RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 ARRDC4Q8NCT1 418 aa7.22□□□□□ -1.25
LINC00648-203ENST00000556923 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.22□□□□□ -1.25
LINC00648-203ENST00000556923 SGSM3Q96HU1 749 aa7.22□□□□□ -1.25
LINC00648-203ENST00000556923 ARHGEF4Q9NR80 690 aa7.22□□□□□ -1.25
LINC00648-203ENST00000556923 TCRBV5S2A0A599 114 aa7.21□□□□□ -1.26
LINC00648-203ENST00000556923 TADA3O75528 432 aa7.21□□□□□ -1.26
LINC00648-203ENST00000556923 RPL13P26373 211 aaKnown RBP7.21□□□□□ -1.26
LINC00648-203ENST00000556923 GJA9P57773 515 aa7.21□□□□□ -1.26
LINC00648-203ENST00000556923 LCE5AQ5TCM9 118 aa7.21□□□□□ -1.26
LINC00648-203ENST00000556923 USP53Q70EK8 1073 aa7.21□□□□□ -1.26
LINC00648-203ENST00000556923 FERMT3Q86UX7 667 aa7.21□□□□□ -1.26
LINC00648-203ENST00000556923 ADAMTS17Q8TE56 1095 aa7.21□□□□□ -1.26
LINC00648-203ENST00000556923 AARSD1Q9BTE6 412 aaKnown RBP7.21□□□□□ -1.26
LINC00648-203ENST00000556923 BDH2Q9BUT1 245 aa7.21□□□□□ -1.26
LINC00648-203ENST00000556923 KRTAP4-2Q9BYR5 136 aa7.21□□□□□ -1.26
LINC00648-203ENST00000556923 EPB41L1Q9H4G0 881 aa7.21□□□□□ -1.26
LINC00648-203ENST00000556923 GPR27Q9NS67 375 aa7.21□□□□□ -1.26
LINC00648-203ENST00000556923 PPARGC1AQ9UBK2 798 aaKnown RBP7.21□□□□□ -1.26
LINC00648-203ENST00000556923 PCDHB4Q9Y5E5 795 aa7.21□□□□□ -1.26
LINC00648-203ENST00000556923 DUSP10Q9Y6W6 482 aa7.21□□□□□ -1.26
LINC00648-203ENST00000556923 E9PSI1 815 aa7.2□□□□□ -1.26
LINC00648-203ENST00000556923 ST13P5Q8NFI4 369 aaPredicted RBP7.2□□□□□ -1.26
LINC00648-203ENST00000556923 DDX1Q92499 740 aaKnown RBP7.2□□□□□ -1.26
LINC00648-203ENST00000556923 YIPF4Q9BSR8 244 aa7.2□□□□□ -1.26
LINC00648-203ENST00000556923 PHF20Q9BVI0 1012 aa7.2□□□□□ -1.26
LINC00648-203ENST00000556923 LNPKQ9C0E8 428 aa7.2□□□□□ -1.26
LINC00648-203ENST00000556923 DTLQ9NZJ0 730 aa7.2□□□□□ -1.26
LINC00648-203ENST00000556923 IQCA1LA6NCM1 817 aa7.19□□□□□ -1.26
LINC00648-203ENST00000556923 PRODHO43272 600 aa7.19□□□□□ -1.26
LINC00648-203ENST00000556923 DGKIO75912 1065 aa7.19□□□□□ -1.26
LINC00648-203ENST00000556923 FGFR1P11362 822 aa7.19□□□□□ -1.26
LINC00648-203ENST00000556923 NKX3-2P78367 333 aa7.19□□□□□ -1.26
LINC00648-203ENST00000556923 ADAM9Q13443 819 aa7.19□□□□□ -1.26
LINC00648-203ENST00000556923 NTRK3Q16288 839 aa7.19□□□□□ -1.26
LINC00648-203ENST00000556923 PRR31Q5SQ13 230 aa7.19□□□□□ -1.26
LINC00648-203ENST00000556923 UBXN11Q5T124 520 aa7.19□□□□□ -1.26
LINC00648-203ENST00000556923 ERICH6BQ5W0A0 696 aa7.19□□□□□ -1.26
LINC00648-203ENST00000556923 TTLL6Q8N841 843 aa7.19□□□□□ -1.26
LINC00648-203ENST00000556923 OSBP2Q969R2 916 aa7.19□□□□□ -1.26
LINC00648-203ENST00000556923 TOE1Q96GM8 510 aaKnown RBP7.19□□□□□ -1.26
LINC00648-203ENST00000556923 NGRNQ9NPE2 291 aaKnown RBP7.19□□□□□ -1.26
LINC00648-203ENST00000556923 PABPC1P11940 636 aaKnown RBP7.18□□□□□ -1.26
LINC00648-203ENST00000556923 CNR2P34972 360 aa7.18□□□□□ -1.26
LINC00648-203ENST00000556923 KRTAP10-2P60368 255 aa7.18□□□□□ -1.26
LINC00648-203ENST00000556923 ZC3H6P61129 1189 aaKnown RBP7.18□□□□□ -1.26
LINC00648-203ENST00000556923 NAALADL2Q58DX5 795 aa7.18□□□□□ -1.26
LINC00648-203ENST00000556923 YOD1Q5VVQ6 348 aaPredicted RBP7.18□□□□□ -1.26
LINC00648-203ENST00000556923 TEPPQ6URK8 271 aa7.18□□□□□ -1.26
LINC00648-203ENST00000556923 KCNT2Q6UVM3 1135 aa7.18□□□□□ -1.26
LINC00648-203ENST00000556923 RSPO2Q6UXX9 243 aaPredicted RBP7.18□□□□□ -1.26
LINC00648-203ENST00000556923 JAM3Q9BX67 310 aa7.18□□□□□ -1.26
LINC00648-203ENST00000556923 KRTAP4-11Q9BYQ6 195 aa7.18□□□□□ -1.26
LINC00648-203ENST00000556923 TRIM55Q9BYV6 548 aa7.18□□□□□ -1.26
LINC00648-203ENST00000556923 MYOTQ9UBF9 498 aa7.18□□□□□ -1.26
LINC00648-203ENST00000556923 STK10O94804 968 aaKnown RBP7.17□□□□□ -1.26
LINC00648-203ENST00000556923 PLP2Q04941 152 aa7.17□□□□□ -1.26
LINC00648-203ENST00000556923 RGL3Q3MIN7 710 aa7.17□□□□□ -1.26
LINC00648-203ENST00000556923 PRRT2Q7Z6L0 340 aaPredicted RBP7.17□□□□□ -1.26
LINC00648-203ENST00000556923 DCAF4Q8WV16 495 aa7.17□□□□□ -1.26
LINC00648-203ENST00000556923 SMOC1Q9H4F8 434 aa7.17□□□□□ -1.26
LINC00648-203ENST00000556923 WASF3Q9UPY6 502 aa7.17□□□□□ -1.26
LINC00648-203ENST00000556923 MSRB2Q9Y3D2 182 aa7.17□□□□□ -1.26
LINC00648-203ENST00000556923 TRAV20A0A0B4J274 112 aa7.16□□□□□ -1.26
LINC00648-203ENST00000556923 BLACEA4D250 179 aa7.16□□□□□ -1.26
LINC00648-203ENST00000556923 LRG1P02750 347 aa7.16□□□□□ -1.26
LINC00648-203ENST00000556923 MCTP2Q6DN12 878 aa7.16□□□□□ -1.26
LINC00648-203ENST00000556923 NSMFQ6X4W1 530 aa7.16□□□□□ -1.26
LINC00648-203ENST00000556923 LBX2Q6XYB7 198 aa7.16□□□□□ -1.26
LINC00648-203ENST00000556923 LRRC47Q8N1G4 583 aaKnown RBP7.16□□□□□ -1.26
LINC00648-203ENST00000556923 PIP4K2CQ8TBX8 421 aa7.16□□□□□ -1.26
LINC00648-203ENST00000556923 PHOSPHO1Q8TCT1 267 aa7.16□□□□□ -1.26
LINC00648-203ENST00000556923 ZSWIM3Q96MP5 696 aa7.16□□□□□ -1.26
LINC00648-203ENST00000556923 SLC6A20Q9NP91 592 aa7.16□□□□□ -1.26
LINC00648-203ENST00000556923 ASH2LQ9UBL3 628 aa7.16□□□□□ -1.26
LINC00648-203ENST00000556923 KRIT1O00522 736 aa7.15□□□□□ -1.26
LINC00648-203ENST00000556923 DDX3XO00571 662 aaKnown RBP eCLIP7.15□□□□□ -1.26
LINC00648-203ENST00000556923 NFKB2Q00653 900 aa7.15□□□□□ -1.26
LINC00648-203ENST00000556923 FAM26FQ5R3K3 315 aa7.15□□□□□ -1.26
LINC00648-203ENST00000556923 CYP4F22Q6NT55 531 aa7.15□□□□□ -1.26
LINC00648-203ENST00000556923 SPATC1Q76KD6 591 aa7.15□□□□□ -1.26
LINC00648-203ENST00000556923 CKAP2LQ8IYA6 745 aa7.15□□□□□ -1.26
LINC00648-203ENST00000556923 ZNF669Q96BR6 464 aaPredicted RBP7.15□□□□□ -1.26
LINC00648-203ENST00000556923 PODXL2Q9NZ53 605 aa7.15□□□□□ -1.26
LINC00648-203ENST00000556923 SLC27A2O14975 620 aa7.14□□□□□ -1.27
LINC00648-203ENST00000556923 MAFKO60675 156 aa7.14□□□□□ -1.27
LINC00648-203ENST00000556923 ZNF28P17035 718 aa7.14□□□□□ -1.27
LINC00648-203ENST00000556923 GRK2P25098 689 aa7.14□□□□□ -1.27
LINC00648-203ENST00000556923 GRK3P35626 688 aa7.14□□□□□ -1.27
LINC00648-203ENST00000556923 EFEMP1Q12805 493 aa7.14□□□□□ -1.27
LINC00648-203ENST00000556923 IFRD2Q12894 506 aaPredicted RBP7.14□□□□□ -1.27
LINC00648-203ENST00000556923 STYK1Q6J9G0 422 aa7.14□□□□□ -1.27
LINC00648-203ENST00000556923 TXNDC5Q8NBS9 432 aaKnown RBP7.14□□□□□ -1.27
LINC00648-203ENST00000556923 ZFYVE21Q9BQ24 234 aa7.14□□□□□ -1.27
LINC00648-203ENST00000556923 RBPJLQ9UBG7 517 aa7.14□□□□□ -1.27
LINC00648-203ENST00000556923 ASXL2Q76L83 1435 aa7.13□□□□□ -1.27
LINC00648-203ENST00000556923 KIZQ2M2Z5 673 aa7.13□□□□□ -1.27
LINC00648-203ENST00000556923 OTOP3Q7RTS5 596 aa7.13□□□□□ -1.27
LINC00648-203ENST00000556923 RBM12BQ8IXT5 1001 aaKnown RBP7.13□□□□□ -1.27
LINC00648-203ENST00000556923 TTLL11Q8NHH1 800 aa7.13□□□□□ -1.27
LINC00648-203ENST00000556923 SPATA9Q9BWV2 254 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms