RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 EIF2AK2P19525 551 aaKnown RBP13.02□□□□□ -0.33
HNRNPC-231ENST00000557336 FOXK1P85037 733 aa13.02□□□□□ -0.33
HNRNPC-231ENST00000557336 PTH1RQ03431 593 aa13.02□□□□□ -0.33
HNRNPC-231ENST00000557336 STXBP2Q15833 593 aa13.02□□□□□ -0.33
HNRNPC-231ENST00000557336 TRAF7Q6Q0C0 670 aa13.02□□□□□ -0.33
HNRNPC-231ENST00000557336 IL31RAQ8NI17 732 aa13.02□□□□□ -0.33
HNRNPC-231ENST00000557336 WNT8BQ93098 351 aa13.02□□□□□ -0.33
HNRNPC-231ENST00000557336 EMID1Q96A84 441 aaPredicted RBP13.02□□□□□ -0.33
HNRNPC-231ENST00000557336 MPHOSPH6Q99547 160 aaKnown RBP13.02□□□□□ -0.33
HNRNPC-231ENST00000557336 KRT23Q9C075 422 aa13.02□□□□□ -0.33
HNRNPC-231ENST00000557336 CTNNA3Q9UI47 895 aa13.02□□□□□ -0.33
HNRNPC-231ENST00000557336 MRPL11Q9Y3B7 192 aaKnown RBP13.02□□□□□ -0.33
HNRNPC-231ENST00000557336 B4DLN1 442 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 HAS3O00219 553 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 CYTH3O43739 400 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 EIF3JO75822 258 aaKnown RBP13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 CFBP00751 764 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 CA3P07451 260 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 CYP21A2P08686 494 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 HOXD8P13378 290 aaPredicted RBP13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 IGFBP4P22692 258 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 RFC2P35250 354 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 MRPL12P52815 198 aaKnown RBP13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 RBL2Q08999 1139 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 PTGISQ16647 500 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 TRIM71Q2Q1W2 868 aaKnown RBP13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 BRDTQ58F21 947 aaPredicted RBP13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 PPP2R2DQ66LE6 453 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 STOX1Q6ZVD7 989 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 CHST3Q7LGC8 479 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 MCF2L2Q86YR7 1114 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 PLPP6Q8IY26 295 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 ATXN2LQ8WWM7 1075 aaKnown RBP13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 ASB2Q96Q27 587 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 PDCD2LQ9BRP1 358 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 BCAS3Q9H6U6 928 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 CNNM2Q9H8M5 875 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 RAD50Q92878 1312 aa13.01□□□□□ -0.33
HNRNPC-231ENST00000557336 POU3F3P20264 500 aaPredicted RBP13□□□□□ -0.33
HNRNPC-231ENST00000557336 CHMP4BP1P59074 171 aa13□□□□□ -0.33
HNRNPC-231ENST00000557336 SP2Q02086 613 aa13□□□□□ -0.33
HNRNPC-231ENST00000557336 TAP1Q03518 808 aa13□□□□□ -0.33
HNRNPC-231ENST00000557336 COL9A3Q14050 684 aaPredicted RBP13□□□□□ -0.33
HNRNPC-231ENST00000557336 IFIT1BQ5T764 474 aaKnown RBP13□□□□□ -0.33
HNRNPC-231ENST00000557336 TTC22Q5TAA0 569 aa13□□□□□ -0.33
HNRNPC-231ENST00000557336 ARHGEF16Q5VV41 709 aa13□□□□□ -0.33
HNRNPC-231ENST00000557336 VSIG10LQ86VR7 867 aa13□□□□□ -0.33
HNRNPC-231ENST00000557336 HERC6Q8IVU3 1022 aa13□□□□□ -0.33
HNRNPC-231ENST00000557336 SYMPKQ92797 1274 aaKnown RBP13□□□□□ -0.33
HNRNPC-231ENST00000557336 GPKOWQ92917 476 aaPredicted RBP eCLIP13□□□□□ -0.33
HNRNPC-231ENST00000557336 UBAC1Q9BSL1 405 aa13□□□□□ -0.33
HNRNPC-231ENST00000557336 AMNQ9BXJ7 453 aa13□□□□□ -0.33
HNRNPC-231ENST00000557336 RIOX1Q9H6W3 641 aa13□□□□□ -0.33
HNRNPC-231ENST00000557336 HDAC6Q9UBN7 1215 aa13□□□□□ -0.33
HNRNPC-231ENST00000557336 GTF2IRD1Q9UHL9 959 aa13□□□□□ -0.33
HNRNPC-231ENST00000557336 ZBTB5O15062 677 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 DHX16O60231 1041 aaKnown RBP12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 NBNO60934 754 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 F2P00734 622 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 CXCL10P02778 98 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 CASTP20810 708 aaKnown RBP12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 CHMLP26374 656 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 HOXA13P31271 388 aaPredicted RBP12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 PSEN2P49810 448 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 ZNF200P98182 395 aaPredicted RBP12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 TROAPQ12815 778 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 BFSP2Q13515 415 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 MBTPS1Q14703 1052 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 HSDL1Q3SXM5 330 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 TMEM67Q5HYA8 995 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 MYSM1Q5VVJ2 828 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 KRT40Q6A162 431 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 TMCO2Q7Z6W1 182 aaPredicted RBP12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 RETREG2Q8NC44 543 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 PHOSPHO2Q8TCD6 241 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 PIGSQ96S52 555 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 CERS4Q9HA82 394 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 THEGQ9P2T0 379 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 PCDHA1Q9Y5I3 950 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 MTCH2Q9Y6C9 303 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 KIAA1217Q5T5P2 1943 aa12.99□□□□□ -0.33
HNRNPC-231ENST00000557336 BAZ2BQ9UIF8 2168 aaKnown RBP12.98□□□□□ -0.33
HNRNPC-231ENST00000557336 TRIP12Q14669 1992 aaPredicted RBP12.98□□□□□ -0.33
HNRNPC-231ENST00000557336 TANC1Q9C0D5 1861 aa12.98□□□□□ -0.33
HNRNPC-231ENST00000557336 LCHNA4D1U4 455 aa12.98□□□□□ -0.33
HNRNPC-231ENST00000557336 ZNF286BP0CG31 522 aa12.98□□□□□ -0.33
HNRNPC-231ENST00000557336 CKBP12277 381 aa12.98□□□□□ -0.33
HNRNPC-231ENST00000557336 SELPP16109 830 aa12.98□□□□□ -0.33
HNRNPC-231ENST00000557336 ANTXR2P58335 489 aa12.98□□□□□ -0.33
HNRNPC-231ENST00000557336 LAMC2Q13753 1193 aa12.98□□□□□ -0.33
HNRNPC-231ENST00000557336 GRM4Q14833 912 aa12.98□□□□□ -0.33
HNRNPC-231ENST00000557336 PGM5Q15124 567 aa12.98□□□□□ -0.33
HNRNPC-231ENST00000557336 DGKDQ16760 1214 aa12.98□□□□□ -0.33
HNRNPC-231ENST00000557336 PPTC7Q8NI37 304 aa12.98□□□□□ -0.33
HNRNPC-231ENST00000557336 CAGE1Q8TC20 777 aa12.98□□□□□ -0.33
HNRNPC-231ENST00000557336 AFAP1L1Q8TED9 768 aa12.98□□□□□ -0.33
HNRNPC-231ENST00000557336 KHSRPQ92945 711 aaKnown RBP eCLIP12.98□□□□□ -0.331e-9■■□□□ 12.1
HNRNPC-231ENST00000557336 SLC9A7Q96T83 725 aa12.98□□□□□ -0.33
HNRNPC-231ENST00000557336 FTOQ9C0B1 505 aaKnown RBP eCLIP12.98□□□□□ -0.33
HNRNPC-231ENST00000557336 MRVI1Q9Y6F6 885 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms