61
NEDD1-211ENST00000557454 BTG3Q14201 252 aaPredicted RBP11.24□□□□□ -0.61
NEDD1-211ENST00000557454 HIC1Q14526 733 aa11.24□□□□□ -0.61
NEDD1-211ENST00000557454 SLC9C2Q5TAH2 1124 aa11.24□□□□□ -0.61
NEDD1-211ENST00000557454 ATP8B4Q8TF62 1192 aa11.24□□□□□ -0.61
NEDD1-211ENST00000557454 POF1BQ8WVV4 589 aa11.24□□□□□ -0.61
NEDD1-211ENST00000557454 S1PR5Q9H228 398 aa11.24□□□□□ -0.61
NEDD1-211ENST00000557454 CLIP2Q9UDT6 1046 aa11.24□□□□□ -0.61
NEDD1-211ENST00000557454 ZNF532Q9HCE3 1301 aa11.24□□□□□ -0.61
NEDD1-211ENST00000557454 MAST4O15021 2626 aa11.23□□□□□ -0.61
NEDD1-211ENST00000557454 CTSHP09668 335 aa11.23□□□□□ -0.61
NEDD1-211ENST00000557454 BMP3P12645 472 aa11.23□□□□□ -0.61
NEDD1-211ENST00000557454 STAT2P52630 851 aa11.23□□□□□ -0.61
NEDD1-211ENST00000557454 PDE4DQ08499 809 aa11.23□□□□□ -0.61
NEDD1-211ENST00000557454 IKQ13123 557 aaPredicted RBP11.23□□□□□ -0.61
NEDD1-211ENST00000557454 ZC3H14Q6PJT7 736 aaKnown RBP11.23□□□□□ -0.61
NEDD1-211ENST00000557454 AMOTL1Q8IY63 956 aa11.23□□□□□ -0.61
NEDD1-211ENST00000557454 KLHL23Q8NBE8 558 aa11.23□□□□□ -0.61
NEDD1-211ENST00000557454 P2RX5Q93086 422 aa11.23□□□□□ -0.61
NEDD1-211ENST00000557454 RTP3Q9BQQ7 232 aa11.23□□□□□ -0.61
NEDD1-211ENST00000557454 CCDC8Q9H0W5 538 aaPredicted RBP11.23□□□□□ -0.61
NEDD1-211ENST00000557454 MRPL42Q9Y6G3 142 aaKnown RBP11.23□□□□□ -0.61
NEDD1-211ENST00000557454 GREB1LQ9C091 1923 aaPredicted RBP11.23□□□□□ -0.61
NEDD1-211ENST00000557454 ZNF286BP0CG31 522 aa11.22□□□□□ -0.61
NEDD1-211ENST00000557454 CASTP20810 708 aaKnown RBP11.22□□□□□ -0.61
NEDD1-211ENST00000557454 ARHGAP1Q07960 439 aa11.22□□□□□ -0.61
NEDD1-211ENST00000557454 OS9Q13438 667 aaPredicted RBP11.22□□□□□ -0.61
NEDD1-211ENST00000557454 MFSD10Q14728 455 aa11.22□□□□□ -0.61
NEDD1-211ENST00000557454 KIAA0753Q2KHM9 967 aa11.22□□□□□ -0.61
NEDD1-211ENST00000557454 SLFN13Q68D06 897 aa11.22□□□□□ -0.61
NEDD1-211ENST00000557454 SYCE2Q6PIF2 218 aa11.22□□□□□ -0.61
NEDD1-211ENST00000557454 SLC30A10Q6XR72 485 aa11.22□□□□□ -0.61
NEDD1-211ENST00000557454 CHST3Q7LGC8 479 aa11.22□□□□□ -0.61
NEDD1-211ENST00000557454 RPAP2Q8IXW5 612 aaPredicted RBP11.22□□□□□ -0.61
NEDD1-211ENST00000557454 DHX37Q8IY37 1157 aaKnown RBP11.22□□□□□ -0.61
NEDD1-211ENST00000557454 SUMF1Q8NBK3 374 aa11.22□□□□□ -0.61
NEDD1-211ENST00000557454 CHMP4CQ96CF2 233 aa11.22□□□□□ -0.61
NEDD1-211ENST00000557454 RTKNQ9BST9 563 aa11.22□□□□□ -0.61
NEDD1-211ENST00000557454 ATP8A2Q9NTI2 1148 aa11.22□□□□□ -0.61
NEDD1-211ENST00000557454 CCPG1Q9ULG6 757 aa11.22□□□□□ -0.61
NEDD1-211ENST00000557454 LOC102724159A0A0B4J2E5 919 aa11.21□□□□□ -0.61
NEDD1-211ENST00000557454 TCRBV5S4A2TA0A5A2 114 aa11.21□□□□□ -0.61
NEDD1-211ENST00000557454 PTPDC1A2A3K4 754 aa11.21□□□□□ -0.61
NEDD1-211ENST00000557454 NFIBO00712 420 aa11.21□□□□□ -0.61
NEDD1-211ENST00000557454 MBD4O95243 580 aa11.21□□□□□ -0.61
NEDD1-211ENST00000557454 RASA1P20936 1047 aa11.21□□□□□ -0.61
NEDD1-211ENST00000557454 TECP42680 631 aa11.21□□□□□ -0.61
NEDD1-211ENST00000557454 PWP2Q15269 919 aaKnown RBP11.21□□□□□ -0.61
NEDD1-211ENST00000557454 DUSP6Q16828 381 aa11.21□□□□□ -0.61
NEDD1-211ENST00000557454 ANKRD54Q6NXT1 300 aa11.21□□□□□ -0.61
NEDD1-211ENST00000557454 SERINC5Q86VE9 423 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms