RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ITPRIPQ8IWB1 547 aa5.58□□□□□ -1.52
SRP54-212ENST00000556992 TSPYL6Q8N831 410 aa5.58□□□□□ -1.52
SRP54-212ENST00000556992 SYTL5Q8TDW5 730 aaPredicted RBP5.58□□□□□ -1.52
SRP54-212ENST00000556992 NOC4LQ9BVI4 516 aaKnown RBP5.58□□□□□ -1.52
SRP54-212ENST00000556992 TSPYL4Q9UJ04 414 aa5.58□□□□□ -1.52
SRP54-212ENST00000556992 DCCP43146 1447 aa5.57□□□□□ -1.52
SRP54-212ENST00000556992 SSU72P8A0A1W2PR75 194 aa5.57□□□□□ -1.52
SRP54-212ENST00000556992 GBP2P32456 591 aaPredicted RBP5.57□□□□□ -1.52
SRP54-212ENST00000556992 CHMP4BP1P59074 171 aa5.57□□□□□ -1.52
SRP54-212ENST00000556992 PSMD2Q13200 908 aa5.57□□□□□ -1.52
SRP54-212ENST00000556992 ARSHQ5FYA8 562 aa5.57□□□□□ -1.52
SRP54-212ENST00000556992 CNKSR3Q6P9H4 555 aa5.57□□□□□ -1.52
SRP54-212ENST00000556992 TMC6Q7Z403 805 aa5.57□□□□□ -1.52
SRP54-212ENST00000556992 TMEM57Q8N5G2 664 aa5.57□□□□□ -1.52
SRP54-212ENST00000556992 GOLM1Q8NBJ4 401 aa5.57□□□□□ -1.52
SRP54-212ENST00000556992 IL17REQ8NFR9 667 aa5.57□□□□□ -1.52
SRP54-212ENST00000556992 CXorf38Q8TB03 319 aa5.57□□□□□ -1.52
SRP54-212ENST00000556992 MZB1Q8WU39 189 aa5.57□□□□□ -1.52
SRP54-212ENST00000556992 RHOVQ96L33 236 aa5.57□□□□□ -1.52
SRP54-212ENST00000556992 ZBTB40Q9NUA8 1239 aa5.57□□□□□ -1.52
SRP54-212ENST00000556992 GPR55Q9Y2T6 319 aaPredicted RBP5.57□□□□□ -1.52
SRP54-212ENST00000556992 LRRC7Q96NW7 1537 aa5.57□□□□□ -1.52
SRP54-212ENST00000556992 XRN1Q8IZH2 1706 aaKnown RBP5.57□□□□□ -1.52
SRP54-212ENST00000556992 MST1RQ04912 1400 aa5.57□□□□□ -1.52
SRP54-212ENST00000556992 PTPRCP08575 1304 aa5.56□□□□□ -1.52
SRP54-212ENST00000556992 SPATA31A3Q5VYP0 1347 aa5.56□□□□□ -1.52
SRP54-212ENST00000556992 NUDT19A8MXV4 375 aa5.56□□□□□ -1.52
SRP54-212ENST00000556992 IRS4O14654 1257 aaPredicted RBP5.56□□□□□ -1.52
SRP54-212ENST00000556992 PRAMEF1O95521 474 aa5.56□□□□□ -1.52
SRP54-212ENST00000556992 CELA3BP08861 270 aa5.56□□□□□ -1.52
SRP54-212ENST00000556992 PCBP3P57721 371 aaKnown RBP5.56□□□□□ -1.52
SRP54-212ENST00000556992 RTP1P59025 263 aa5.56□□□□□ -1.52
SRP54-212ENST00000556992 ZC3H6P61129 1189 aaKnown RBP5.56□□□□□ -1.52
SRP54-212ENST00000556992 C1orf141Q5JVX7 400 aa5.56□□□□□ -1.52
SRP54-212ENST00000556992 SNAP47Q5SQN1 464 aa5.56□□□□□ -1.52
SRP54-212ENST00000556992 CCDC30Q5VVM6 783 aa5.56□□□□□ -1.52
SRP54-212ENST00000556992 INTS3Q68E01 1043 aaKnown RBP5.56□□□□□ -1.52
SRP54-212ENST00000556992 BRINP3Q76B58 766 aa5.56□□□□□ -1.52
SRP54-212ENST00000556992 CCDC84Q86UT8 332 aaPredicted RBP5.56□□□□□ -1.52
SRP54-212ENST00000556992 FAM129CQ86XR2 697 aa5.56□□□□□ -1.52
SRP54-212ENST00000556992 IGDCC3Q8IVU1 814 aa5.56□□□□□ -1.52
SRP54-212ENST00000556992 RAPGEF4Q8WZA2 1011 aa5.56□□□□□ -1.52
SRP54-212ENST00000556992 STK31Q9BXU1 1019 aa5.56□□□□□ -1.52
SRP54-212ENST00000556992 BACH2Q9BYV9 841 aa5.56□□□□□ -1.52
SRP54-212ENST00000556992 CRTAC1Q9NQ79 661 aa5.56□□□□□ -1.52
SRP54-212ENST00000556992 MIS18AQ9NYP9 233 aa5.56□□□□□ -1.52
SRP54-212ENST00000556992 KLHL14Q9P2G3 628 aa5.56□□□□□ -1.52
SRP54-212ENST00000556992 CRB1P82279 1406 aa5.56□□□□□ -1.52
SRP54-212ENST00000556992 MAP3K5Q99683 1374 aa5.55□□□□□ -1.52
SRP54-212ENST00000556992 RGS13O14921 159 aa5.55□□□□□ -1.52
SRP54-212ENST00000556992 KIR2DL1P43626 348 aaPredicted RBP5.55□□□□□ -1.52
SRP54-212ENST00000556992 KIR2DL2P43627 348 aaPredicted RBP5.55□□□□□ -1.52
SRP54-212ENST00000556992 ST13P50502 369 aaKnown RBP5.55□□□□□ -1.52
SRP54-212ENST00000556992 DAB2P98082 770 aa5.55□□□□□ -1.52
SRP54-212ENST00000556992 TEFQ10587 303 aa5.55□□□□□ -1.52
SRP54-212ENST00000556992 NBPF9Q3BBW0 867 aa5.55□□□□□ -1.52
SRP54-212ENST00000556992 HSF5Q4G112 596 aaPredicted RBP5.55□□□□□ -1.52
SRP54-212ENST00000556992 ZNF530Q6P9A1 599 aaPredicted RBP5.55□□□□□ -1.52
SRP54-212ENST00000556992 REC114Q7Z4M0 266 aa5.55□□□□□ -1.52
SRP54-212ENST00000556992 LDHDQ86WU2 507 aa5.55□□□□□ -1.52
SRP54-212ENST00000556992 DAGLBQ8NCG7 672 aa5.55□□□□□ -1.52
SRP54-212ENST00000556992 LRRC59Q96AG4 307 aaKnown RBP5.55□□□□□ -1.52
SRP54-212ENST00000556992 PWWP2AQ96N64 755 aa5.55□□□□□ -1.52
SRP54-212ENST00000556992 TNNQ9UQP3 1299 aa5.55□□□□□ -1.52
SRP54-212ENST00000556992 SHPRHQ149N8 1683 aa5.55□□□□□ -1.52
SRP54-212ENST00000556992 HOXB7P09629 217 aa5.54□□□□□ -1.52
SRP54-212ENST00000556992 RAG1P15918 1043 aa5.54□□□□□ -1.52
SRP54-212ENST00000556992 PNLIPP16233 465 aa5.54□□□□□ -1.52
SRP54-212ENST00000556992 ANP32AP39687 249 aaKnown RBP5.54□□□□□ -1.52
SRP54-212ENST00000556992 CCT4P50991 539 aaKnown RBP5.54□□□□□ -1.52
SRP54-212ENST00000556992 YBX1P67809 324 aaKnown RBP5.54□□□□□ -1.52
SRP54-212ENST00000556992 KCNA1Q09470 495 aa5.54□□□□□ -1.52
SRP54-212ENST00000556992 RAB3GAP1Q15042 981 aa5.54□□□□□ -1.52
SRP54-212ENST00000556992 NBPF12Q5TAG4 269 aaPredicted RBP5.54□□□□□ -1.52
SRP54-212ENST00000556992 RPAP2Q8IXW5 612 aaPredicted RBP5.54□□□□□ -1.52
SRP54-212ENST00000556992 ADGRG2Q8IZP9 1017 aa5.54□□□□□ -1.52
SRP54-212ENST00000556992 TP53I13Q8NBR0 393 aaPredicted RBP5.54□□□□□ -1.52
SRP54-212ENST00000556992 ENOX1Q8TC92 643 aaKnown RBP5.54□□□□□ -1.52
SRP54-212ENST00000556992 GCC1Q96CN9 775 aa5.54□□□□□ -1.52
SRP54-212ENST00000556992 TMEM74Q96NL1 305 aa5.54□□□□□ -1.52
SRP54-212ENST00000556992 PRDM14Q9GZV8 571 aa5.54□□□□□ -1.52
SRP54-212ENST00000556992 ZNF142P52746 1687 aaPredicted RBP5.53□□□□□ -1.52
SRP54-212ENST00000556992 ABCC4O15439 1325 aa5.53□□□□□ -1.52
SRP54-212ENST00000556992 FADS2P1A8MWK0 482 aa5.53□□□□□ -1.52
SRP54-212ENST00000556992 RNMTO43148 476 aaKnown RBP5.53□□□□□ -1.52
SRP54-212ENST00000556992 HSP90AB1P08238 724 aaKnown RBP5.53□□□□□ -1.52
SRP54-212ENST00000556992 PRKCAP17252 672 aa5.53□□□□□ -1.52
SRP54-212ENST00000556992 GARTP22102 1010 aa5.53□□□□□ -1.52
SRP54-212ENST00000556992 LIMS1P48059 325 aa5.53□□□□□ -1.52
SRP54-212ENST00000556992 RGS3P49796 1198 aa5.53□□□□□ -1.52
SRP54-212ENST00000556992 EIF4A1P60842 406 aaKnown RBP5.53□□□□□ -1.52
SRP54-212ENST00000556992 TAGLNQ01995 201 aaKnown RBP5.53□□□□□ -1.52
SRP54-212ENST00000556992 OVOS1Q6IE37 1185 aa5.53□□□□□ -1.52
SRP54-212ENST00000556992 DBX2Q6ZNG2 339 aa5.53□□□□□ -1.52
SRP54-212ENST00000556992 RELL1Q8IUW5 271 aa5.53□□□□□ -1.52
SRP54-212ENST00000556992 SMC5Q8IY18 1101 aa5.53□□□□□ -1.52
SRP54-212ENST00000556992 ZNF655Q8N720 491 aaPredicted RBP5.53□□□□□ -1.52
SRP54-212ENST00000556992 LINC00116Q8NCU8 138 aa5.53□□□□□ -1.52
SRP54-212ENST00000556992 DDX17Q92841 729 aaKnown RBP5.53□□□□□ -1.52
SRP54-212ENST00000556992 BDH2Q9BUT1 245 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms