RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 USP17L20D6RJB6 530 aa25.07■■□□□ 1.6
RCCD1-208ENST00000557266 MARCH6O60337 910 aa25.07■■□□□ 1.6
RCCD1-208ENST00000557266 ERCC3P19447 782 aa25.07■■□□□ 1.6
RCCD1-208ENST00000557266 USP17L24Q0WX57 530 aa25.07■■□□□ 1.6
RCCD1-208ENST00000557266 QRICH1Q2TAL8 776 aa25.07■■□□□ 1.6
RCCD1-208ENST00000557266 WDR93Q6P2C0 686 aa25.07■■□□□ 1.6
RCCD1-208ENST00000557266 USP17L6PQ6QN14 398 aa25.07■■□□□ 1.6
RCCD1-208ENST00000557266 MYOCDQ8IZQ8 938 aa25.07■■□□□ 1.6
RCCD1-208ENST00000557266 CCDC17Q96LX7 622 aa25.07■■□□□ 1.6
RCCD1-208ENST00000557266 STK32BQ9NY57 414 aa25.07■■□□□ 1.6
RCCD1-208ENST00000557266 ZKSCAN7Q9P0L1 754 aaPredicted RBP25.07■■□□□ 1.6
RCCD1-208ENST00000557266 MYH4Q9Y623 1939 aa25.07■■□□□ 1.6
RCCD1-208ENST00000557266 TUBBP07437 444 aa25.07■■□□□ 1.6
RCCD1-208ENST00000557266 CRKP46108 304 aa25.07■■□□□ 1.6
RCCD1-208ENST00000557266 KIF5AQ12840 1032 aa25.07■■□□□ 1.6
RCCD1-208ENST00000557266 SEPT2Q15019 361 aa25.07■■□□□ 1.6
RCCD1-208ENST00000557266 TSG101Q99816 390 aa25.07■■□□□ 1.6
RCCD1-208ENST00000557266 ANO9A1A5B4 782 aa25.06■■□□□ 1.6
RCCD1-208ENST00000557266 SPA17Q15506 151 aa25.06■■□□□ 1.6
RCCD1-208ENST00000557266 BAP1Q92560 729 aa25.06■■□□□ 1.6
RCCD1-208ENST00000557266 UIMC1Q96RL1 719 aa25.06■■□□□ 1.6
RCCD1-208ENST00000557266 TSGA10Q9BZW7 698 aa25.06■■□□□ 1.6
RCCD1-208ENST00000557266 PANK4Q9NVE7 773 aa25.06■■□□□ 1.6
RCCD1-208ENST00000557266 KDM3AQ9Y4C1 1321 aa25.06■■□□□ 1.6
RCCD1-208ENST00000557266 LRRC53A6NM62 1247 aa25.06■■□□□ 1.6
RCCD1-208ENST00000557266 FAM196BA6NMK8 535 aa25.06■■□□□ 1.6
RCCD1-208ENST00000557266 CACNB3P54284 484 aa25.06■■□□□ 1.6
RCCD1-208ENST00000557266 FAM26FQ5R3K3 315 aa25.06■■□□□ 1.6
RCCD1-208ENST00000557266 DEFB132Q7Z7B7 95 aa25.06■■□□□ 1.6
RCCD1-208ENST00000557266 SECISBP2LQ93073 1101 aaKnown RBP25.06■■□□□ 1.6
RCCD1-208ENST00000557266 CAPZA3Q96KX2 299 aa25.06■■□□□ 1.6
RCCD1-208ENST00000557266 FGFBP2Q9BYJ0 223 aa25.06■■□□□ 1.6
RCCD1-208ENST00000557266 KCNQ5Q9NR82 932 aa25.06■■□□□ 1.6
RCCD1-208ENST00000557266 PCDHAC2Q9Y5I4 1007 aa25.06■■□□□ 1.6
RCCD1-208ENST00000557266 E9PMD0 336 aa25.05■■□□□ 1.6
RCCD1-208ENST00000557266 KIF11P52732 1056 aa25.05■■□□□ 1.6
RCCD1-208ENST00000557266 USP14P54578 494 aa25.05■■□□□ 1.6
RCCD1-208ENST00000557266 MSL3Q8N5Y2 521 aaKnown RBP25.05■■□□□ 1.6
RCCD1-208ENST00000557266 ZDHHC15Q96MV8 337 aa25.05■■□□□ 1.6
RCCD1-208ENST00000557266 NAP1L4Q99733 375 aaKnown RBP25.05■■□□□ 1.6
RCCD1-208ENST00000557266 IFIH1Q9BYX4 1025 aaKnown RBP25.05■■□□□ 1.6
RCCD1-208ENST00000557266 NT5C3AQ9H0P0 336 aa25.05■■□□□ 1.6
RCCD1-208ENST00000557266 GBP3Q9H0R5 595 aa25.05■■□□□ 1.6
RCCD1-208ENST00000557266 PDE11AQ9HCR9 933 aa25.05■■□□□ 1.6
RCCD1-208ENST00000557266 KCNMB3Q9NPA1 279 aa25.05■■□□□ 1.6
RCCD1-208ENST00000557266 PCDHA13Q9Y5I0 950 aa25.05■■□□□ 1.6
RCCD1-208ENST00000557266 ERICH4A6NGS2 130 aa25.04■■□□□ 1.6
RCCD1-208ENST00000557266 LCA5LO95447 670 aa25.04■■□□□ 1.6
RCCD1-208ENST00000557266 SSBP05455 408 aaKnown RBP eCLIP25.04■■□□□ 1.6
RCCD1-208ENST00000557266 EEF2P13639 858 aaKnown RBP25.04■■□□□ 1.6
RCCD1-208ENST00000557266 EIF4A3P38919 411 aaKnown RBP25.04■■□□□ 1.6
RCCD1-208ENST00000557266 RRAGAQ7L523 313 aa25.04■■□□□ 1.6
RCCD1-208ENST00000557266 CCDC155Q8N6L0 562 aa25.04■■□□□ 1.6
RCCD1-208ENST00000557266 KIAA1024Q9UPX6 916 aa25.04■■□□□ 1.6
RCCD1-208ENST00000557266 PCDHA1Q9Y5I3 950 aa25.04■■□□□ 1.6
RCCD1-208ENST00000557266 ARFGEF1Q9Y6D6 1849 aa25.04■■□□□ 1.6
RCCD1-208ENST00000557266 G3V3G9 751 aa25.04■■□□□ 1.6
RCCD1-208ENST00000557266 RAD21O60216 631 aa25.04■■□□□ 1.6
RCCD1-208ENST00000557266 SLC1A4P43007 532 aa25.04■■□□□ 1.6
RCCD1-208ENST00000557266 DCAF8Q5TAQ9 597 aa25.04■■□□□ 1.6
RCCD1-208ENST00000557266 SMCR8Q8TEV9 937 aaPredicted RBP25.04■■□□□ 1.6
RCCD1-208ENST00000557266 MKL1Q969V6 931 aa25.04■■□□□ 1.6
RCCD1-208ENST00000557266 PCDHA2Q9Y5H9 948 aa25.04■■□□□ 1.6
RCCD1-208ENST00000557266 SIPA1L1O43166 1804 aa25.03■■□□□ 1.6
RCCD1-208ENST00000557266 POTEB3A0JP26 581 aa25.03■■□□□ 1.6
RCCD1-208ENST00000557266 POTECB2RU33 542 aa25.03■■□□□ 1.6
RCCD1-208ENST00000557266 ZNF185O15231 689 aa25.03■■□□□ 1.6
RCCD1-208ENST00000557266 FKBP3Q00688 224 aaKnown RBP25.03■■□□□ 1.6
RCCD1-208ENST00000557266 CKAP4Q07065 602 aaKnown RBP25.03■■□□□ 1.6
RCCD1-208ENST00000557266 TCP10Q12799 353 aa25.03■■□□□ 1.6
RCCD1-208ENST00000557266 CDC37Q16543 378 aaPredicted RBP25.03■■□□□ 1.6
RCCD1-208ENST00000557266 POTEBQ6S5H4 581 aa25.03■■□□□ 1.6
RCCD1-208ENST00000557266 GPIHBP1Q8IV16 184 aa25.03■■□□□ 1.6
RCCD1-208ENST00000557266 ANO3Q9BYT9 981 aa25.03■■□□□ 1.6
RCCD1-208ENST00000557266 GLT8D2Q9H1C3 349 aa25.03■■□□□ 1.6
RCCD1-208ENST00000557266 SH2D4AQ9H788 454 aa25.03■■□□□ 1.6
RCCD1-208ENST00000557266 DBNDD1Q9H9R9 158 aa25.03■■□□□ 1.6
RCCD1-208ENST00000557266 RNF216Q9NWF9 866 aaPredicted RBP25.03■■□□□ 1.6
RCCD1-208ENST00000557266 COL4A3BPQ9Y5P4 624 aa25.03■■□□□ 1.6
RCCD1-208ENST00000557266 DDTLA6NHG4 134 aaPredicted RBP25.03■■□□□ 1.6
RCCD1-208ENST00000557266 PLA2G4BP0C869 781 aa25.03■■□□□ 1.6
RCCD1-208ENST00000557266 KCNMA1Q12791 1236 aa25.03■■□□□ 1.6
RCCD1-208ENST00000557266 DCAF4Q8WV16 495 aa25.03■■□□□ 1.6
RCCD1-208ENST00000557266 TBC1D7Q9P0N9 293 aa25.03■■□□□ 1.6
RCCD1-208ENST00000557266 CAPN6Q9Y6Q1 641 aa25.03■■□□□ 1.6
RCCD1-208ENST00000557266 CYP3A7-CYP3A51PA0A087WV96 503 aa25.02■■□□□ 1.6
RCCD1-208ENST00000557266 NPHP3-ACAD11A0A0J9YXS1 232 aa25.02■■□□□ 1.6
RCCD1-208ENST00000557266 PDE2AO00408 941 aaPredicted RBP25.02■■□□□ 1.6
RCCD1-208ENST00000557266 MMP10P09238 476 aa25.02■■□□□ 1.6
RCCD1-208ENST00000557266 CYP3A7P24462 503 aa25.02■■□□□ 1.6
RCCD1-208ENST00000557266 ALDH1B1P30837 517 aa25.02■■□□□ 1.6
RCCD1-208ENST00000557266 USP11P51784 963 aa25.02■■□□□ 1.6
RCCD1-208ENST00000557266 CASP8Q14790 479 aa25.02■■□□□ 1.6
RCCD1-208ENST00000557266 SLFN13Q68D06 897 aa25.02■■□□□ 1.6
RCCD1-208ENST00000557266 PDXDC1Q6P996 788 aa25.02■■□□□ 1.6
RCCD1-208ENST00000557266 RPGRIP1Q96KN7 1286 aa25.02■■□□□ 1.6
RCCD1-208ENST00000557266 MBOAT7Q96N66 472 aa25.02■■□□□ 1.6
RCCD1-208ENST00000557266 BMP2KQ9NSY1 1161 aaPredicted RBP25.02■■□□□ 1.6
RCCD1-208ENST00000557266 NYAP2Q9P242 653 aa25.02■■□□□ 1.6
RCCD1-208ENST00000557266 TRAF5O00463 557 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms