RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 SH2B1Q9NRF2 756 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-214ENST00000556771 DDX41Q9UJV9 622 aaKnown RBP12.09□□□□□ -0.47
MTHFD1-214ENST00000556771 MROH7Q68CQ1 1323 aa12.09□□□□□ -0.47
MTHFD1-214ENST00000556771 A6NJR5 290 aa12.08□□□□□ -0.48
MTHFD1-214ENST00000556771 MAFGO15525 162 aa12.08□□□□□ -0.48
MTHFD1-214ENST00000556771 ST18O60284 1047 aa12.08□□□□□ -0.48
MTHFD1-214ENST00000556771 RGS20O76081 388 aa12.08□□□□□ -0.48
MTHFD1-214ENST00000556771 ARIH2O95376 493 aa12.08□□□□□ -0.48
MTHFD1-214ENST00000556771 SREBF1P36956 1147 aa12.08□□□□□ -0.48
MTHFD1-214ENST00000556771 MRPS9P82933 396 aaKnown RBP12.08□□□□□ -0.48
MTHFD1-214ENST00000556771 LAMC2Q13753 1193 aa12.08□□□□□ -0.48
MTHFD1-214ENST00000556771 ME3Q16798 604 aa12.08□□□□□ -0.48
MTHFD1-214ENST00000556771 LRRC26Q2I0M4 334 aa12.08□□□□□ -0.48
MTHFD1-214ENST00000556771 GIMAP8Q8ND71 665 aaPredicted RBP12.08□□□□□ -0.48
MTHFD1-214ENST00000556771 GPRASP2Q96D09 838 aa12.08□□□□□ -0.48
MTHFD1-214ENST00000556771 TBC1D32Q96NH3 1257 aa12.08□□□□□ -0.48
MTHFD1-214ENST00000556771 ANO3Q9BYT9 981 aa12.08□□□□□ -0.48
MTHFD1-214ENST00000556771 BRCA2P51587 3418 aa12.08□□□□□ -0.48
MTHFD1-214ENST00000556771 ALPK3Q96L96 1907 aa12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 A0A0U1RQG5 324 aaPredicted RBP12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 SPATA31C2B4DYI2 1134 aa12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 FXR2P51116 673 aaKnown RBP eCLIP12.07□□□□□ -0.487e-7■■■■□ 22.4
MTHFD1-214ENST00000556771 ATN1P54259 1190 aaPredicted RBP12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 RTP1P59025 263 aa12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 NLRP5P59047 1200 aa12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 BEX3Q00994 111 aa12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 ARHGAP1Q07960 439 aa12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 NEDD9Q14511 834 aa12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 LY6KQ17RY6 165 aa12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 CELF3Q5SZQ8 465 aaKnown RBP12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 DHX37Q8IY37 1157 aaKnown RBP12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 DAGLBQ8NCG7 672 aa12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 PPTC7Q8NI37 304 aa12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 FERMT2Q96AC1 680 aa12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 VTI1AQ96AJ9 217 aa12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 TOX2Q96NM4 488 aa12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 SENP7Q9BQF6 1050 aa12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 BACH2Q9BYV9 841 aa12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 VPS54Q9P1Q0 977 aa12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 ORC3Q9UBD5 711 aaPredicted RBP12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 UBIAD1Q9Y5Z9 338 aa12.07□□□□□ -0.48
MTHFD1-214ENST00000556771 LARGE1O95461 756 aa12.06□□□□□ -0.48
MTHFD1-214ENST00000556771 CHRM1P11229 460 aaPredicted RBP12.06□□□□□ -0.48
MTHFD1-214ENST00000556771 UBA1P22314 1058 aaKnown RBP12.06□□□□□ -0.48
MTHFD1-214ENST00000556771 MCM2P49736 904 aa12.06□□□□□ -0.48
MTHFD1-214ENST00000556771 PURAQ00577 322 aaKnown RBP12.06□□□□□ -0.48
MTHFD1-214ENST00000556771 DGKDQ16760 1214 aa12.06□□□□□ -0.48
MTHFD1-214ENST00000556771 TMEM63BQ5T3F8 832 aa12.06□□□□□ -0.48
MTHFD1-214ENST00000556771 CXCL17Q6UXB2 119 aa12.06□□□□□ -0.48
MTHFD1-214ENST00000556771 NIPA1Q7RTP0 329 aa12.06□□□□□ -0.48
MTHFD1-214ENST00000556771 ANKRD33Q7Z3H0 272 aa12.06□□□□□ -0.48
MTHFD1-214ENST00000556771 C7orf61Q8IZ16 206 aa12.06□□□□□ -0.48
MTHFD1-214ENST00000556771 COPS5Q92905 334 aa12.06□□□□□ -0.48
MTHFD1-214ENST00000556771 LLPHQ9BRT6 129 aaKnown RBP12.06□□□□□ -0.48
MTHFD1-214ENST00000556771 MTG1Q9BT17 334 aaPredicted RBP12.06□□□□□ -0.48
MTHFD1-214ENST00000556771 JADE2Q9NQC1 790 aa12.06□□□□□ -0.48
MTHFD1-214ENST00000556771 PCDHA4Q9UN74 947 aa12.06□□□□□ -0.48
MTHFD1-214ENST00000556771 DCDC2CA8MYV0 355 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 ARVCFO00192 962 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 PPFIA3O75145 1194 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 CTDNEP1O95476 244 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 GGPS1O95749 300 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 MMP3P08254 477 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 MYL3P08590 195 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 CYP3A4P08684 503 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 HOXD8P13378 290 aaPredicted RBP12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 IRX5P78411 483 aaPredicted RBP12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 ARHGAP4P98171 946 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 MTMR1Q13613 665 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 TRIM60Q495X7 471 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 MYSM1Q5VVJ2 828 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 JAKMIP3Q5VZ66 844 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 METTL7BQ6UX53 244 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 BLIDQ8IZY5 108 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 NECAB1Q8N987 351 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 SLC43A3Q8NBI5 491 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 NSUN7Q8NE18 718 aaKnown RBP12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 AFG1LQ8WV93 481 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 SPATA33Q96N06 139 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 MXRA8Q9BRK3 442 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 MLXIPQ9HAP2 919 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 RTEL1Q9NZ71 1219 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 PRKAG2Q9UGJ0 569 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 ATP11BQ9Y2G3 1177 aa12.05□□□□□ -0.48
MTHFD1-214ENST00000556771 H0YGN5 161 aa12.04□□□□□ -0.48
MTHFD1-214ENST00000556771 RIOK3O14730 519 aaKnown RBP12.04□□□□□ -0.48
MTHFD1-214ENST00000556771 TLR3O15455 904 aaKnown RBP12.04□□□□□ -0.48
MTHFD1-214ENST00000556771 PPFIA4O75335 1185 aa12.04□□□□□ -0.48
MTHFD1-214ENST00000556771 ITGB5P18084 799 aa12.04□□□□□ -0.48
MTHFD1-214ENST00000556771 PTGS1P23219 599 aa12.04□□□□□ -0.48
MTHFD1-214ENST00000556771 ZNF76P36508 570 aa12.04□□□□□ -0.48
MTHFD1-214ENST00000556771 CDK7P50613 346 aa12.04□□□□□ -0.48
MTHFD1-214ENST00000556771 HMGN5P82970 282 aaKnown RBP12.04□□□□□ -0.48
MTHFD1-214ENST00000556771 SETQ01105 290 aaPredicted RBP12.04□□□□□ -0.48
MTHFD1-214ENST00000556771 SEMA3FQ13275 785 aa12.04□□□□□ -0.48
MTHFD1-214ENST00000556771 ITGA7Q13683 1181 aa12.04□□□□□ -0.48
MTHFD1-214ENST00000556771 CEP55Q53EZ4 464 aa12.04□□□□□ -0.48
MTHFD1-214ENST00000556771 CRYGNQ8WXF5 182 aa12.04□□□□□ -0.48
MTHFD1-214ENST00000556771 PGBD1Q96JS3 809 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms