RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CPVLQ9H3G5 476 aa16.31■□□□□ 0.2
ACTN1-219ENST00000556432 MUTYHQ9UIF7 546 aa16.31■□□□□ 0.2
ACTN1-219ENST00000556432 DDX41Q9UJV9 622 aaKnown RBP16.31■□□□□ 0.2
ACTN1-219ENST00000556432 MICAL3Q7RTP6 2002 aa16.31■□□□□ 0.2
ACTN1-219ENST00000556432 ABCB11O95342 1321 aa16.3■□□□□ 0.2
ACTN1-219ENST00000556432 CSPG5O95196 566 aa16.3■□□□□ 0.2
ACTN1-219ENST00000556432 CDC37Q16543 378 aaPredicted RBP16.3■□□□□ 0.2
ACTN1-219ENST00000556432 MCF2L2Q86YR7 1114 aa16.3■□□□□ 0.2
ACTN1-219ENST00000556432 SEPT8Q92599 483 aa16.3■□□□□ 0.2
ACTN1-219ENST00000556432 TBC1D5Q92609 795 aa16.3■□□□□ 0.2
ACTN1-219ENST00000556432 IFIH1Q9BYX4 1025 aaKnown RBP16.3■□□□□ 0.2
ACTN1-219ENST00000556432 UBA5Q9GZZ9 404 aa16.3■□□□□ 0.2
ACTN1-219ENST00000556432 DCTPP1Q9H773 170 aa16.3■□□□□ 0.2
ACTN1-219ENST00000556432 TCP11L1Q9NUJ3 509 aa16.3■□□□□ 0.2
ACTN1-219ENST00000556432 COL20A1Q9P218 1284 aa16.3■□□□□ 0.2
ACTN1-219ENST00000556432 ZNF318Q5VUA4 2279 aa16.3■□□□□ 0.2
ACTN1-219ENST00000556432 MYO7AQ13402 2215 aa16.29■□□□□ 0.2
ACTN1-219ENST00000556432 C19orf67A6NJJ6 358 aa16.29■□□□□ 0.2
ACTN1-219ENST00000556432 HAS3O00219 553 aa16.29■□□□□ 0.2
ACTN1-219ENST00000556432 NCK2O43639 380 aa16.29■□□□□ 0.2
ACTN1-219ENST00000556432 DHX16O60231 1041 aaKnown RBP16.29■□□□□ 0.2
ACTN1-219ENST00000556432 CTSHP09668 335 aa16.29■□□□□ 0.2
ACTN1-219ENST00000556432 CTNNB1P35222 781 aa16.29■□□□□ 0.2
ACTN1-219ENST00000556432 PLEKHG4Q58EX7 1191 aa16.29■□□□□ 0.2
ACTN1-219ENST00000556432 GPATCH4Q5T3I0 446 aaKnown RBP16.29■□□□□ 0.2
ACTN1-219ENST00000556432 PI4K2BQ8TCG2 481 aa16.29■□□□□ 0.2
ACTN1-219ENST00000556432 ATP6V0A1Q93050 837 aa16.29■□□□□ 0.2
ACTN1-219ENST00000556432 EMID1Q96A84 441 aaPredicted RBP16.29■□□□□ 0.2
ACTN1-219ENST00000556432 SPATA33Q96N06 139 aa16.29■□□□□ 0.2
ACTN1-219ENST00000556432 EIF3JO75822 258 aaKnown RBP16.28■□□□□ 0.2
ACTN1-219ENST00000556432 HAND2P61296 217 aa16.28■□□□□ 0.2
ACTN1-219ENST00000556432 SERINC5Q86VE9 423 aa16.28■□□□□ 0.2
ACTN1-219ENST00000556432 OTUD7AQ8TE49 926 aaPredicted RBP16.28■□□□□ 0.2
ACTN1-219ENST00000556432 PHOX2BQ99453 314 aa16.28■□□□□ 0.2
ACTN1-219ENST00000556432 KIAA1217Q5T5P2 1943 aa16.27■□□□□ 0.2
ACTN1-219ENST00000556432 C17orf102A2RUQ5 167 aa16.27■□□□□ 0.2
ACTN1-219ENST00000556432 NR3C2P08235 984 aa16.27■□□□□ 0.2
ACTN1-219ENST00000556432 FGRP09769 529 aa16.27■□□□□ 0.2
ACTN1-219ENST00000556432 SNHG28P0DPA3 235 aa16.27■□□□□ 0.2
ACTN1-219ENST00000556432 MKRN4PQ13434 485 aaPredicted RBP16.27■□□□□ 0.2
ACTN1-219ENST00000556432 HIC1Q14526 733 aa16.27■□□□□ 0.2
ACTN1-219ENST00000556432 COL19A1Q14993 1142 aa16.27■□□□□ 0.2
ACTN1-219ENST00000556432 ALX1Q15699 326 aa16.27■□□□□ 0.2
ACTN1-219ENST00000556432 C20orf194Q5TEA3 1177 aa16.27■□□□□ 0.2
ACTN1-219ENST00000556432 RNF135Q8IUD6 432 aa16.27■□□□□ 0.2
ACTN1-219ENST00000556432 FIBCD1Q8N539 461 aa16.27■□□□□ 0.2
ACTN1-219ENST00000556432 TOP1MTQ969P6 601 aa16.27■□□□□ 0.2
ACTN1-219ENST00000556432 TTC14Q96N46 770 aa16.27■□□□□ 0.2
ACTN1-219ENST00000556432 IGFLR1Q9H665 355 aa16.27■□□□□ 0.2
ACTN1-219ENST00000556432 MRPL11Q9Y3B7 192 aaKnown RBP16.27■□□□□ 0.2
ACTN1-219ENST00000556432 PPFIA4O75335 1185 aa16.26■□□□□ 0.19
ACTN1-219ENST00000556432 CFBP00751 764 aa16.26■□□□□ 0.19
ACTN1-219ENST00000556432 FGAP02671 866 aa16.26■□□□□ 0.19
ACTN1-219ENST00000556432 MYCLP12524 364 aaPredicted RBP16.26■□□□□ 0.19
ACTN1-219ENST00000556432 MX1P20591 662 aa16.26■□□□□ 0.19
ACTN1-219ENST00000556432 PTPN5P54829 565 aa16.26■□□□□ 0.19
ACTN1-219ENST00000556432 SMAD2Q15796 467 aaKnown RBP16.26■□□□□ 0.19
ACTN1-219ENST00000556432 HERC4Q5GLZ8 1057 aaPredicted RBP16.26■□□□□ 0.19
ACTN1-219ENST00000556432 MFSD6Q6ZSS7 791 aa16.26■□□□□ 0.19
ACTN1-219ENST00000556432 ZKSCAN3Q9BRR0 538 aa16.26■□□□□ 0.19
ACTN1-219ENST00000556432 C11orf84Q9BUA3 381 aaPredicted RBP16.26■□□□□ 0.19
ACTN1-219ENST00000556432 MAF1Q9H063 256 aa16.26■□□□□ 0.19
ACTN1-219ENST00000556432 PXMP2Q9NR77 195 aa16.26■□□□□ 0.19
ACTN1-219ENST00000556432 STXBP3O00186 592 aa16.25■□□□□ 0.19
ACTN1-219ENST00000556432 MBTPS2O43462 519 aa16.25■□□□□ 0.19
ACTN1-219ENST00000556432 GGPS1O95749 300 aa16.25■□□□□ 0.19
ACTN1-219ENST00000556432 HSPD1P10809 573 aaKnown RBP16.25■□□□□ 0.19
ACTN1-219ENST00000556432 LTBRP36941 435 aa16.25■□□□□ 0.19
ACTN1-219ENST00000556432 SMAD4Q13485 552 aaKnown RBP16.25■□□□□ 0.19
ACTN1-219ENST00000556432 CELF3Q5SZQ8 465 aaKnown RBP16.25■□□□□ 0.19
ACTN1-219ENST00000556432 ADGRF4Q8IZF3 695 aa16.25■□□□□ 0.19
ACTN1-219ENST00000556432 IL17RAQ96F46 866 aa16.25■□□□□ 0.19
ACTN1-219ENST00000556432 RCAN3Q9UKA8 241 aa16.25■□□□□ 0.19
ACTN1-219ENST00000556432 TRIOO75962 3097 aa16.25■□□□□ 0.19
ACTN1-219ENST00000556432 NLRC5Q86WI3 1866 aa16.25■□□□□ 0.19
ACTN1-219ENST00000556432 CCDC171Q6TFL3 1326 aa16.24■□□□□ 0.19
ACTN1-219ENST00000556432 SMIM10L2AP0DMW4 78 aa16.24■□□□□ 0.19
ACTN1-219ENST00000556432 SMIM10L2BP0DMW5 78 aa16.24■□□□□ 0.19
ACTN1-219ENST00000556432 HOXD8P13378 290 aaPredicted RBP16.24■□□□□ 0.19
ACTN1-219ENST00000556432 DLX2Q07687 328 aaPredicted RBP16.24■□□□□ 0.19
ACTN1-219ENST00000556432 HYAL1Q12794 435 aa16.24■□□□□ 0.19
ACTN1-219ENST00000556432 QRICH1Q2TAL8 776 aa16.24■□□□□ 0.19
ACTN1-219ENST00000556432 HSDL1Q3SXM5 330 aa16.24■□□□□ 0.19
ACTN1-219ENST00000556432 MYSM1Q5VVJ2 828 aa16.24■□□□□ 0.19
ACTN1-219ENST00000556432 SUGP1Q8IWZ8 645 aaKnown RBP16.24■□□□□ 0.19
ACTN1-219ENST00000556432 PRSS33Q8NF86 280 aa16.24■□□□□ 0.19
ACTN1-219ENST00000556432 PBXIP1Q96AQ6 731 aa16.24■□□□□ 0.19
ACTN1-219ENST00000556432 LMAN2LQ9H0V9 348 aa16.24■□□□□ 0.19
ACTN1-219ENST00000556432 MLXIPQ9HAP2 919 aa16.24■□□□□ 0.19
ACTN1-219ENST00000556432 VAT1LQ9HCJ6 419 aa16.24■□□□□ 0.19
ACTN1-219ENST00000556432 HELLSQ9NRZ9 838 aa16.24■□□□□ 0.19
ACTN1-219ENST00000556432 ZBTB47Q9UFB7 747 aaPredicted RBP16.24■□□□□ 0.19
ACTN1-219ENST00000556432 CD207Q9UJ71 328 aa16.24■□□□□ 0.19
ACTN1-219ENST00000556432 C5orf42Q9H799 3197 aa16.24■□□□□ 0.19
ACTN1-219ENST00000556432 MYH7BA7E2Y1 1941 aa16.23■□□□□ 0.19
ACTN1-219ENST00000556432 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.23■□□□□ 0.19
ACTN1-219ENST00000556432 GRM6O15303 877 aa16.23■□□□□ 0.19
ACTN1-219ENST00000556432 TREHO43280 583 aa16.23■□□□□ 0.19
ACTN1-219ENST00000556432 ST18O60284 1047 aa16.23■□□□□ 0.19
ACTN1-219ENST00000556432 NDUFV1P49821 464 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms