RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 RCOR1Q9UKL0 485 aa12.77□□□□□ -0.37
FOXN3-212ENST00000556541 PCDHB6Q9Y5E3 794 aa12.77□□□□□ -0.37
FOXN3-212ENST00000556541 WDR81Q562E7 1941 aa12.77□□□□□ -0.37
FOXN3-212ENST00000556541 ELP1O95163 1332 aa12.77□□□□□ -0.37
FOXN3-212ENST00000556541 SLC26A4O43511 780 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 TDP2O95551 362 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 MYCLP12524 364 aaPredicted RBP12.76□□□□□ -0.37
FOXN3-212ENST00000556541 CYP2B6P20813 491 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 NKX3-2P78367 333 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 MTMR1Q13613 665 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 SF3A1Q15459 793 aaKnown RBP12.76□□□□□ -0.37
FOXN3-212ENST00000556541 CSPP1Q1MSJ5 1256 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 IQSEC1Q6DN90 963 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 TAPT1Q6NXT6 567 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 CCDC62Q6P9F0 684 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 CTU1Q7Z7A3 348 aaKnown RBP12.76□□□□□ -0.37
FOXN3-212ENST00000556541 PLA2G4DQ86XP0 818 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 TMEM87AQ8NBN3 555 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 LINC00301Q8NCQ3 95 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 KCNG4Q8TDN1 519 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 TRIB2Q92519 343 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 TNPO1Q92973 898 aaKnown RBP12.76□□□□□ -0.37
FOXN3-212ENST00000556541 EMID1Q96A84 441 aaPredicted RBP12.76□□□□□ -0.37
FOXN3-212ENST00000556541 FERMT2Q96AC1 680 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 KCNH7Q9NS40 1196 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 TBC1D22BQ9NU19 505 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 FLRT1Q9NZU1 646 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 CNPY2Q9Y2B0 182 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 PTPN22Q9Y2R2 807 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 Q9Y3F1 56 aa12.76□□□□□ -0.37
FOXN3-212ENST00000556541 WNT7AO00755 349 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 MSH4O15457 936 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 SLC37A4O43826 429 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 ADCY3O60266 1144 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 BAG4O95429 457 aaKnown RBP12.75□□□□□ -0.37
FOXN3-212ENST00000556541 OR52Z1P0C646 297 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 ZNF865P0CJ78 1059 aaPredicted RBP12.75□□□□□ -0.37
FOXN3-212ENST00000556541 CYBAP13498 195 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 CAPN2P17655 700 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 MCM7P33993 719 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 FXR2P51116 673 aaKnown RBP eCLIP12.75□□□□□ -0.37
FOXN3-212ENST00000556541 LBX1P52954 281 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 DNM1Q05193 864 aaKnown RBP12.75□□□□□ -0.37
FOXN3-212ENST00000556541 PTGDRQ13258 359 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 SEMA3FQ13275 785 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 ACVR2BQ13705 512 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 NEDD9Q14511 834 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 TTLL4Q14679 1199 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 CALCRLQ16602 461 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 PRR16Q569H4 304 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 FRMPD3Q5JV73 1810 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 B3GNT9Q6UX72 402 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 LOXHD1Q8IVV2 1947 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 RDM1Q8NG50 284 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 RAET1EQ8TD07 263 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 HAS1Q92839 578 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 ABHD8Q96I13 439 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 AGO4Q9HCK5 861 aaKnown RBP12.75□□□□□ -0.37
FOXN3-212ENST00000556541 TRIM17Q9Y577 477 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 STK24Q9Y6E0 443 aa12.75□□□□□ -0.37
FOXN3-212ENST00000556541 IPO5O00410 1097 aaKnown RBP12.74□□□□□ -0.37
FOXN3-212ENST00000556541 PSMD10O75832 226 aa12.74□□□□□ -0.37
FOXN3-212ENST00000556541 KCNA2P16389 499 aa12.74□□□□□ -0.37
FOXN3-212ENST00000556541 GRK4P32298 578 aa12.74□□□□□ -0.37
FOXN3-212ENST00000556541 UBXN2AP68543 259 aa12.74□□□□□ -0.37
FOXN3-212ENST00000556541 PPP2R5CQ13362 524 aa12.74□□□□□ -0.37
FOXN3-212ENST00000556541 PDIA5Q14554 519 aa12.74□□□□□ -0.37
FOXN3-212ENST00000556541 ZNF174Q15697 407 aa12.74□□□□□ -0.37
FOXN3-212ENST00000556541 CCL14Q16627 93 aa12.74□□□□□ -0.37
FOXN3-212ENST00000556541 DUSP28Q4G0W2 176 aa12.74□□□□□ -0.37
FOXN3-212ENST00000556541 FAM173BQ6P4H8 233 aa12.74□□□□□ -0.37
FOXN3-212ENST00000556541 FBXO46Q6PJ61 603 aaPredicted RBP12.74□□□□□ -0.37
FOXN3-212ENST00000556541 POTEDQ86YR6 584 aa12.74□□□□□ -0.37
FOXN3-212ENST00000556541 KCTD17Q8N5Z5 321 aa12.74□□□□□ -0.37
FOXN3-212ENST00000556541 ZNF579Q8NAF0 562 aaKnown RBP12.74□□□□□ -0.37
FOXN3-212ENST00000556541 CYP2W1Q8TAV3 490 aa12.74□□□□□ -0.37
FOXN3-212ENST00000556541 AK8Q96MA6 479 aa12.74□□□□□ -0.37
FOXN3-212ENST00000556541 RAB34Q9BZG1 259 aa12.74□□□□□ -0.37
FOXN3-212ENST00000556541 WDR11Q9BZH6 1224 aa12.74□□□□□ -0.37
FOXN3-212ENST00000556541 TSKSQ9UJT2 592 aa12.74□□□□□ -0.37
FOXN3-212ENST00000556541 DDX41Q9UJV9 622 aaKnown RBP12.74□□□□□ -0.37
FOXN3-212ENST00000556541 SRPRBQ9Y5M8 271 aaKnown RBP12.74□□□□□ -0.37
FOXN3-212ENST00000556541 CLIC4Q9Y696 253 aa12.74□□□□□ -0.37
FOXN3-212ENST00000556541 DOCK5Q9H7D0 1870 aa12.74□□□□□ -0.37
FOXN3-212ENST00000556541 SPTLC2O15270 562 aa12.73□□□□□ -0.37
FOXN3-212ENST00000556541 DHX15O43143 795 aaKnown RBP12.73□□□□□ -0.37
FOXN3-212ENST00000556541 SEPT4O43236 478 aa12.73□□□□□ -0.37
FOXN3-212ENST00000556541 MSCO60682 206 aa12.73□□□□□ -0.37
FOXN3-212ENST00000556541 ARP10275 920 aa12.73□□□□□ -0.37
FOXN3-212ENST00000556541 AKR1A1P14550 325 aa12.73□□□□□ -0.37
FOXN3-212ENST00000556541 KRT76Q01546 638 aa12.73□□□□□ -0.37
FOXN3-212ENST00000556541 ZNF746Q6NUN9 644 aaPredicted RBP12.73□□□□□ -0.37
FOXN3-212ENST00000556541 IGSF22Q8N9C0 903 aa12.73□□□□□ -0.37
FOXN3-212ENST00000556541 LEO1Q8WVC0 666 aaPredicted RBP12.73□□□□□ -0.37
FOXN3-212ENST00000556541 GBP4Q96PP9 640 aa12.73□□□□□ -0.37
FOXN3-212ENST00000556541 ZNF577Q9BSK1 485 aa12.73□□□□□ -0.37
FOXN3-212ENST00000556541 TMEM60Q9H2L4 133 aa12.73□□□□□ -0.37
FOXN3-212ENST00000556541 FAM184BQ9ULE4 1060 aa12.73□□□□□ -0.37
FOXN3-212ENST00000556541 MRVI1Q9Y6F6 885 aa12.73□□□□□ -0.37
FOXN3-212ENST00000556541 HOXD8P13378 290 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms