RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 PRR13Q9NZ81 148 aa3.46□□□□□ -1.86
SLIRP-208ENST00000556956 FBXL21Q9UKT6 434 aa3.46□□□□□ -1.86
SLIRP-208ENST00000556956 TNNQ9UQP3 1299 aa3.46□□□□□ -1.86
SLIRP-208ENST00000556956 PCDHB12Q9Y5F1 795 aa3.46□□□□□ -1.86
SLIRP-208ENST00000556956 SLC12A7Q9Y666 1083 aa3.46□□□□□ -1.86
SLIRP-208ENST00000556956 ABCC11Q96J66 1382 aa3.46□□□□□ -1.86
SLIRP-208ENST00000556956 ATP10BO94823 1461 aa3.46□□□□□ -1.86
SLIRP-208ENST00000556956 WASH4PA8MWX3 477 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 TNFRSF10CO14798 259 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 SIGLEC6O43699 453 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 DNAJA2O60884 412 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 FZD7O75084 574 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 U2AF1L5P0DN76 240 aaPredicted RBP3.45□□□□□ -1.86
SLIRP-208ENST00000556956 PDE6BP35913 854 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 KIR2DL1P43626 348 aaPredicted RBP3.45□□□□□ -1.86
SLIRP-208ENST00000556956 KIR2DL2P43627 348 aaPredicted RBP3.45□□□□□ -1.86
SLIRP-208ENST00000556956 NOP2P46087 812 aaKnown RBP3.45□□□□□ -1.86
SLIRP-208ENST00000556956 MTHFSP49914 203 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 FANCCQ00597 558 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 U2AF1Q01081 240 aaKnown RBP eCLIP3.45□□□□□ -1.86
SLIRP-208ENST00000556956 TEKQ02763 1124 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 CHAF1AQ13111 956 aaPredicted RBP3.45□□□□□ -1.86
SLIRP-208ENST00000556956 AUHQ13825 339 aaKnown RBP3.45□□□□□ -1.86
SLIRP-208ENST00000556956 SMN1Q16637 294 aaKnown RBP3.45□□□□□ -1.86
SLIRP-208ENST00000556956 LRCH2Q5VUJ6 765 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 OLFML2BQ68BL8 750 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 CWF19L1Q69YN2 538 aaKnown RBP3.45□□□□□ -1.86
SLIRP-208ENST00000556956 WAPLQ7Z5K2 1190 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 USHBP1Q8N6Y0 703 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 FAM184AQ8NB25 1140 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 RGS22Q8NE09 1264 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 SSH1Q8WYL5 1049 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 ARHGAP45Q92619 1136 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 TCTN2Q96GX1 697 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 EAF1Q96JC9 268 aaPredicted RBP3.45□□□□□ -1.86
SLIRP-208ENST00000556956 DIAPH3Q9NSV4 1193 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 TCFL5Q9UL49 500 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 NSD2O96028 1365 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 PLB1Q6P1J6 1458 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 ERCC6L2Q5T890 1561 aa3.45□□□□□ -1.86
SLIRP-208ENST00000556956 KIF24Q5T7B8 1368 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 SBNO2Q9Y2G9 1366 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 GOLGA6L6A8MZA4 724 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 ABLIM1O14639 778 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 ITGB3P05106 788 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 LMO1P25800 156 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 GTF2F1P35269 517 aaKnown RBP eCLIP3.44□□□□□ -1.86
SLIRP-208ENST00000556956 ARL4AP40617 200 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 TMPOP42166 694 aaKnown RBP3.44□□□□□ -1.86
SLIRP-208ENST00000556956 TMEM62Q0P6H9 643 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 TCEAL1Q15170 157 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 ANKRD39Q53RE8 183 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 NOL9Q5SY16 702 aaKnown RBP3.44□□□□□ -1.86
SLIRP-208ENST00000556956 EFCAB2Q5VUJ9 269 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 FBXW10Q5XX13 1052 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 CNKSR3Q6P9H4 555 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 FAM129CQ86XR2 697 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 PDCL2Q8N4E4 241 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 TAB3Q8N5C8 712 aaPredicted RBP3.44□□□□□ -1.86
SLIRP-208ENST00000556956 RBBP8NLQ8NC74 664 aaPredicted RBP3.44□□□□□ -1.86
SLIRP-208ENST00000556956 LINC01599Q8WXQ3 324 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 SLC6A18Q96N87 628 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 FEZ1Q99689 392 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 HDAC8Q9BY41 377 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 API5Q9BZZ5 524 aaKnown RBP3.44□□□□□ -1.86
SLIRP-208ENST00000556956 CHST7Q9NS84 486 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 TNFRSF10DQ9UBN6 386 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 SUCOQ9UBS9 1254 aaKnown RBP3.44□□□□□ -1.86
SLIRP-208ENST00000556956 GPR160Q9UJ42 338 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 DDX41Q9UJV9 622 aaKnown RBP3.44□□□□□ -1.86
SLIRP-208ENST00000556956 ZNRF3Q9ULT6 936 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 YBX2Q9Y2T7 364 aaKnown RBP3.44□□□□□ -1.86
SLIRP-208ENST00000556956 ZNF281Q9Y2X9 895 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 KIF3AQ9Y496 699 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 DUOX2Q9NRD8 1548 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 PTPRTO14522 1441 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 NSD3Q9BZ95 1437 aa3.44□□□□□ -1.86
SLIRP-208ENST00000556956 TTC37Q6PGP7 1564 aa3.43□□□□□ -1.86
SLIRP-208ENST00000556956 MAST1Q9Y2H9 1570 aa3.43□□□□□ -1.86
SLIRP-208ENST00000556956 ADGRL1O94910 1474 aa3.43□□□□□ -1.86
SLIRP-208ENST00000556956 IQSEC2Q5JU85 1478 aa3.43□□□□□ -1.86
SLIRP-208ENST00000556956 ZNF518AQ6AHZ1 1483 aa3.43□□□□□ -1.86
SLIRP-208ENST00000556956 A0A1W2PQ27 194 aa3.43□□□□□ -1.86
SLIRP-208ENST00000556956 A0A1W2PQ64 194 aa3.43□□□□□ -1.86
SLIRP-208ENST00000556956 A0A1W2PQC6 194 aa3.43□□□□□ -1.86
SLIRP-208ENST00000556956 A0A1W2PQD8 194 aa3.43□□□□□ -1.86
SLIRP-208ENST00000556956 SHISA3A0PJX4 238 aa3.43□□□□□ -1.86
SLIRP-208ENST00000556956 SYCE3A1L190 88 aa3.43□□□□□ -1.86
SLIRP-208ENST00000556956 WTIPA6NIX2 430 aaPredicted RBP3.43□□□□□ -1.86
SLIRP-208ENST00000556956 IRS4O14654 1257 aaPredicted RBP3.43□□□□□ -1.86
SLIRP-208ENST00000556956 U2SURPO15042 1029 aaKnown RBP3.43□□□□□ -1.86
SLIRP-208ENST00000556956 REC8O95072 547 aa3.43□□□□□ -1.86
SLIRP-208ENST00000556956 PRAMEF1O95521 474 aa3.43□□□□□ -1.86
SLIRP-208ENST00000556956 GSNP06396 782 aa3.43□□□□□ -1.86
SLIRP-208ENST00000556956 SYPP08247 313 aa3.43□□□□□ -1.86
SLIRP-208ENST00000556956 ZSCAN20P17040 1043 aaPredicted RBP3.43□□□□□ -1.86
SLIRP-208ENST00000556956 MCCP23508 829 aa3.43□□□□□ -1.86
SLIRP-208ENST00000556956 BMP8BP34820 402 aa3.43□□□□□ -1.86
SLIRP-208ENST00000556956 KCNC1P48547 511 aa3.43□□□□□ -1.86
SLIRP-208ENST00000556956 PMS1P54277 932 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms